FFCP PHASE1:Hg19::chr17:77967257..77967276,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:77967257..77967276,- | |||
|id=chr17:77967257..77967276,- | |||
|ontology_enrichment_celltype=CL:0000223!4.42e-17!59;CL:0000066!1.76e-13!254;CL:0002076!5.37e-12!43;CL:0000775!7.91e-11!3;CL:0002178!8.67e-10!3;CL:0002251!4.16e-08!21;CL:0000094!8.20e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.54e-36;3!CL:0000094;4.79e-24;8!CL:0000081;1.40e-17;11!CL:0000182;1.03e-15;12!CL:0000167;2.46e-13;1!CL:0000164;2.46e-13;1!CL:0000502;2.46e-13;1!CL:0000172;2.46e-13;1!CL:0000173;2.46e-13;1!CL:0000771;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.14e-36,3;CL:0000094,4.39e-24,8;CL:0000081,1.31e-17,11;CL:0000182,7.90e-16,12;CL:0000167,2.95e-13,1;CL:0000164,2.95e-13,1;CL:0000502,2.95e-13,1;CL:0000172,2.95e-13,1;CL:0000173,2.95e-13,1;CL:0002351,2.95e-13,1;CL:0000223,2.88e-09,58;CL:0000771,4.42e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.14e-22;13!UBERON:0004161;4.12e-17;11!CL:0002351;2.46e-13;1!UBERON:0001041;1.09e-09;30 | |||
|ontology_enrichment_disease=DOID:305!3.40e-27!106;DOID:0050687!2.53e-20!143;DOID:162!2.18e-12!235;DOID:14566!6.49e-12!239;DOID:7!2.06e-10!39;DOID:299!8.63e-10!25;DOID:3119!1.08e-09!14;DOID:3493!2.82e-07!2;DOID:1749!3.63e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4430;2.46e-13;1!DOID:7;1.27e-08;39!DOID:3493;2.66e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.95e-13,1;DOID:7,1.72e-10,39;DOID:305,7.47e-08,106;DOID:3493,2.74e-07,2;DOID:0050687,6.72e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.87e-13!169;UBERON:0000925!2.87e-13!169;UBERON:0006595!2.87e-13!169;UBERON:0004921!1.21e-12!129;UBERON:0004185!1.21e-12!129;UBERON:0001007!4.33e-12!155;UBERON:0001555!4.33e-12!155;UBERON:0007026!4.33e-12!155;UBERON:0005911!6.39e-12!82;UBERON:0000077!1.76e-11!130;UBERON:0007499!3.06e-10!25;UBERON:0009497!3.33e-10!25;UBERON:0000015!3.33e-10!25;UBERON:0002423!3.33e-10!25;UBERON:0006235!3.33e-10!25;UBERON:0004161!3.33e-10!25;UBERON:0001041!6.53e-10!98;UBERON:0009856!9.12e-10!26;UBERON:0008835!1.01e-09!22;UBERON:0003894!1.01e-09!22;UBERON:0009854!3.20e-09!23;UBERON:0000344!1.52e-08!12;UBERON:0003929!8.59e-08!54;UBERON:0002394!2.41e-07!4;UBERON:0003928!2.41e-07!4;UBERON:0000466!3.55e-07!126;UBERON:0002294!7.15e-07!7;UBERON:0001173!7.15e-07!7;UBERON:0004912!7.15e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.21e-11;25!UBERON:0002107;5.09e-10;19!UBERON:0006925;5.09e-10;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,2.61e-13,22;UBERON:0003894,2.61e-13,22;UBERON:0009854,9.95e-13,23;UBERON:0007499,1.05e-11,25;UBERON:0009497,1.05e-11,25;UBERON:0000015,1.05e-11,25;UBERON:0002423,1.05e-11,25;UBERON:0006235,1.05e-11,25;UBERON:0004161,1.05e-11,25;UBERON:0009856,2.97e-11,26;UBERON:0002107,4.31e-10,19;UBERON:0006925,4.31e-10,19;UBERON:0008836,4.31e-10,19;UBERON:0003929,1.83e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24304916763028,2.99161459204025,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0.246169610922139,0,0.449341755736634,5.19161406559267,0,0,0,0,0,0,0,0.7812832832557,0.349839999984783,0,0.682760689712998,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0.576361668616424,0,1.20116498503375,0.576219191952599,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.89079637537337,1.7307330260045,1.61768505250044,0.885847333632739,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0.344429959321631,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,1.41563668017288,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65005630761156,0.365753774946808,0,0,0,0,0,0,0,0.90356865631168,0,0.301925687133347,0,1.09279780251979,0.940634592723046,0,2.35676547101626,0,0,0,0,0,0,0,0.535661815816973,0,0.802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.325613074443898,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr17:77967257..77967276,- | |||
}} |
Revision as of 17:50, 20 January 2014
Short description: | p@chr17:77967257..77967276, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77967257..77967276, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.14e-36 | 3 |
granulocyte | 4.39e-24 | 8 |
blood cell | 1.31e-17 | 11 |
hepatocyte | 7.90e-16 | 12 |
peptide hormone secreting cell | 2.95e-13 | 1 |
enteroendocrine cell | 2.95e-13 | 1 |
type D enteroendocrine cell | 2.95e-13 | 1 |
somatostatin secreting cell | 2.95e-13 | 1 |
pancreatic D cell | 2.95e-13 | 1 |
progenitor cell of endocrine pancreas | 2.95e-13 | 1 |
endodermal cell | 2.88e-09 | 58 |
eosinophil | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 2.61e-13 | 22 |
liver primordium | 2.61e-13 | 22 |
digestive tract diverticulum | 9.95e-13 | 23 |
epithelial sac | 1.05e-11 | 25 |
epithelium of foregut-midgut junction | 1.05e-11 | 25 |
anatomical boundary | 1.05e-11 | 25 |
hepatobiliary system | 1.05e-11 | 25 |
foregut-midgut junction | 1.05e-11 | 25 |
septum transversum | 1.05e-11 | 25 |
sac | 2.97e-11 | 26 |
liver | 4.31e-10 | 19 |
digestive gland | 4.31e-10 | 19 |
liver bud | 4.31e-10 | 19 |
gut epithelium | 1.83e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.95e-13 | 1 |
disease of anatomical entity | 1.72e-10 | 39 |
carcinoma | 7.47e-08 | 106 |
signet ring cell adenocarcinoma | 2.74e-07 | 2 |
cell type cancer | 6.72e-07 | 143 |