FFCP PHASE1:Hg19::chr17:78180739..78180750,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK095416_5end | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_2_at_AK095416_5end | |||
|id=chr17:78180739..78180750,+ | |||
|ontology_enrichment_celltype=CL:0002194!8.32e-88!63;CL:0000576!8.32e-88!63;CL:0000040!8.32e-88!63;CL:0000559!8.32e-88!63;CL:0000766!3.57e-86!76;CL:0000839!6.17e-86!70;CL:0002009!7.88e-85!65;CL:0000557!1.36e-84!71;CL:0002057!2.65e-67!42;CL:0000860!2.80e-62!45;CL:0000763!3.13e-55!112;CL:0000049!3.13e-55!112;CL:0002087!1.85e-46!119;CL:0000738!2.75e-46!140;CL:0002031!3.44e-44!124;CL:0000037!1.19e-35!172;CL:0000566!1.19e-35!172;CL:0002032!4.28e-34!165;CL:0000837!4.28e-34!165;CL:0000988!4.33e-33!182;CL:0000235!8.75e-13!10;CL:0000134!3.60e-12!358;CL:0002320!1.01e-11!365;CL:0000219!7.32e-11!390;CL:0002619!1.21e-10!3;CL:0002393!4.01e-09!9;CL:0002397!4.01e-09!9;CL:0000048!2.81e-08!430;CL:0000723!5.16e-08!436;CL:0000034!1.13e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.31e-38;6!CL:0000473;3.52e-33;39!CL:0000234;3.52e-33;39!CL:0000840;1.97e-22;5!CL:0000860;6.19e-19;33!CL:0002057;6.19e-19;33!CL:0000990;3.52e-15;8!CL:0000451;1.56e-12;10!CL:0000766;3.78e-11;69!CL:0000763;1.12e-09;100!CL:0000576;1.62e-08;48!CL:0000738;2.23e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,6.85e-45,59;CL:0000576,6.85e-45,59;CL:0000040,6.85e-45,59;CL:0000559,6.85e-45,59;CL:0002009,2.08e-43,61;CL:0000839,4.32e-40,66;CL:0000557,1.74e-39,67;CL:0000235,5.48e-38,6;CL:0000766,1.05e-36,72;CL:0000473,2.61e-34,48;CL:0000234,2.61e-34,48;CL:0000763,3.32e-24,108;CL:0000049,3.32e-24,108;CL:0002087,1.13e-22,115;CL:0000840,1.97e-22,5;CL:0001029,1.97e-22,5;CL:0002031,1.10e-21,120;CL:0000738,5.24e-19,136;CL:0000860,6.33e-16,42;CL:0002057,6.33e-16,42;CL:0002032,7.09e-16,161;CL:0000837,7.09e-16,161;CL:0000990,3.52e-15,8;CL:0000037,3.65e-15,168;CL:0000988,2.49e-14,177;CL:0000451,1.56e-12,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.40e-11;42!CL:0000049;1.47e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.24e-74!80;UBERON:0001474!3.64e-68!86;UBERON:0002390!2.58e-67!102;UBERON:0003061!2.58e-67!102;UBERON:0002193!2.27e-60!112;UBERON:0004765!1.44e-56!101;UBERON:0001434!1.44e-56!101;UBERON:0002405!7.63e-51!115;UBERON:0002204!3.83e-30!167;UBERON:0003081!4.55e-26!216;UBERON:0002384!6.58e-12!375;UBERON:0000926!8.85e-11!448;UBERON:0004120!8.85e-11!448;UBERON:0006603!8.85e-11!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.63e-35,76;UBERON:0001474,3.76e-32,82;UBERON:0004765,3.18e-29,90;UBERON:0002405,2.96e-28,93;UBERON:0002390,9.06e-27,98;UBERON:0003061,9.06e-27,98;UBERON:0001434,3.24e-26,100;UBERON:0002193,3.32e-24,108;UBERON:0002204,2.91e-15,167;UBERON:0003081,2.49e-12,203;UBERON:0000926,1.94e-07,315;UBERON:0004120,1.94e-07,315;UBERON:0006603,1.94e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0,0.223915474239924,0.647787332037959,0.257575567634187,1.74477886535478,1.88937971844405,0.727752183563449,0.464858073811369,0.411167888021826,0.619412741790207,0.28769239232215,1.0246428261164,0,0,0.645484683583826,0,0.752969358170419,0.818718450173537,0,2.14258724659632,0.641858054152187,0,1.31940520074686,1.79517291859469,0,0.290209238628584,0,2.4912889959823,0.75374599577023,0.521482918420201,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0.425208599930087,0.419317291016752,0.44931452458598,0.450530678524519,0.16072558669708,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,5.19275829847493,5.22389211897802,4.25465473660369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,3.97807250736704,1.18904929830983,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@AK095416 | |||
}} |
Revision as of 17:51, 20 January 2014
Short description: | p2@AK095416 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK095416_5end |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | 0bp_to_AK095416_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 6.85e-45 | 59 |
monocyte | 6.85e-45 | 59 |
monoblast | 6.85e-45 | 59 |
promonocyte | 6.85e-45 | 59 |
macrophage dendritic cell progenitor | 2.08e-43 | 61 |
myeloid lineage restricted progenitor cell | 4.32e-40 | 66 |
granulocyte monocyte progenitor cell | 1.74e-39 | 67 |
macrophage | 5.48e-38 | 6 |
myeloid leukocyte | 1.05e-36 | 72 |
defensive cell | 2.61e-34 | 48 |
phagocyte | 2.61e-34 | 48 |
myeloid cell | 3.32e-24 | 108 |
common myeloid progenitor | 3.32e-24 | 108 |
nongranular leukocyte | 1.13e-22 | 115 |
immature conventional dendritic cell | 1.97e-22 | 5 |
common dendritic progenitor | 1.97e-22 | 5 |
hematopoietic lineage restricted progenitor cell | 1.10e-21 | 120 |
leukocyte | 5.24e-19 | 136 |
classical monocyte | 6.33e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.33e-16 | 42 |
hematopoietic oligopotent progenitor cell | 7.09e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.09e-16 | 161 |
conventional dendritic cell | 3.52e-15 | 8 |
hematopoietic stem cell | 3.65e-15 | 168 |
hematopoietic cell | 2.49e-14 | 177 |
dendritic cell | 1.56e-12 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.63e-35 | 76 |
bone element | 3.76e-32 | 82 |
skeletal element | 3.18e-29 | 90 |
immune system | 2.96e-28 | 93 |
hematopoietic system | 9.06e-27 | 98 |
blood island | 9.06e-27 | 98 |
skeletal system | 3.24e-26 | 100 |
hemolymphoid system | 3.32e-24 | 108 |
musculoskeletal system | 2.91e-15 | 167 |
lateral plate mesoderm | 2.49e-12 | 203 |
mesoderm | 1.94e-07 | 315 |
mesoderm-derived structure | 1.94e-07 | 315 |
presumptive mesoderm | 1.94e-07 | 315 |