FFCP PHASE1:Hg19::chr19:36245605..36245616,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C339 | |||
|description=CAGE_peak_at_chr19:36245605..36245616,+ | |||
|id=chr19:36245605..36245616,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.41e-15!180;CL:0000136!2.73e-15!15;CL:0000680!6.74e-11!57;CL:0000056!6.74e-11!57;CL:0000355!6.74e-11!57;CL:0000057!1.10e-10!75;CL:0000187!2.18e-10!54;CL:0000183!2.40e-10!59;CL:0002334!1.79e-09!12;CL:0000393!2.06e-08!60;CL:0000211!2.06e-08!60;CL:0000192!2.64e-08!42;CL:0000514!2.64e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.79e-17;13!CL:0002615;3.02e-10;3!CL:0002579;1.09e-09;3!CL:0002195;2.34e-07;2!CL:0002571;2.34e-07;2!CL:0002561;2.77e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.26e-22,15;CL:0002615,3.55e-10,3;CL:0002579,2.04e-09,3;CL:0002195,2.32e-07,2;CL:0002571,2.32e-07,2;CL:0002561,2.78e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.40e-10;3!DOID:127;2.40e-10;3!DOID:0060072;7.73e-08;4!DOID:114;7.00e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.32e-10,3;DOID:127,2.32e-10,3;DOID:0060072,7.53e-08,4;DOID:114,9.17e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.52e-14!63;UBERON:0001015!1.52e-14!63;UBERON:0000383!1.52e-14!63;UBERON:0001134!1.72e-13!61;UBERON:0002036!1.72e-13!61;UBERON:0003082!1.72e-13!61;UBERON:0004290!3.59e-12!70;UBERON:0000914!5.61e-11!83;UBERON:0002329!5.61e-11!83;UBERON:0003077!5.61e-11!83;UBERON:0003059!5.61e-11!83;UBERON:0007282!5.61e-11!83;UBERON:0009618!5.61e-11!83;UBERON:0007285!5.61e-11!83;UBERON:0000486!3.63e-10!82;UBERON:0001013!1.27e-09!14;UBERON:0005256!4.46e-09!143;UBERON:0000475!8.74e-09!365;UBERON:0003688!6.53e-08!6;UBERON:0002358!6.53e-08!6;UBERON:0003684!6.53e-08!6;UBERON:0001178!6.53e-08!6;UBERON:0001135!7.78e-08!15;UBERON:0002100!4.01e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.23e-18;6!UBERON:0002358;3.23e-18;6!UBERON:0003684;3.23e-18;6!UBERON:0001178;3.23e-18;6!UBERON:0004457;3.41e-16;9!UBERON:0000042;3.41e-16;9!UBERON:0001013;1.98e-12;14!UBERON:0005933;2.77e-07;2!UBERON:0005942;2.77e-07;2!UBERON:0005932;2.77e-07;2!UBERON:0005406;8.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.10e-18,6;UBERON:0002358,7.10e-18,6;UBERON:0003684,7.10e-18,6;UBERON:0001178,7.10e-18,6;UBERON:0001013,1.73e-12,14;UBERON:0004457,1.20e-11,12;UBERON:0000042,1.20e-11,12;UBERON:0005256,3.65e-08,122;UBERON:0002100,2.63e-07,199;UBERON:0005933,2.78e-07,2;UBERON:0005942,2.78e-07,2;UBERON:0005932,2.78e-07,2;UBERON:0007503,2.82e-07,78;UBERON:0005406,5.40e-07,2;UBERON:0005090,8.65e-07,2;UBERON:0001630,8.65e-07,2 | |||
|phase1_expression=1.2717486548939,1.71280419112787,3.10099689011137,2.00146596706261,7.15137751083661,1.74467704820074,2.53299878168311,0.631719873426831,5.48489819219661,0,1.39560233594486,0,0,0.123766352960047,0.994192127183747,0.672325146451775,0.602694528023977,1.46062018077475,0.975865597581014,0.123121058076788,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,0,1.15877215168659,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0.506522046658319,0.397227542439656,0.573673241497627,1.06400514659507,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0.234321431833797,1.5608003841516,0,1.94283284717341,0,0,0,0,0.122834317311768,0.309977343527296,0,0,0,5.03032699271367,0.168336113954066,0,0,0,0.30648779579902,0,0.226864366320042,0,0.427114777637135,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0.292311015483596,0,0.368199594569197,0.161646056818812,0,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,2.78620756819187,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,3.57656445851882,0,1.59562869950922,0,0.257207374262142,0,0,5.43316375900961,11.3950537132203,0,0,2.84313558994037,