FFCP PHASE1:Hg19::chr19:11308190..11308244,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29300 | |||
|TSSclassifier=strong | |||
|UniProt=Q63ZY3 | |||
|association_with_transcript=0bp_to_ENST00000432929,NM_001136191,uc002mqo.3,uc010dxv.2_5end | |||
|description=CAGE_peak_1_at_KANK2_5end | |||
|id=chr19:11308190..11308244,- | |||
|ontology_enrichment_celltype=CL:0000055!4.88e-27!180;CL:0000057!6.84e-17!75;CL:0000183!1.33e-09!59;CL:0000680!3.76e-09!57;CL:0000056!3.76e-09!57;CL:0000355!3.76e-09!57;CL:0000187!2.43e-08!54;CL:0002620!3.18e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.25e-07;23!CL:0000057;4.05e-07;73!CL:0002320;5.24e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.98e-17,76;CL:0000680,1.25e-09,58;CL:0000056,1.25e-09,58;CL:0000355,1.25e-09,58;CL:0000187,8.26e-09,55;CL:0002620,3.12e-07,23;CL:0000192,5.96e-07,43;CL:0000514,5.96e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.80e-13!143;UBERON:0002100!6.42e-13!216;UBERON:0000475!5.59e-12!365;UBERON:0000914!6.72e-12!83;UBERON:0002329!6.72e-12!83;UBERON:0003077!6.72e-12!83;UBERON:0003059!6.72e-12!83;UBERON:0007282!6.72e-12!83;UBERON:0009618!6.72e-12!83;UBERON:0007285!6.72e-12!83;UBERON:0004290!4.83e-11!70;UBERON:0000481!5.92e-11!347;UBERON:0002385!1.09e-10!63;UBERON:0001015!1.09e-10!63;UBERON:0000383!1.09e-10!63;UBERON:0000468!2.53e-10!659;UBERON:0001134!4.01e-10!61;UBERON:0002036!4.01e-10!61;UBERON:0003082!4.01e-10!61;UBERON:0003104!1.11e-09!238;UBERON:0009142!1.11e-09!238;UBERON:0000486!5.31e-09!82;UBERON:0003103!6.89e-08!69;UBERON:0007100!8.01e-08!27;UBERON:0003914!6.93e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.08e-07;25!UBERON:0002384;6.02e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.48e-15,160;UBERON:0009142,1.48e-15,160;UBERON:0005256,1.14e-12,122;UBERON:0007524,1.42e-11,73;UBERON:0007503,1.52e-11,78;UBERON:0002329,1.57e-11,71;UBERON:0003059,1.57e-11,71;UBERON:0007282,1.57e-11,71;UBERON:0004290,1.57e-11,71;UBERON:0009618,1.57e-11,71;UBERON:0003077,2.29e-11,72;UBERON:0007285,2.29e-11,72;UBERON:0002100,3.24e-11,199;UBERON:0002385,3.46e-11,64;UBERON:0001015,3.46e-11,64;UBERON:0000383,3.46e-11,64;UBERON:0001134,1.30e-10,62;UBERON:0002036,1.30e-10,62;UBERON:0003082,1.30e-10,62;UBERON:0000486,1.99e-09,83;UBERON:0007100,7.85e-08,27;UBERON:0003103,1.72e-07,68 | |||
|phase1_expression=49.9615542994031,59.5199456416933,44.8235005025188,59.0432460283469,46.4839538204379,39.2552335845166,27.8629865985142,68.2257463300977,73.3931615241546,30.2252741896856,23.7252397110625,28.6158197490526,48.5331239940355,67.9477277750656,103.727378602838,41.6841590800101,40.9832279056304,36.5155045193687,38.0587583056595,58.605623644551,79.3562688940144,40.1222043491952,12.3081474466354,22.7211545620988,22.5976751270645,4.50839093912912,4.02292888304734,4.64393609750708,0,0,1.70297735647684,3.67768489791571,6.024118375565,1.47901604066715,41.2900179093008,15.0699386436667,5.87200878669694,0.553995408531877,1.40381113229099,0.434021741431704,13.8827594028753,10.3645973126073,17.2575630314905,0.290796477559129,7.17964293008738,1.4555043671269,0.232429036905685,2.05583944010913,1.23882548358041,0.28769239232215,4.35473201099471,0,0.689491361473237,9.68227025375739,0,0.752969358170419,3.82068610080984,0.449446968890169,0,2.88836124368484,1.27867425159808,0.329851300186716,3.39088217956774,0.426224750532694,0,4.53908179752912,0,0.502497330513487,5.21482918420201,0.65156653411535,15.1349875658342,2.20966581592539,0.316462387440884,0.211255286311942,0.637812899895131,0.628975936525128,0.112328631146495,0,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,1.17447437874188,0.382273228125229,5.28685314316103,1.68152568894461,8.95505888235262,0.196709770113833,0,0,0.167186495390678,0,0,0,0.557052284425868,0,0,0.270803863765016,0.640456598628376,0.650296737799391,0.822189523018381,1.10540007114339,2.02862160014537,0,0,0,0.566546713487831,0,0,0,0,0,0,0,0.127986611154418,0,0.473554504088034,0.821127996921047,0,0,0,575.38420450095,43.5955558807363,20.2022847712778,22.4092274478431,74.6993486847475,46.7854256243461,81.9144525462632,54.9897403441979,21.1757990447512,21.2860221564061,24.6815747797684,64.2452365316281,5.10013403609559,5.93255108455087,0.649094787309367,0.174129737299267,0.132957960518865,0,0,0,16.0997549967031,30.1082108287144,19.0927275884177,33.3531685735166,13.8434813949269,9.07889538402223,17.5555771890921,13.1792547176358,12.0960