FFCP PHASE1:Hg19::chr19:5130791..5130800,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23030 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29136 | |||
|TSSclassifier=not | |||
|UniProt=O94953 | |||
|association_with_transcript=-428bp_to_AL133622_5end | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_3_at_KDM4B_5end | |||
|id=chr19:5130791..5130800,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.56e-39!52;CL:0000542!1.12e-38!53;CL:0000051!1.12e-38!53;CL:0000791!6.80e-21!18;CL:0000789!6.80e-21!18;CL:0002420!6.80e-21!18;CL:0002419!6.80e-21!18;CL:0000790!6.80e-21!18;CL:0000738!1.85e-20!140;CL:0002087!6.76e-20!119;CL:0000945!7.26e-19!24;CL:0000826!7.26e-19!24;CL:0000236!1.03e-18!14;CL:0000084!1.81e-17!25;CL:0000827!1.81e-17!25;CL:0000624!2.08e-17!6;CL:0002031!9.93e-16!124;CL:0000037!2.54e-15!172;CL:0000566!2.54e-15!172;CL:0000988!4.34e-14!182;CL:0002032!1.66e-12!165;CL:0000837!1.66e-12!165;CL:0000815!7.79e-10!2;CL:0000792!7.79e-10!2;CL:0002677!7.79e-10!2;CL:0000625!6.06e-09!11;CL:0000898!8.26e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.72e-39;13!CL:0000815;2.70e-22;2!CL:0000792;2.70e-22;2!CL:0002677;2.70e-22;2!CL:0000945;6.58e-21;24!CL:0000898;3.34e-15;3!CL:0000542;3.59e-12;53!CL:0000624;4.74e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.18e-36,14;CL:0000815,3.17e-22,2;CL:0000792,3.17e-22,2;CL:0002677,3.17e-22,2;CL:0000945,5.33e-21,24;CL:0000826,5.33e-21,24;CL:0000838,2.28e-15,52;CL:0000898,3.72e-15,3;CL:0000542,4.67e-15,53;CL:0000051,4.67e-15,53;CL:0000624,4.99e-08,6;CL:0002087,1.02e-07,115;CL:0000738,1.04e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;3.59e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,2.13365111283254,1.20118796110804,1.72425731986345,1.98313461835459,0,9.67662047486062,6.45960908308033,9.17455747500549,2.64342657158052,1.12101712596307,0,0.393419540227666,0.786021525498329,0.411202997999018,0.501559486172034,4.88883399950386,6.15482147455153,3.89653456815823,0.111410456885174,2.06224135232386,1.55073726208535,2.16643091012012,0.25618263945135,0,0,0,0,0.593146252648242,1.33770414044857,1.04535523804977,0,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0.604820229674197,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31037357147929,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p3@KDM4B | |||
}} |
Revision as of 20:44, 20 January 2014
Short description: | p3@KDM4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KDM4B_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -428bp_to_AL133622_5end |
EntrezGene: | KDM4B |
HGNC: | 29136 |
UniProt: | O94953 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.18e-36 | 14 |
regulatory T cell | 3.17e-22 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.17e-22 | 2 |
naive regulatory T cell | 3.17e-22 | 2 |
lymphocyte of B lineage | 5.33e-21 | 24 |
pro-B cell | 5.33e-21 | 24 |
lymphoid lineage restricted progenitor cell | 2.28e-15 | 52 |
naive T cell | 3.72e-15 | 3 |
lymphocyte | 4.67e-15 | 53 |
common lymphoid progenitor | 4.67e-15 | 53 |
CD4-positive, alpha-beta T cell | 4.99e-08 | 6 |
nongranular leukocyte | 1.02e-07 | 115 |
leukocyte | 1.04e-07 | 136 |