FFCP PHASE1:Hg19::chr19:35504186..35504202,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57655 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29305 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=26bp_to_uc002nxm.1_5end | |||
|description=CAGE_peak_5_at_GRAMD1A_5end | |||
|id=chr19:35504186..35504202,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.27e-17!140;CL:0002087!1.44e-14!119;CL:0002031!3.16e-13!124;CL:0000791!3.23e-13!18;CL:0000789!3.23e-13!18;CL:0002420!3.23e-13!18;CL:0002419!3.23e-13!18;CL:0000790!3.23e-13!18;CL:0000084!3.30e-12!25;CL:0000827!3.30e-12!25;CL:0002057!5.78e-12!42;CL:0000988!3.40e-11!182;CL:0000037!6.28e-11!172;CL:0000566!6.28e-11!172;CL:0000625!1.17e-10!11;CL:0000860!1.37e-10!45;CL:0002032!1.08e-09!165;CL:0000837!1.08e-09!165;CL:0002009!5.57e-09!65;CL:0000557!3.81e-08!71;CL:0002194!7.87e-08!63;CL:0000576!7.87e-08!63;CL:0000040!7.87e-08!63;CL:0000559!7.87e-08!63;CL:0000766!1.79e-07!76;CL:0000839!7.29e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.77e-20;18!CL:0000789;2.77e-20;18!CL:0002419;2.77e-20;18!CL:0000084;1.16e-17;25!CL:0000625;3.02e-15;11!CL:0000473;1.33e-12;39!CL:0000234;1.33e-12;39!CL:0000860;4.61e-12;33!CL:0002057;4.61e-12;33!CL:0000624;5.82e-08;6!CL:0002087;6.78e-08;104!CL:0000226;3.52e-07;3!CL:0000623;3.52e-07;3!CL:0000842;3.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.20e-24,115;CL:0000738,1.62e-23,136;CL:0002031,1.50e-21,120;CL:0000791,1.50e-20,18;CL:0000789,1.50e-20,18;CL:0002420,1.50e-20,18;CL:0002419,1.50e-20,18;CL:0000790,1.50e-20,18;CL:0000084,7.11e-18,25;CL:0000827,7.11e-18,25;CL:0000037,7.71e-18,168;CL:0000988,1.30e-16,177;CL:0002032,5.83e-16,161;CL:0000837,5.83e-16,161;CL:0000625,1.65e-15,11;CL:0000473,1.25e-14,48;CL:0000234,1.25e-14,48;CL:0002009,1.54e-12,61;CL:0000860,3.56e-12,42;CL:0002057,3.56e-12,42;CL:0000557,3.63e-11,67;CL:0002194,3.76e-11,59;CL:0000576,3.76e-11,59;CL:0000040,3.76e-11,59;CL:0000559,3.76e-11,59;CL:0000838,4.61e-11,52;CL:0000542,8.28e-11,53;CL:0000051,8.28e-11,53;CL:0000766,3.86e-10,72;CL:0000839,1.06e-09,66;CL:0000624,5.50e-08,6;CL:0000623,3.21e-07,3;CL:0000825,3.21e-07,3;CL:0000226,5.31e-07,3;CL:0000842,5.31e-07,3;CL:0000763,7.49e-07,108;CL:0000049,7.49e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;2.77e-20;18!CL:0002057;5.07e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.35e-10!102;UBERON:0003061!2.35e-10!102;UBERON:0002193!1.99e-09!112;UBERON:0002371!9.83e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.31e-10,98;UBERON:0003061,2.31e-10,98;UBERON:0002371,1.63e-09,76;UBERON:0002193,4.48e-09,108;UBERON:0001474,1.30e-08,82;UBERON:0004765,1.33e-07,90;UBERON:0002405,2.86e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,1.18009283054671,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0.553995408531877,1.40381113229099,0.651032612147555,0,0,0,0.290796477559129,0,0,1.85943229524548,0.822335776043652,0.309706370895104,0,0.256160706529101,0,2.41321976515633,1.29096936716765,0,0.752969358170419,0.272906150057846,0.224723484445085,1.53041946185451,0.641858054152187,0.639337125799041,0,0,0,11.6083695451434,12.4824749432051,8.09668923694247,0.502497330513487,0,0,6.05399502633369,3.31449872388808,2.21523671208619,0,0.212604299965044,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80254281490768,0,1.37696839079683,2.75107533924415,3.28962398399215,0.668745981562712,0.651844533267181,0.946895611469467,0,0.557052284425868,0.294605907474837,0.221533894583621,1.89562704635511,1.28091319725675,1.30059347559878,0.164437904603676,0,0,0.593146252648242,1.60524496853828,3.1360657141493,0,0,1.03088233644789,0.253019692019503,1.59282707162048,0.651083453856419,0.950452044448374,0.903450714466637,1.53583933385302,0,0.710331756132051,1.64225599384209,1.81446068902259,2.13952156626806,5.06885413589796,0,2.01210257911091,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0,0.858486162094873,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,1.20575750823834,0,0.599837947092342,1.2162378064119,2.00902836572851,0,0.239624855491583,0,0,0,0,0,0,0.985153801009636,1.94064817373566,1.15508732651774,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,1.24060815673732,0.647142602455851,1.17400313583789,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,1.6068392984416,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0.255897791311334,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.886860307073351,0.229723400206959,0.507447609232169,0,0,0,0.411362273086194,1.29694662238543,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.17546385565892,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0,0,0,0,0.164831716762333,0,0,0,0,0,0.321506296930038,0.137539436597234,0,1.799791132412,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0.300515217994437,0.761610424337591,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0.138258436151731,0.584580926518165,0.265729680626726,0.163565394255844,0,0,0,0.59996218756479,0,0,0.567515953566836,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0.169927114687817,0.751871343838829,0.322289439867886,0,0,0.352894871715692,0,0,0.917458566809082,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0,0,0,0,0,0.103432995861895,0.21323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| |||
|short_description=p5@GRAMD1A | |||
}} |
Revision as of 22:41, 20 January 2014
Short description: | p5@GRAMD1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GRAMD1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_uc002nxm.1_5end |
EntrezGene: | GRAMD1A |
HGNC: | 29305 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.31e-10 | 98 |
blood island | 2.31e-10 | 98 |
bone marrow | 1.63e-09 | 76 |
hemolymphoid system | 4.48e-09 | 108 |
bone element | 1.30e-08 | 82 |
skeletal element | 1.33e-07 | 90 |
immune system | 2.86e-07 | 93 |