FFCP PHASE1:Hg19::chr18:3625092..3625104,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C432 | |||
|description=CAGE_peak_at_chr18:3625092..3625104,+ | |||
|id=chr18:3625092..3625104,+ | |||
|ontology_enrichment_celltype=CL:0000548!7.44e-12!679;CL:0000004!7.44e-12!679;CL:0000255!7.44e-12!679;CL:0000012!1.33e-11!682;CL:0000003!1.93e-08!722;CL:0000063!2.73e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.11e-20;33!CL:0002057;7.11e-20;33!CL:0000473;6.87e-15;39!CL:0000234;6.87e-15;39!CL:0000511;1.10e-10;1!CL:0002625;1.10e-10;1!CL:0000216;1.10e-10;1!CL:0000576;5.29e-09;48!CL:0000766;7.30e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.96e-17,42;CL:0002057,1.96e-17,42;CL:0000473,4.19e-15,48;CL:0000234,4.19e-15,48;CL:0002194,7.76e-12,59;CL:0000576,7.76e-12,59;CL:0000040,7.76e-12,59;CL:0000559,7.76e-12,59;CL:0002009,2.05e-11,61;CL:0000511,8.22e-11,1;CL:0002625,8.22e-11,1;CL:0000216,8.22e-11,1;CL:0000839,1.81e-10,66;CL:0000557,2.69e-10,67;CL:0000766,1.66e-09,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.94e-12;42 | |||
|ontology_enrichment_disease=DOID:120!9.88e-09!27;DOID:193!8.26e-08!29;DOID:305!1.87e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.10e-10;1!UBERON:0001343;1.10e-10;1!UBERON:0004910;1.10e-10;1!UBERON:0004813;1.10e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,8.22e-11,1;UBERON:0001343,8.22e-11,1;UBERON:0004910,8.22e-11,1;UBERON:0005154,8.22e-11,1;UBERON:0005295,8.22e-11,1;UBERON:0004813,8.22e-11,1;UBERON:0005297,8.22e-11,1;UBERON:0005294,8.22e-11,1;UBERON:0010141,8.22e-11,1;UBERON:0005891,8.22e-11,1;UBERON:0002371,6.02e-09,76;UBERON:0001474,3.29e-08,82;UBERON:0003081,3.73e-08,203;UBERON:0004765,2.24e-07,90;UBERON:0002405,4.22e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0.28769239232215,0.512321413058201,0,3.10271112662957,2.5819387343353,1.35426486594342,0,0,0,3.06083892370903,3.53021929783703,0.639337125799041,0,0,0,2.03146467040009,7.37600792098482,0.622822248995575,0,0,0,0,6.62899744777616,3.16462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50191214764944,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0.538168907066586,0,0,0,0,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0,0.473227200159376,0.337169380156203,0.723033089650446,0.330881918197182,0,0.71181185733329,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.364182336013434,0,0.451199612907412,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.330569830721956,0,0.510450849978337,0,0,1.25924938732256,0,0.616067160352178,0.532306030317022,0,0.18532421910392,1.00187420719394,0,0.316379424718726,0,0,0,0.636406495851874,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,3.16950440270266,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0.286822704408103,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0.19606253431774,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0.661983911750998,0,0,0,0,0,0,0.261177619741208,0,0,0.19351266257817,0.146178634172371,0.410577285266046,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0.105600336519406,0,0.767660789277781,0,0,0,0,0,0,0,0.328370082997356,0.340776043570843,0,0,0,0,0,0.171086837884329,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16856654923612,0,0.189403005275089,0,0,1.60188047877847,0.302461847526478,0.15543720058278,0.443565449968902,0.63718706865481,0,0,0.414706207840855,0,0.521745061811734,0.450772826991655,1.14241563650639,0.406870733204662,0.909243296012797,0,0.464033759878494,1.19428766609585,0,0,0,0,0.385239660814607,0,0.521988583930423,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0.675769762612291,0.256241518587947,0,0,0,0,0.398594520940089,0.490696182767533,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,1.1796972334774,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0.62041277132864,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.853818767021724,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:3625092..3625104,+ | |||
}} |
Revision as of 18:23, 20 January 2014
Short description: | p@chr18:3625092..3625104, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:3625092..3625104, + |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.96e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-17 | 42 |
defensive cell | 4.19e-15 | 48 |
phagocyte | 4.19e-15 | 48 |
monopoietic cell | 7.76e-12 | 59 |
monocyte | 7.76e-12 | 59 |
monoblast | 7.76e-12 | 59 |
promonocyte | 7.76e-12 | 59 |
macrophage dendritic cell progenitor | 2.05e-11 | 61 |
androgen binding protein secreting cell | 8.22e-11 | 1 |
seminiferous tubule epithelial cell | 8.22e-11 | 1 |
Sertoli cell | 8.22e-11 | 1 |
myeloid lineage restricted progenitor cell | 1.81e-10 | 66 |
granulocyte monocyte progenitor cell | 2.69e-10 | 67 |
myeloid leukocyte | 1.66e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 8.22e-11 | 1 |
seminiferous tubule of testis | 8.22e-11 | 1 |
epithelium of male gonad | 8.22e-11 | 1 |
epithelial cord | 8.22e-11 | 1 |
sex cord | 8.22e-11 | 1 |
seminiferous tubule epithelium | 8.22e-11 | 1 |
testis sex cord | 8.22e-11 | 1 |
genital ridge | 8.22e-11 | 1 |
primitive sex cord of indifferent gonad | 8.22e-11 | 1 |
coelomic epithelium | 8.22e-11 | 1 |
bone marrow | 6.02e-09 | 76 |
bone element | 3.29e-08 | 82 |
lateral plate mesoderm | 3.73e-08 | 203 |
skeletal element | 2.24e-07 | 90 |
immune system | 4.22e-07 | 93 |