FFCP PHASE1:Hg19::chr18:53177899..53177918,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |||
|TSSclassifier=weak | |||
|UniProt=B3KUC0 | |||
|association_with_transcript=81bp_to_ENST00000543082,NM_001243231,uc002lfy.2_5end | |||
|description=CAGE_peak_33_at_TCF4_5end | |||
|id=chr18:53177899..53177918,- | |||
|ontology_enrichment_celltype=CL:0002139!2.15e-16!24;CL:0000071!1.82e-10!18;CL:0002546!1.82e-10!18;CL:0000115!5.16e-10!35;CL:0005020!5.51e-08!6;CL:0002138!5.51e-08!6;CL:0005022!5.51e-08!6;CL:0002543!2.37e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.92e-16;6!CL:0002139;3.00e-11;24!CL:0002543;6.95e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.14e-16,6;CL:0002138,1.14e-16,6;CL:0005022,1.14e-16,6;CL:0002139,2.37e-11,24;CL:0002543,6.66e-10,6;CL:0000115,5.02e-07,36 | |||
|ontology_enrichment_development_v019=CL:0005022;1.92e-16;6!UBERON:0004872;2.69e-13;7!UBERON:0006965;3.12e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.46e-44!115;UBERON:0004111!1.69e-18!241;UBERON:0001049!5.50e-17!57;UBERON:0005068!5.50e-17!57;UBERON:0006241!5.50e-17!57;UBERON:0007135!5.50e-17!57;UBERON:0000025!8.61e-17!194;UBERON:0000477!4.86e-15!286;UBERON:0003075!4.79e-13!86;UBERON:0007284!4.79e-13!86;UBERON:0002780!6.92e-13!41;UBERON:0001890!6.92e-13!41;UBERON:0006240!6.92e-13!41;UBERON:0002616!1.40e-12!59;UBERON:0002346!1.45e-12!90;UBERON:0003080!2.21e-12!42;UBERON:0002020!2.82e-12!34;UBERON:0003528!2.82e-12!34;UBERON:0000055!7.11e-12!69;UBERON:0001893!1.04e-11!34;UBERON:0002791!3.53e-11!33;UBERON:0001017!5.66e-11!82;UBERON:0005743!1.51e-10!86;UBERON:0001869!1.65e-10!32;UBERON:0004872!1.65e-10!84;UBERON:0001986!1.82e-10!18;UBERON:0004638!1.82e-10!18;UBERON:0004852!1.82e-10!18;UBERON:0000955!2.62e-10!69;UBERON:0006238!2.62e-10!69;UBERON:0000073!7.99e-10!94;UBERON:0001016!7.99e-10!94;UBERON:0002308!4.72e-09!9;UBERON:0000125!4.72e-09!9;UBERON:0002049!5.24e-09!79;UBERON:0007798!5.24e-09!79;UBERON:0001981!6.48e-09!60;UBERON:0007500!6.48e-09!60;UBERON:0004537!6.48e-09!60;UBERON:0006965!6.48e-09!60;UBERON:0001009!2.82e-08!113;UBERON:0004535!3.88e-08!110;UBERON:0000487!8.87e-08!22;UBERON:0002619!1.25e-07!22;UBERON:0000483!1.72e-07!309;UBERON:0000119!3.28e-07!312;UBERON:0009663!4.29e-07!7;UBERON:0002420!7.69e-07!9;UBERON:0007245!7.69e-07!9;UBERON:0010009!7.69e-07!9;UBERON:0010011!7.69e-07!9;UBERON:0000454!7.69e-07!9;UBERON:0003056!9.90e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;2.99e-12;8!UBERON:0004536;2.99e-12;8!UBERON:0006558;2.99e-12;8!UBERON:0001638;6.61e-10;9!UBERON:0003920;6.61e-10;9!UBERON:0004582;6.61e-10;9!UBERON:0002465;9.91e-10;10!UBERON:0005090;1.39e-08;2!UBERON:0001630;1.39e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.17e-13,114;UBERON:0001473,2.04e-12,8;UBERON:0004536,2.04e-12,8;UBERON:0006558,2.04e-12,8;UBERON:0001638,4.99e-10,9;UBERON:0003920,4.99e-10,9;UBERON:0004582,4.99e-10,9;UBERON:0002465,7.35e-10,10;UBERON:0005090,1.79e-08,2;UBERON:0001630,1.79e-08,2 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0.56738522469114,0,0.502497330513487,0,0.434377689410233,0.605399502633369,0.736555271975129,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,1.70763890732835,0.587237189370939,0.764546456250458,1.32171328579026,0.560508562981536,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0.838998872419812,0.550236083880135,0.626984899610432,0.258416759169329,4.62496141492723,4.68608857870538,0.402829317109147,0.760272105718513,0.24406205754817,0,0,1.16089646769304,0.44905874525234,0.788280363383256,1.53316637465883,1.89853131913626,1.28241