FFCP PHASE1:Hg19::chr18:21977748..21977821,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114876 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16398 | |||
|TSSclassifier=strong | |||
|UniProt=E7ER58 | |||
|association_with_transcript=0bp_to_ENST00000399441,uc002kve.2_5end | |||
|description=CAGE_peak_1_at_OSBPL1A_5end | |||
|id=chr18:21977748..21977821,- | |||
|ontology_enrichment_celltype=CL:0000557!2.16e-16!71;CL:0000839!1.53e-14!70;CL:0002194!1.73e-14!63;CL:0000576!1.73e-14!63;CL:0000040!1.73e-14!63;CL:0000559!1.73e-14!63;CL:0002009!2.27e-14!65;CL:0000763!1.20e-13!112;CL:0000049!1.20e-13!112;CL:0000766!6.26e-13!76;CL:0000860!1.91e-08!45;CL:0002057!5.48e-08!42;CL:0000333!2.98e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.83e-10;39!CL:0000234;2.83e-10;39!CL:0000860;7.07e-09;33!CL:0002057;7.07e-09;33!CL:0000576;1.16e-07;48!CL:0000763;8.67e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,9.13e-17,67;CL:0002194,7.30e-15,59;CL:0000576,7.30e-15,59;CL:0000040,7.30e-15,59;CL:0000559,7.30e-15,59;CL:0000839,7.49e-15,66;CL:0002009,1.01e-14,61;CL:0000763,7.75e-14,108;CL:0000049,7.75e-14,108;CL:0000766,3.21e-13,72;CL:0000473,5.45e-11,48;CL:0000234,5.45e-11,48;CL:0000860,5.41e-08,42;CL:0002057,5.41e-08,42;CL:0000333,2.95e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.42e-16!86;UBERON:0002371!8.34e-15!80;UBERON:0004765!4.63e-13!101;UBERON:0001434!4.63e-13!101;UBERON:0000073!2.43e-12!94;UBERON:0001016!2.43e-12!94;UBERON:0000922!1.82e-10!612;UBERON:0000468!2.71e-10!659;UBERON:0002193!4.35e-10!112;UBERON:0002390!5.61e-10!102;UBERON:0003061!5.61e-10!102;UBERON:0005743!9.39e-10!86;UBERON:0001017!3.54e-09!82;UBERON:0002050!5.92e-09!605;UBERON:0005423!5.92e-09!605;UBERON:0000923!1.08e-08!604;UBERON:0005291!1.08e-08!604;UBERON:0006598!1.08e-08!604;UBERON:0002532!1.08e-08!604;UBERON:0000062!1.68e-08!511;UBERON:0000924!9.12e-08!173;UBERON:0006601!9.12e-08!173;UBERON:0002405!1.16e-07!115;UBERON:0000955!1.47e-07!69;UBERON:0006238!1.47e-07!69;UBERON:0000467!3.36e-07!625;UBERON:0000480!6.03e-07!626;UBERON:0004121!8.54e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,4.26e-16,82;UBERON:0002371,4.73e-15,76;UBERON:0004765,2.13e-13,90;UBERON:0002405,8.51e-13,93;UBERON:0001434,1.20e-12,100;UBERON:0001016,1.43e-11,89;UBERON:0002193,3.51e-10,108;UBERON:0002390,4.32e-10,98;UBERON:0003061,4.32e-10,98;UBERON:0000923,4.97e-09,560;UBERON:0010316,4.97e-09,560;UBERON:0005291,4.97e-09,560;UBERON:0006598,4.97e-09,560;UBERON:0010317,4.97e-09,560;UBERON:0002532,4.97e-09,560;UBERON:0001017,5.09e-09,81;UBERON:0000922,5.65e-09,592;UBERON:0002050,1.74e-08,564;UBERON:0004121,4.69e-08,171;UBERON:0000924,4.69e-08,171;UBERON:0006601,4.69e-08,171;UBERON:0000955,2.09e-07,68;UBERON:0006238,2.09e-07,68;UBERON:0005423,4.78e-07,581;UBERON:0002346,7.37e-07,86 | |||
