FFCP PHASE1:Hg19::chr19:13885252..13885293,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28974 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24991 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UNZ5 | |||
|association_with_transcript=0bp_to_ENST00000221576,NM_014047,uc002mxg.2_5end | |||
|coexpression_cluster_id=C685 | |||
|description=CAGE_peak_1_at_C19orf53_5end | |||
|id=chr19:13885252..13885293,+ | |||
|ontology_enrichment_celltype=CL:0000222!6.86e-15!119;CL:0000220!7.38e-14!246;CL:0002321!7.90e-14!248;CL:0000183!3.68e-13!59;CL:0000548!1.16e-12!679;CL:0000004!1.16e-12!679;CL:0000255!1.16e-12!679;CL:0000012!4.73e-12!682;CL:0002371!1.46e-11!591;CL:0000144!2.37e-11!625;CL:0000055!2.83e-11!180;CL:0000187!1.18e-10!54;CL:0000680!1.34e-10!57;CL:0000056!1.34e-10!57;CL:0000355!1.34e-10!57;CL:0000393!3.67e-09!60;CL:0000211!3.67e-09!60;CL:0000003!1.47e-08!722;CL:0000192!1.94e-08!42;CL:0000514!1.94e-08!42;CL:0000066!2.62e-07!254;CL:1000449!5.08e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000187;5.58e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.31e-15,121;CL:0002321,1.98e-14,250;CL:0000187,5.78e-11,55;CL:0000680,6.60e-11,58;CL:0000056,6.60e-11,58;CL:0000355,6.60e-11,58;CL:0000393,1.88e-09,61;CL:0000211,1.88e-09,61;CL:0000192,9.64e-09,43;CL:0000514,9.64e-09,43;CL:0000066,3.98e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.07e-15!143;UBERON:0000914!3.15e-14!83;UBERON:0002329!3.15e-14!83;UBERON:0003077!3.15e-14!83;UBERON:0003059!3.15e-14!83;UBERON:0007282!3.15e-14!83;UBERON:0009618!3.15e-14!83;UBERON:0007285!3.15e-14!83;UBERON:0004290!1.37e-13!70;UBERON:0000486!4.75e-13!82;UBERON:0003104!4.00e-12!238;UBERON:0009142!4.00e-12!238;UBERON:0001134!1.97e-11!61;UBERON:0002036!1.97e-11!61;UBERON:0003082!1.97e-11!61;UBERON:0002100!2.16e-11!216;UBERON:0000490!5.54e-11!138;UBERON:0002385!2.71e-10!63;UBERON:0001015!2.71e-10!63;UBERON:0000383!2.71e-10!63;UBERON:0003914!5.58e-10!118;UBERON:0004872!2.84e-09!84;UBERON:0002049!5.03e-09!79;UBERON:0007798!5.03e-09!79;UBERON:0001981!3.81e-08!60;UBERON:0007500!3.81e-08!60;UBERON:0004537!3.81e-08!60;UBERON:0006965!3.81e-08!60;UBERON:0000055!4.72e-08!69;UBERON:0000353!1.22e-07!17;UBERON:0001737!4.63e-07!9;UBERON:0004211!5.08e-07!16;UBERON:0001285!5.08e-07!16;UBERON:0007684!5.08e-07!16;UBERON:0003220!5.08e-07!16;UBERON:0004208!5.08e-07!16;UBERON:0003103!5.35e-07!69;UBERON:0001637!7.91e-07!42;UBERON:0003509!7.91e-07!42;UBERON:0004572!7.91e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;1.95e-07;15!UBERON:0001737;4.62e-07;9!UBERON:0001557;4.62e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.23e-17,78;UBERON:0002329,6.58e-14,71;UBERON:0003059,6.58e-14,71;UBERON:0007282,6.58e-14,71;UBERON:0004290,6.58e-14,71;UBERON:0009618,6.58e-14,71;UBERON:0003104,1.20e-13,160;UBERON:0009142,1.20e-13,160;UBERON:0007524,1.23e-13,73;UBERON:0003077,1.92e-13,72;UBERON:0007285,1.92e-13,72;UBERON:0000486,2.34e-13,83;UBERON:0000490,3.57e-13,148;UBERON:0005256,3.11e-12,122;UBERON:0001134,9.65e-12,62;UBERON:0002036,9.65e-12,62;UBERON:0003082,9.65e-12,62;UBERON:0002100,1.26e-10,199;UBERON:0002385,1.36e-10,64;UBERON:0001015,1.36e-10,64;UBERON:0000383,1.36e-10,64;UBERON:0003914,1.00e-09,117;UBERON:0004872,3.10e-09,83;UBERON:0002049,5.47e-09,78;UBERON:0007798,5.47e-09,78;UBERON:0007500,4.07e-08,59;UBERON:0001981,4.07e-08,59;UBERON:0004537,4.07e-08,59;UBERON:0006965,4.07e-08,59;UBERON:0000055,5.12e-08,68;UBERON:0000353,1.88e-07,15;UBERON:0001737,4.63e-07,9;UBERON:0001637,7.91e-07,42;UBERON:0003509,7.91e-07,42;UBERON:0004572,7.91e-07,42;UBERON:0003103,9.52e-07,68 | |||