529313481,24.0998841190563,12.8905381474927,14.4451700086517,19.0368404887572,7.72092468726324,17.012980905517,8.75137337183982,13.9208211028225,13.625989138482,7.66583187329416,13.2897192339538,12.8241220751285,0,0,8.72188104285069,53.6729707830944,35.7098042894115,37.3393889893277,59.6620171157533,56.7469411517371,50.4609840128076,23.4847790605351,18.2533985828698,95.852998903128,33.1388253291433,43.3174043250666,138.643403722757,103.13549048192,36.5541433660723,41.829450295263,39.362555686567,45.8807449294029,28.7714521677224,27.8421464313186,32.1632347348149,74.1079641655263,60.0659811654545,98.3661436793287,76.0321828660514,78.6308835105811,101.027911175121,77.6107593161537,51.1741786420361,69.691015568684,51.533925480058,80.3329046211933,55.7807788354216,87.5887883425459,15.4267769097629,80.545946424299,56.8062654257389,50.4397924759757,69.3210431954969,68.7360370020387,97.6457646772935,58.2545760317876,49.451465346691,63.9186753857463,97.9443044067164,61.7654819889829,119.77972810274,90.5274460917367,58.0332085791208,48.8334505854204,6.1843473012255,4.36393792945335,5.16248271700207,15.2467132661994,18.1565782600435,13.2461094871251,15.0308529772287,11.3544382894033,15.6940264402607,40.6768784057521,47.5998294262735,74.5928575303395,72.4413967729887,66.4129123136019,11.7123732039445,12.9810211360138,13.496617673475,13.1249827551549,14.1621638660064,15.4225902422213,10.9213359609733,10.5959591167687,12.3119090222845,12.548642728619,56.0967095213783,85.1958203455998,136.718101588554,38.0265104465493,39.313088667105,54.9434613213706,5.73902029239046,6.64137568132813,22.3038153388083,1.53650399572076,2.24803506515239,2.01057944823262,5.27754137403619,77.216568358547,75.9152393254092,17.3197610430328,17.6214215562117,29.7043996416629,12.5598809552134,12.5006088395685,14.0788072653603,18.1747011530633,26.613071024941,2.70838706696137,0.468008530278475,6.39113997841531,0.93733833986777,4.19955320497149,2.1266264586358,2.95543124919399,2.03443756959773,8.81780162079986,1.47798971368783,18.6662680108039,72.5648404392702,60.0980205748729,59.2077012769722,37.5907534209641,42.4007152369688,154.727030317262,54.7431827272657,44.7299593259457,30.0343057843917,64.5967737745107,106.973054465474,79.7806925964903,36.0824366239074,32.4472006552022,128.756320506678,27.894990834348,106.641184750533,88.4063213746612,50.1554379811177,26.9513350844229,73.2660992294273,57.6201314442335,81.3932408087165,46.1014588597231,26.7103671120863,49.0440889264713,17.4229412045354,22.607953279469,8.71533458600294,18.3950303774985,0,0.502257091432126,0,32.1097306358721,70.0657808588095,158.326964595197,41.6970163202628,120.203648691974,61.4179103912842,3.36255431980582,0.197030760201927,0,0.128343036279748,7.87693335089637,5.20559415430487,3.86644406388848,2.34522771468088,3.82763250991898,0,0,0,89.8101719384104,84.02864753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| |||
|short_description=p1@KANK2 | |||
}} |
Revision as of 21:22, 20 January 2014
Short description: | p1@KANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KANK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432929, NM_001136191, uc002mqo.3, uc010dxv.2_5end |
EntrezGene: | KANK2 |
HGNC: | 29300 |
UniProt: | Q63ZY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.98e-17 | 76 |
muscle precursor cell | 1.25e-09 | 58 |
myoblast | 1.25e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.25e-09 | 58 |
muscle cell | 8.26e-09 | 55 |
skin fibroblast | 3.12e-07 | 23 |
smooth muscle cell | 5.96e-07 | 43 |
smooth muscle myoblast | 5.96e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.48e-15 | 160 |
entire embryonic mesenchyme | 1.48e-15 | 160 |
trunk mesenchyme | 1.14e-12 | 122 |
dense mesenchyme tissue | 1.42e-11 | 73 |
epithelial vesicle | 1.52e-11 | 78 |
somite | 1.57e-11 | 71 |
presomitic mesoderm | 1.57e-11 | 71 |
presumptive segmental plate | 1.57e-11 | 71 |
dermomyotome | 1.57e-11 | 71 |
trunk paraxial mesoderm | 1.57e-11 | 71 |
paraxial mesoderm | 2.29e-11 | 72 |
presumptive paraxial mesoderm | 2.29e-11 | 72 |
trunk | 3.24e-11 | 199 |
muscle tissue | 3.46e-11 | 64 |
musculature | 3.46e-11 | 64 |
musculature of body | 3.46e-11 | 64 |
skeletal muscle tissue | 1.30e-10 | 62 |
striated muscle tissue | 1.30e-10 | 62 |
myotome | 1.30e-10 | 62 |
multilaminar epithelium | 1.99e-09 | 83 |
primary circulatory organ | 7.85e-08 | 27 |
compound organ | 1.72e-07 | 68 |