|phase1_expression=7.44881355009282,6.85121676451146,4.51054093107108,5.00366491765652,6.25745532198203,1.74467704820074,10.1319951267324,8.2123583545488,8.61912573059467,4.42321085702716,4.88460817580699,2.18441372130172,1.05506791291381,7.92104658944298,10.2733186475654,4.03395087871065,1.80808358407193,4.38186054232424,4.39139518911456,8.98783723960552,9.38403179723564,3.13454721478088,13.7393273822907,10.1287074553934,9.91786852798942,0,0,0,46.4169846681707,6.1412703695554,13.1593704818665,10.1136334692682,5.72291245678675,3.69754010166788,0,0,23.7816355861226,19.3898392986157,8.22232234627581,11.2845652772243,45.4548412707046,56.0336042212835,61.5605606645706,13.0858414901608,17.3822934096852,11.6440349370152,15.8051745095866,25.4924090573532,22.6085650753426,25.3169305243492,29.2023205443175,17.4996850117553,24.8216890130365,23.2374486090177,21.6682378550947,15.0593871634084,21.8324920046277,16.6295378489363,14.0798590490615,21.5022448140983,20.4587880255693,20.1209293113897,23.3372479417309,10.6556187633174,5.22376629531451,17.0215567407342,6.85104473895132,37.184802457998,19.2948679815475,26.4970390540242,10.2917915447673,12.1531619875896,7.59509729858123,7.81644559354185,9.14198489849687,12.9988360215193,14.2657361556049,9.6113211418564,11.0900654820985,3.99017841237748,3.58050018958362,3.10529061399878,0,1.63841583378639,0,1.28019066769952,0.400395987036012,0,0,0,0,0.587237189370939,0.382273228125229,13.2171328579026,10.6496626966492,23.1777994602068,0.590129310341499,0.786021525498329,5.14003747498773,0,1.30368906653436,0,1.94826728407911,1.33692548262208,3.82987679717288,3.98761010250518,2.16643091012012,0.384273959177026,0.650296737799391,0.164437904603676,0.276350017785848,1.44901542867526,3.70716407905151,3.74557159325598,1.04535523804977,2.83273356743915,3.44898444241729,2.74901956386104,2.27717722817553,0.637130828648193,1.95325036156926,0,3.312652619711,2.94369205655162,0,1.18388626022008,2.46338399076314,2.21767417547206,1.60464117470104,1.15859523106239,14.6284119788377,2.68280343881454,3.32442660793179,10.4817354191524,4.51204119572301,5.06962816362883,3.1811437882044,0.973269740605272,11.5332476940163,7.53879951372717,7.72946114099509,8.64461898284903,5.82872461268068,6.3033355273353,62.3130995816992,60.4230188428457,42.0147155239614,10.2550968451297,10.8679033048224,9.65789503456869,3.37896092523399,13.763753521698,4.51282652089873,7.91431118693613,7.1314904155684,5.77747888074142,6.47884396264113,25.0664256394249,30.5958985910571,16.4013100254688,4.02829317109147,3.80136052859256,3.90499292077071,7.35326160691737,4.0507097394088,12.4126622314871,17.2887616922151,15.6529957871818,12.2653309972707,9.49265659568129,5.49605231791222,0,3.87780264148325,2.18047026071267,2.98183171017191,6.07826455989983,8.474187572046,10.6129549677061,5.32002573297536,7.8494864019923,1.06748995729705,3.7000132262574,15.5605517699883,18.1859407294079,17.0000379237997,8.1733010928263,8.06646294271999,9.84150013701946,17.4809643024979,23.3893446833224,15.0943167357319,16.9105678047021,14.7304379375,17.8372524511856,10.2077085627447,10.6865856061238,23.4549523268988,7.12801714369232,5.93440630268536,7.28129089550421,6.46756327634615,9.25848626747364,14.01327422566,11.9137569658199,0.438977620880838,2.45190236639216,5.10809400282429,11.9103792318022,8.25192324168765,3.41691822109708,4.23863802319124,8.40255069036326,7.21367704669072,5.66809188100384,3.35010341396862,11.3080142601648,4.28722822709274,8.58274832429989,5.98324341174946,10.6686397500416,6.39017266529906,4.53384442024381,7.46066606166146,2.31913023795956,2.45471508531751,2.29443676311203,26.224346817863,28.0963108841549,15.2214065159069,21.0431941681202,13.3730050964083,20