|phase1_expression=150.793054794562,167.64071020664,148.424987513058,183.134135986229,184.59493199847,190.16979825388,392.614811160881,258.373428231574,282.602849712225,257.037697580578,694.312162132565,206.863979407273,191.231059215629,179.956277203908,207.123359829947,209.093120546502,212.751168392464,229.317368381635,153.69883161901,205.858409104389,250.716849539187,299.035804290096,116.49804676234,120.449494064138,127.927949747104,122.185035790974,117.650144681772,116.334534781618,105.814990472355,84.4424675813868,99.2371350456047,277.665209792636,324.097568605397,231.096256354242,124.489791332545,75.6340316833083,107.164160357219,73.1273939262078,72.7976344316614,82.2471200013078,111.733821645722,66.3982015338908,99.9393202420644,79.0966418960832,77.8424443998947,78.8398198860403,73.4475756621963,69.8985409637104,71.2324653058738,65.018480664806,69.9318728824445,83.9511916104478,85.4969288226814,83.2675241823136,71.7760378950011,70.5908773284768,72.3201297653291,81.5746248535657,77.7453086622093,75.0973923358059,65.8517239573012,76.5255016433181,60.8364155745977,61.376364076708,68.7795895549744,67.5188417382456,62.9050471485531,70.3496262718881,69.3572281498868,83.4005163667648,73.858739321271,78.4431364653513,71.204037174199,133.724596235459,124.798724079481,130.826994797227,101.432753925285,106.625593917469,99.9713149255838,116.855224933912,112.586839294685,119.462356562071,156.636657570577,120.696633088931,143.210989872032,102.841983638528,117.716420188588,136.216328269213,153.362410486088,161.235084516477,80.8282416135417,93.3707131099793,94.0392141188063,108.380489434801,96.9679813958057,96.1351909429031,146.155359194578,131.265594758221,134.25777884668,143.278826549811,166.546278249765,181.330509596403,200.671530260149,135.02947374483,154.07888960934,167.03655651605,142.984440067928,130.396963480737,126.677804523321,145.034231860442,158.348560191291,137.07685955268,151.10400786214,176.309405711121,196.526784753356,128.719413304435,157.886843363992,190.71323224286,154.342012131897,156.734183847456,173.839282179664,162.527299600672,170.300459676961,178.285349338105,138.673106473104,145.381232755026,151.908679430394,113.504596435524,105.103996942918,137.293534880893,385.214848776059,255.537027547085,155.608737763576,125.419385877444,156.417428118398,142.094435100568,170.191192668935,189.787599418028,153.051868988626,148.115237504993,159.507970818717,104.455812709426,319.122672544267,333.705998505986,86.6541541058004,85.4977010139402,129.368095584856,129.738899622106,161.302564839996,159.355268070383,188.625524591003,249.468032580776,218.351375511177,240.821183259628,256.314155524252,186.530032435366,220.907679629409,105.950871259425,103.883748704519,98.7425807655777,197.789194700591,216.677550129776,178.409364