220751285,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88732895522148,1.85194205030644,2.47330397904978,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0.869932992075073,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36968812325356,0,0,0,0,0,0,0,0.703347082052564,0,0,0,1.19548792950642,0.828851746593443,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.60298219312704,0,0.663475559587348,0,0.87754158861589,0,0,1.00035336054936,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0.611030144933625,0,0,0,0.269604531922708,2.40773294189637,0,1.094728735294,0,0,1.18375320854817,0,0.30607276163049,1.32691817219825,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0.837847203816763,0.916641696046735,5.0251111720377,0,0,2.00854311697685,2.08268764708851,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0.157363764404994,0,0.537862017998534,0,0.714695326373367,5.29673576292345,0,0,0,0,0,0.082092520749339,0,0,0.58620893471233,0,0.904980694530854,1.19009341568421,0,0,7.58190629230632,2.51526888159466,3.72815149812476,0,0,0.121792598380896,0,2.72008901684737,3.0082787282724,2.75711019087115,6.22957998348628,0,0,0.610131324509816,0.625954653532499,2.86704597845036,0.554645257684261,0.496771223531068,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443565449968902,0.477890301491107,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.321146125482298,0,1.11743701340006,0,0,0.207471757392654,0.161475645631851,1.42769420259154,0,0,0,0,0,3.4517996303005,0,0.977734268540344,0,0.781514011233092,0,0,0,0.337687923091973,1.56215619722769,0.826747186004736,0.19024743058172,0.546974809018219,0,0.992422356778588,0,0,0.535701835878287,1.3451348888753,0,0.455324382702595,0.975726071789027,0,0,0.271878931907327,0.197318320688547,0,0.111231401892069,0.156986185701028,0.628462359664008,0,0,0,0,0.214429632529969,0,0.23248285073625,0,0,0,0,0,0,0.354996002191696,0,0.423387050190929,0,0,0,0,0,0,1.29485767437579,0.923965261706223,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0.848915739187391,0.218559560503957,0,0.245148321753905,0,0.588925401344836,1.18818560130834,1.6906229103336,0,1.69171052363736,2.57831551894309,0,0,0,0,0.730336388246517,0,0.716697915757256,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0.827463966895162,1.70587185520785,0.714193294391221,0,0.124149428591716,0,0.763765899337979,4.85081253499726,1.74173398317569,0.684466602170562,0.404112318087525,1.36272190246085,0.665320713092027,0,0,0,0,2.34640942403454,0.611207220914332,1.62758471326295,0.665756774185513,1.81146414231924,0 | |||
|short_description=p33@TCF4 | |||
}} |
Revision as of 19:27, 20 January 2014
Short description: | p33@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_33_at_TCF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_ENST00000543082, NM_001243231, uc002lfy.2_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B3KUC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.14e-16 | 6 |
endothelial cell of lymphatic vessel | 1.14e-16 | 6 |
vascular lymphangioblast | 1.14e-16 | 6 |
endothelial cell of vascular tree | 2.37e-11 | 24 |
vein endothelial cell | 6.66e-10 | 6 |
endothelial cell | 5.02e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.17e-13 | 114 |
lymphatic vessel | 2.04e-12 | 8 |
lymph vasculature | 2.04e-12 | 8 |
lymphatic part of lymphoid system | 2.04e-12 | 8 |
vein | 4.99e-10 | 9 |
venous blood vessel | 4.99e-10 | 9 |
venous system | 4.99e-10 | 9 |
lymphoid system | 7.35e-10 | 10 |
muscle structure | 1.79e-08 | 2 |
muscle organ | 1.79e-08 | 2 |