.4387321082465,1.56449532329816,5.14592750554308,6.90674606762403,6.03678306441573,12.271951188383,6.86179440231095,6.40621822296786,6.02527574708705,7.05881425487321,7.62578054323422,5.69449485866632,8.76403503041069,6.67152981426177,10.0034260806062,7.38155454624648,2.80483547606892,4.5273141246454,8.82052268313252,1.26755034821831,4.91413608338813,4.72631925345123,6.18048339180511,5.411491295897,5.66173773985134,3.84125998930189,4.49607013030478,3.71957197923034,9.90696363196267,8.14520763275812,7.27954349695705,7.21656710126366,12.5204837373083,4.93116515790451,9.09508620894765,6.94478268864916,9.13219930726072,7.11183958163348,5.15091697256924,51.459354272266,28.3145160818478,37.752315221337,0.93733833986777,0.671928512795438,0.425325291727159,2.95543124919399,3.77824120068151,1.91691339582606,8.86793828212698,12.5909260638913,25.7086863270557,27.2386711958057,27.2683656200981,30.415491365949,32.0870277468953,56.2643746608226,15.3965201420435,22.7248758874345,25.529159916733,60.0235508524214,10.2039286754278,12.2068819273318,8.43390286940925,9.43683525031778,21.4593867511129,4.22651376278,10.9034627799797,9.36066932202295,2.05765899409714,7.09245660116391,4.79559922228979,5.57614175266775,3.7983512377401,12.3486050517115,6.18898750158097,8.88479871856365,15.0470855857352,4.220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| |||
|short_description=p1@OSBPL1A | |||
}} |
Revision as of 18:49, 20 January 2014
Short description: | p1@OSBPL1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OSBPL1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000399441, uc002kve.2_5end |
EntrezGene: | OSBPL1A |
HGNC: | 16398 |
UniProt: | E7ER58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 9.13e-17 | 67 |
monopoietic cell | 7.30e-15 | 59 |
monocyte | 7.30e-15 | 59 |
monoblast | 7.30e-15 | 59 |
promonocyte | 7.30e-15 | 59 |
myeloid lineage restricted progenitor cell | 7.49e-15 | 66 |
macrophage dendritic cell progenitor | 1.01e-14 | 61 |
myeloid cell | 7.75e-14 | 108 |
common myeloid progenitor | 7.75e-14 | 108 |
myeloid leukocyte | 3.21e-13 | 72 |
defensive cell | 5.45e-11 | 48 |
phagocyte | 5.45e-11 | 48 |
classical monocyte | 5.41e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.41e-08 | 42 |
migratory neural crest cell | 2.95e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
bone element | 4.26e-16 | 82 |
bone marrow | 4.73e-15 | 76 |
skeletal element | 2.13e-13 | 90 |
immune system | 8.51e-13 | 93 |
skeletal system | 1.20e-12 | 100 |
nervous system | 1.43e-11 | 89 |
hemolymphoid system | 3.51e-10 | 108 |
hematopoietic system | 4.32e-10 | 98 |
blood island | 4.32e-10 | 98 |
germ layer | 4.97e-09 | 560 |
germ layer / neural crest | 4.97e-09 | 560 |
embryonic tissue | 4.97e-09 | 560 |
presumptive structure | 4.97e-09 | 560 |
germ layer / neural crest derived structure | 4.97e-09 | 560 |
epiblast (generic) | 4.97e-09 | 560 |
central nervous system | 5.09e-09 | 81 |
embryo | 5.65e-09 | 592 |
embryonic structure | 1.74e-08 | 564 |
ectoderm-derived structure | 4.69e-08 | 171 |
ectoderm | 4.69e-08 | 171 |
presumptive ectoderm | 4.69e-08 | 171 |
brain | 2.09e-07 | 68 |
future brain | 2.09e-07 | 68 |
developing anatomical structure | 4.78e-07 | 581 |
neurectoderm | 7.37e-07 | 86 |