FFCP PHASE1:Hg19::chr17:80730122..80730135,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:80730122..80730135,+ | |||
|id=chr17:80730122..80730135,+ | |||
|ontology_enrichment_celltype=CL:0000625!2.67e-13!11;CL:0000623!1.60e-10!3;CL:0000825!1.60e-10!3;CL:0000791!7.92e-10!18;CL:0000789!7.92e-10!18;CL:0002420!7.92e-10!18;CL:0002419!7.92e-10!18;CL:0000790!7.92e-10!18;CL:0000838!1.55e-09!52;CL:0000842!1.92e-09!3;CL:0000542!2.73e-09!53;CL:0000051!2.73e-09!53;CL:0002087!3.03e-08!119;CL:0000738!9.03e-08!140;CL:0000224!3.53e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000623;5.85e-25;3!CL:0000039;3.40e-24;7!CL:0000586;3.40e-24;7!CL:0000313;3.91e-19;1!CL:0000159;2.99e-10;2!CL:0000625;1.75e-07;11!CL:0000767;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.87e-25,3;CL:0000825,4.87e-25,3;CL:0000039,3.54e-24,7;CL:0000586,3.54e-24,7;CL:0000313,4.69e-19,1;CL:0000159,3.27e-10,2;CL:0000625,1.62e-07,11;CL:0000767,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.12e-29;10!UBERON:0005564;2.12e-29;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;3.91e-19;1!DOID:3095;3.89e-08;22!DOID:2994;3.89e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.69e-19,1;DOID:3095,3.93e-08,22;DOID:2994,3.93e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.40e-09!15;UBERON:0000179!4.40e-09!15;UBERON:0000463!4.40e-09!15;UBERON:0003135!7.56e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.88e-21;8!UBERON:0004911;3.91e-19;1!UBERON:0003135;1.16e-15;11!UBERON:0000991;3.11e-14;21!UBERON:0004909;2.99e-10;2!UBERON:0003101;3.89e-08;22!UBERON:0000079;3.89e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.98e-21,8;UBERON:0004911,4.69e-19,1;UBERON:0003135,1.19e-15,11;UBERON:0000991,3.27e-14,21;UBERON:0009196,3.27e-14,21;UBERON:0009117,3.27e-14,21;UBERON:0005564,3.27e-14,21;UBERON:0004176,1.39e-13,22;UBERON:0004909,3.27e-10,2;UBERON:0003101,3.93e-08,22;UBERON:0000079,3.93e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,1.53531759238885,0.464448369948228,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,1.17030546773475,0,0,0,0.334231370655521,0,0,0.270803863765016,0.25618263945135,0.390178042679635,0.328875809207352,0.276350017785848,0,0,0,0,0.113309342697566,0,0.68725489096526,0.253019692019503,0,0.651083453856419,0,0.301150238155546,0.895906278080929,0,0.236777252044017,0,0.80642697289893,2.40696176205157,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,3.66566877261179,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0.648473311192717,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,1.34226518157351,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0.0999411559249289,0.178553938605658,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,3.56960904096936,5.61156551057677,4.41095517767256,0,0.0757786982182394,0,0,0,0,0,0,0.806971285846153,0,0,0,0,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:80730122..80730135,+ | |||
}} |
Revision as of 18:12, 20 January 2014
Short description: | p@chr17:80730122..80730135, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:80730122..80730135, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.87e-25 | 3 |
pro-NK cell | 4.87e-25 | 3 |
germ line cell | 3.54e-24 | 7 |
germ cell | 3.54e-24 | 7 |
serous secreting cell | 4.69e-19 | 1 |
seromucus secreting cell | 3.27e-10 | 2 |
CD8-positive, alpha-beta T cell | 1.62e-07 | 11 |
basophil | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 2.98e-21 | 8 |
epithelium of female gonad | 4.69e-19 | 1 |
male reproductive organ | 1.19e-15 | 11 |
gonad | 3.27e-14 | 21 |
indifferent external genitalia | 3.27e-14 | 21 |
indifferent gonad | 3.27e-14 | 21 |
gonad primordium | 3.27e-14 | 21 |
external genitalia | 1.39e-13 | 22 |
epithelium of gonad | 3.27e-10 | 2 |
male organism | 3.93e-08 | 22 |
male reproductive system | 3.93e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.69e-19 | 1 |
germ cell and embryonal cancer | 3.93e-08 | 22 |
germ cell cancer | 3.93e-08 | 22 |