FFCP PHASE1:Hg19::chr18:14970228..14970238,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C181 | |||
|description=CAGE_peak_at_chr18:14970228..14970238,- | |||
|id=chr18:14970228..14970238,- | |||
|ontology_enrichment_celltype=CL:1000415!5.09e-10!2;CL:0002552!6.17e-09!5;CL:0000197!7.67e-08!6;CL:0000098!7.67e-08!6;CL:0002167!7.67e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000322;2.59e-12;3!CL:0000243;9.25e-09;15!CL:0000125;9.25e-09;15!CL:0000095;6.15e-08;17!CL:0000197;8.48e-07;6!CL:0000098;8.48e-07;6!CL:0002167;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.59e-12,3;CL:0000243,9.62e-09,15;CL:0000125,9.62e-09,15;CL:0000030,9.62e-09,15;CL:0000339,9.62e-09,15;CL:0000095,6.36e-08,17;CL:0000123,6.36e-08,17;CL:0000197,8.97e-07,6;CL:0000098,8.97e-07,6;CL:0002167,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.42e-13;10!CL:0000339;9.25e-09;15 | |||
|ontology_enrichment_disease=DOID:162!2.52e-07!235;DOID:14566!4.66e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:4231;9.07e-18;2!DOID:3910;9.07e-18;2!DOID:1907;9.07e-18;2!DOID:3093;5.37e-12;11!DOID:3908;6.55e-08;5!DOID:1115;1.25e-07;20!DOID:201;8.48e-07;6!DOID:0060100;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,6.48e-18,2;DOID:1907,6.48e-18,2;DOID:3910,9.07e-18,2;DOID:3093,5.67e-12,11;DOID:3908,6.55e-08,5;DOID:1115,1.17e-07,20;DOID:201,7.58e-07,6;DOID:0060100,7.58e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002110!5.96e-07!3;UBERON:0006242!5.96e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;9.07e-18;2!UBERON:0002173;9.07e-18;2!UBERON:0002186;9.07e-18;2!UBERON:0004821;2.59e-12;3!UBERON:0007499;2.59e-12;3!UBERON:0003215;2.59e-12;3!UBERON:0010368;2.59e-12;3!UBERON:0009911;2.59e-12;3!UBERON:0002299;2.59e-12;3!UBERON:0006524;2.59e-12;3!UBERON:0008874;2.59e-12;3!UBERON:0002169;2.59e-12;3!UBERON:0004894;2.59e-12;3!UBERON:0009856;1.44e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,9.07e-18,2;UBERON:0002173,9.07e-18,2;UBERON:0002186,9.07e-18,2;UBERON:0004821,2.59e-12,3;UBERON:0003215,2.59e-12,3;UBERON:0010368,2.59e-12,3;UBERON:0009911,2.59e-12,3;UBERON:0002299,2.59e-12,3;UBERON:0006524,2.59e-12,3;UBERON:0008874,2.59e-12,3;UBERON:0002169,2.59e-12,3;UBERON:0004894,2.59e-12,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61246251376468,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.919463387397059,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,1.10391690523754,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0.195551382734803,0.320635281006135,0,0,0,0,0,0.14405479798815,0,0,1.49494626680975,1.04602846312333,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62280471891892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0.414706207840855,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0.911579868532147,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,1.84105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:14970228..14970238,- | |||
}} |
Revision as of 18:41, 20 January 2014
Short description: | p@chr18:14970228..14970238, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:14970228..14970238, - |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.59e-12 | 3 |
glial cell (sensu Vertebrata) | 9.62e-09 | 15 |
glial cell | 9.62e-09 | 15 |
glioblast | 9.62e-09 | 15 |
glioblast (sensu Vertebrata) | 9.62e-09 | 15 |
neuron associated cell | 6.36e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 6.36e-08 | 17 |
receptor cell | 8.97e-07 | 6 |
sensory epithelial cell | 8.97e-07 | 6 |
olfactory epithelial cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 9.07e-18 | 2 |
alveolar duct | 9.07e-18 | 2 |
bronchiole | 9.07e-18 | 2 |
pulmonary alveolus epithelium | 2.59e-12 | 3 |
alveolus | 2.59e-12 | 3 |
pulmonary lobule | 2.59e-12 | 3 |
lobule | 2.59e-12 | 3 |
alveolus of lung | 2.59e-12 | 3 |
alveolar system | 2.59e-12 | 3 |
pulmonary acinus | 2.59e-12 | 3 |
alveolar sac | 2.59e-12 | 3 |
alveolar wall | 2.59e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 6.48e-18 | 2 |
malignant fibroxanthoma | 6.48e-18 | 2 |
lung adenocarcinoma | 9.07e-18 | 2 |
nervous system cancer | 5.67e-12 | 11 |
non-small cell lung carcinoma | 6.55e-08 | 5 |
sarcoma | 1.17e-07 | 20 |
connective tissue cancer | 7.58e-07 | 6 |
musculoskeletal system cancer | 7.58e-07 | 6 |