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,4.50153468953709,0.271265023699736,0,0.356857977594324,0,0,0.300946099727719,0,0,0,0,0.955719759148911,0.979005787313703,0.343143423810856,0,0,0,0,0,0,0.744323423456331,0.306923946576125,0.841980283299221,2.05022638809122,1.02341449813341,4.3430558708774,2.96836132889982,0.462629081407967,1.77561725313127,0.410635780069046,0,0.813472649219715,0,0,0,0,0.182091168006717,1.70461739447251,0,0,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.290012154876366,0.308097234229289,0,0.137836572484531,0.214840489736547,0.580066775656914,0.255679882248303,0.712256285173899,0,0,0,0,6.507837690162,0.31481234683064,0.6970372701606,0,0,0,0,0,0.744316738719335,0,1.33441135746677,1.79128453917934,1.28381696410176,0.318203247925937,0,1.07923474549989,0.823611089208164,0.706874414074119,0,0,0,0.975267478179181,0.487426979262569,0,0.272999822815972,1.27264888758341,0,0,0,0,5.78775534266688,0.655894752046633,0,0.30982349809975,0,1.86434757865267,1.27723753317057,0,1.06428319221179,5.06658324714394,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,1.0319161948297,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0.687481272035051,0,1.19807400299395,3.86303443322914,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.35857467866569,0,0,0,0,5.97299561929084,4.32110745600634,3.26587360109409,0,0,1.02232813071253,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0.544017803369474,1.0027595760908,0.306345576763462,0.655745261419609,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,1.10961172300523,0.757612021100357,0.251567901752575,0.889811221596536,0.686520205190771,1.81477108515887,0.466311601748341,0.295710299979268,0,0,0.310525913752519,0.829412415681711,0,0.521745061811734,0,0,0,0.181848659202559,0,0.464033759878494,0.398095888698616,0,3.09056134664514,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0.0788617450012534,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,2.97726707033577,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.214429632529969,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,1.94228651156368,0.718639647993729,1.1598144313382,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.655678681511872,0,1.71603825227734,0,0,0,0,1.35941691750254,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0.743990036333503,0.462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| |||
|short_description=p@chr19:36245605..36245616,+ | |||
}} |
Revision as of 22:51, 20 January 2014
Short description: | p@chr19:36245605..36245616, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36245605..36245616, + |
Coexpression cluster: | C339_Mesenchymal_heart_leiomyoma_Adipocyte_Smooth_skeletal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.26e-22 | 15 |
adipocyte of omentum tissue | 3.55e-10 | 3 |
omentum preadipocyte | 2.04e-09 | 3 |
hepatic stem cell | 2.32e-07 | 2 |
hepatic mesenchymal stem cell | 2.32e-07 | 2 |
outer root sheath cell | 2.78e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.10e-18 | 6 |
peritoneum | 7.10e-18 | 6 |
abdominal cavity | 7.10e-18 | 6 |
visceral peritoneum | 7.10e-18 | 6 |
adipose tissue | 1.73e-12 | 14 |
cavity lining | 1.20e-11 | 12 |
serous membrane | 1.20e-11 | 12 |
trunk mesenchyme | 3.65e-08 | 122 |
trunk | 2.63e-07 | 199 |
hair root sheath | 2.78e-07 | 2 |
hair outer root sheath | 2.78e-07 | 2 |
bulb of hair follicle | 2.78e-07 | 2 |
epithelial vesicle | 2.82e-07 | 78 |
perirenal fat | 5.40e-07 | 2 |
muscle structure | 8.65e-07 | 2 |
muscle organ | 8.65e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.32e-10 | 3 |
leiomyoma | 2.32e-10 | 3 |
benign neoplasm | 7.53e-08 | 4 |
heart disease | 9.17e-07 | 2 |