067712,175.007626244634,244.662868260291,130.02040438162,176.031028138917,165.989322232417,211.576959702919,175.614147020104,209.765996800316,50.076558625704,73.6782501881818,283.89722794479,135.176370861127,110.168545148184,41.5764827753507,51.6305917347865,141.867352879343,190.069706448242,156.921023722666,243.460870287737,126.040469336905,120.566051502371,160.029203148076,180.569411180403,152.6866199872,212.529538673254,205.401330554351,291.511100809214,205.641384439278,168.988243548378,178.869603526785,189.187236627929,141.274686508386,143.10197966821,134.736818653198,165.132397162205,171.850515848597,263.946794962028,381.586233304423,135.342235619069,141.258808935448,129.943070162082,180.419802182024,138.838971496956,163.459008090377,161.64086100303,45.5649674649709,174.689944053588,198.792123287669,63.3192212738089,184.773184924521,49.7246242288064,209.381463373039,38.64978008325,187.176486914663,48.7197184291141,149.949284888306,217.73723853494,44.3761990645768,175.107146719639,187.364454503089,158.667160447067,122.463008145285,133.937746046665,131.731602619963,152.011644264744,152.562646987678,140.253407435796,156.691248393765,151.465604016469,192.432924765674,151.804861413521,255.549604502089,192.712690133271,283.698636296147,335.636391713037,335.989287325657,327.292978581769,346.984838216111,324.640371697685,325.535289420425,364.853519881405,345.349778620609,399.367548910353,291.571404576736,443.164005218889,243.240240696857,417.504740334939,125.487484473613,134.647328684835,124.065880403095,147.448675204493,83.6321382093172,190.611837241662,119.408310524585,195.579050668258,178.941570892703,149.993281156818,158.017028075507,422.213522823509,206.393819096141,134.479269771089,158.619145912595,138.736156298392,223.159017061926,156.38891313684,205.453143469412,227.498832955141,80.2667439844915,101.791855335568,133.768046059855,204.339758091174,200.402678941239,205.290340806976,96.6336459963733,130.785272331283,221.595188557492,72.9141592085996,106.71470202403,102.834745308223,113.422403339149,91.7782491009782,110.867323434127,194.432108609163,205.130532617582,183.047517244295,154.138411562282,194.321958425015,155.203752918404,216.637254955237,250.677039579136,156.870593371012,119.4470653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| |||
|short_description=p1@C19orf53 | |||
}} |
Revision as of 21:41, 20 January 2014
Short description: | p1@C19orf53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C19orf53_5end |
Coexpression cluster: | C685_Alveolar_Mesenchymal_Renal_Smooth_Hepatic_Fibroblast_Keratocytes |
Association with transcript: | 0bp_to_ENST00000221576, NM_014047, uc002mxg.2_5end |
EntrezGene: | C19orf53 |
HGNC: | 24991 |
UniProt: | Q9UNZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.31e-15 | 121 |
embryonic cell | 1.98e-14 | 250 |
muscle cell | 5.78e-11 | 55 |
muscle precursor cell | 6.60e-11 | 58 |
myoblast | 6.60e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.60e-11 | 58 |
electrically responsive cell | 1.88e-09 | 61 |
electrically active cell | 1.88e-09 | 61 |
smooth muscle cell | 9.64e-09 | 43 |
smooth muscle myoblast | 9.64e-09 | 43 |
epithelial cell | 3.98e-07 | 253 |