FFCP PHASE1:Hg19::chr19:1133589..1133603,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C451 | |||
|description=CAGE_peak_at_chr19:1133589..1133603,- | |||
|id=chr19:1133589..1133603,- | |||
|ontology_enrichment_celltype=CL:0000738!3.95e-32!140;CL:0000988!2.96e-30!182;CL:0000037!4.85e-29!172;CL:0000566!4.85e-29!172;CL:0002087!9.40e-29!119;CL:0002032!6.04e-27!165;CL:0000837!6.04e-27!165;CL:0000838!3.01e-23!52;CL:0002031!7.76e-23!124;CL:0000542!1.19e-22!53;CL:0000051!1.19e-22!53;CL:0000084!3.78e-17!25;CL:0000827!3.78e-17!25;CL:0000791!2.07e-14!18;CL:0000789!2.07e-14!18;CL:0002420!2.07e-14!18;CL:0002419!2.07e-14!18;CL:0000790!2.07e-14!18;CL:0000080!2.27e-12!6;CL:0002057!3.40e-12!42;CL:0000860!4.73e-11!45;CL:0000766!7.97e-10!76;CL:0000094!8.91e-10!8;CL:0000081!2.56e-09!11;CL:0000624!9.21e-09!6;CL:0000763!1.16e-08!112;CL:0000049!1.16e-08!112;CL:0000775!4.88e-08!3;CL:0000623!7.27e-08!3;CL:0000825!7.27e-08!3;CL:0000842!3.34e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000775;7.41e-21;3!CL:0000623;2.00e-20;3!CL:0000081;6.63e-15;11!CL:0000860;1.23e-13;33!CL:0002057;1.23e-13;33!CL:0000094;1.92e-13;8!CL:0000473;6.04e-10;39!CL:0000234;6.04e-10;39!CL:0000576;2.02e-09;48!CL:0000226;2.85e-09;3!CL:0000842;2.85e-09;3!CL:0002127;1.44e-07;1!CL:0000911;1.44e-07;1!CL:0000895;1.44e-07;1!CL:0000814;1.44e-07;1!CL:0002087;9.05e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,5.68e-21,3;CL:0000738,1.02e-20,136;CL:0000623,1.88e-20,3;CL:0000825,1.88e-20,3;CL:0000988,1.62e-16,177;CL:0002087,2.13e-16,115;CL:0000037,6.14e-16,168;CL:0000766,5.06e-15,72;CL:0000081,6.00e-15,11;CL:0000860,4.24e-14,42;CL:0002057,4.24e-14,42;CL:0002032,1.21e-13,161;CL:0000837,1.21e-13,161;CL:0000094,1.69e-13,8;CL:0000893,2.92e-13,2;CL:0002489,2.92e-13,2;CL:0000809,2.92e-13,2;CL:0000808,2.92e-13,2;CL:0000894,2.92e-13,2;CL:0000806,2.92e-13,2;CL:0000807,2.92e-13,2;CL:0000805,2.92e-13,2;CL:0002425,2.92e-13,2;CL:0002031,3.63e-12,120;CL:0000473,4.06e-12,48;CL:0000234,4.06e-12,48;CL:0002194,2.40e-09,59;CL:0000576,2.40e-09,59;CL:0000040,2.40e-09,59;CL:0000559,2.40e-09,59;CL:0000226,2.85e-09,3;CL:0000842,2.85e-09,3;CL:0000763,3.79e-09,108;CL:0000049,3.79e-09,108;CL:0002009,5.46e-09,61;CL:0000839,3.44e-08,66;CL:0000557,4.80e-08,67;CL:0000810,1.64e-07,1;CL:0000895,1.64e-07,1;CL:0002436,1.64e-07,1;CL:0002427,1.64e-07,1;CL:0002428,1.64e-07,1;CL:0002429,1.64e-07,1;CL:0002433,1.64e-07,1;CL:0002431,1.64e-07,1;CL:0002432,1.64e-07,1;CL:0002127,1.99e-07,1;CL:0000914,1.99e-07,1;CL:0000911,1.99e-07,1;CL:0000814,1.99e-07,1;CL:0002042,1.99e-07,1;CL:0002039,1.99e-07,1;CL:0002040,1.99e-07,1;CL:0002041,1.99e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002425;1.87e-13;2!CL:0002057;8.74e-11;42!CL:0002427;1.44e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.35e-18!15;UBERON:0000179!2.35e-18!15;UBERON:0000463!2.35e-18!15;UBERON:0002390!1.59e-15!102;UBERON:0003061!1.59e-15!102;UBERON:0002193!3.22e-14!112;UBERON:0004177!8.11e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.97e-20;15!UBERON:0000179;4.97e-20;15!UBERON:0000463;4.97e-20;15!UBERON:0002390;1.13e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.13e-20,15;UBERON:0000179,5.13e-20,15;UBERON:0000463,5.13e-20,15;UBERON:0002390,8.63e-20,98;UBERON:0003061,8.63e-20,98;UBERON:0002193,1.27e-17,108;UBERON:0002405,8.77e-08,93;UBERON:0003081,1.21e-07,203;UBERON:0002370,4.57e-07,4;UBERON:0005058,4.57e-07,4;UBERON:0009113,4.57e-07,4;UBERON:0003295,4.57e-07,4;UBERON:0005562,4.57e-07,4;UBERON:0002371,6.61e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.410502947249729,0.550975469195755,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,1.66198622559563,0.601633342410425,0,0,0,0,0,0,0,0,0,0,4.31538588483226,4.09857130446561,3.54723344832878,0,0,0,0,0,0,0.306083892370903,0,0,2.63881040149373,3.19141852194611,2.13112375266347,0.290209238628584,0.56738522469114,0,6.53246529667532,5.21482918420201,4.12658804939722,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0.39783335439818,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0.764546456250458,0,2.24203425192614,0,0.196709770113833,0.786021525498329,0.822405995998037,0,0,0,0,0,0.883817722424512,0,0.270803863765016,0,0.260118695119756,0,0,0,0,0,0,0,1.14966148080576,0.68725489096526,0.253019692019503,0,0,0,0.150575119077773,0,0,0.473554504088034,0.821127996921047,2.62088766192152,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,2.1673383622212,3.66566877261179,3.46526197955321,0,0,0,0,0,5.24304916763028,2.99161459204025,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0,0,0.476463550915578,1.23408681925858,3.24236655596359,0.540031437238115,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,1.6480387422676,0,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26173241548684,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,1.38328142328561,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr19:1133589..1133603,- | |||
}} |
Revision as of 20:12, 20 January 2014
Short description: | p@chr19:1133589..1133603, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1133589..1133603, - |
Coexpression cluster: | C451_CD14_CD4_Eosinophils_Neutrophils_adult_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 5.13e-20 | 15 |
haemolymphatic fluid | 5.13e-20 | 15 |
organism substance | 5.13e-20 | 15 |
hematopoietic system | 8.63e-20 | 98 |
blood island | 8.63e-20 | 98 |
hemolymphoid system | 1.27e-17 | 108 |
immune system | 8.77e-08 | 93 |
lateral plate mesoderm | 1.21e-07 | 203 |
thymus | 4.57e-07 | 4 |
hemolymphoid system gland | 4.57e-07 | 4 |
thymic region | 4.57e-07 | 4 |
pharyngeal gland | 4.57e-07 | 4 |
thymus primordium | 4.57e-07 | 4 |
bone marrow | 6.61e-07 | 76 |