FFCP PHASE1:Hg19::chr17:74732570..74732577,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6427 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10783 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-24bp_to_uc002jsw.1_5end | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_8_at_SRSF2_5end | |||
|id=chr17:74732570..74732577,- | |||
|ontology_enrichment_celltype=CL:0000738!5.17e-14!140;CL:0002087!1.23e-11!119;CL:0000037!2.48e-11!172;CL:0000566!2.48e-11!172;CL:0000988!1.55e-10!182;CL:0002032!1.84e-10!165;CL:0000837!1.84e-10!165;CL:0002031!4.96e-10!124;CL:0000542!5.11e-09!53;CL:0000051!5.11e-09!53;CL:0000838!1.76e-08!52;CL:0002393!1.37e-07!9;CL:0002397!1.37e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.05e-24;3!CL:0000624;2.57e-21;6!CL:0000791;7.35e-21;18!CL:0000789;7.35e-21;18!CL:0002419;7.35e-21;18!CL:0000084;8.42e-15;25!CL:0000226;4.42e-11;3!CL:0000842;4.42e-11;3!CL:0000542;3.39e-10;53!CL:0000625;4.18e-07;11!CL:0002087;4.96e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.44e-24,3;CL:0000825,2.44e-24,3;CL:0000624,3.25e-21,6;CL:0000791,8.57e-21,18;CL:0000789,8.57e-21,18;CL:0002420,8.57e-21,18;CL:0002419,8.57e-21,18;CL:0000790,8.57e-21,18;CL:0000838,1.61e-19,52;CL:0000542,4.11e-19,53;CL:0000051,4.11e-19,53;CL:0000738,4.73e-19,136;CL:0002087,3.59e-16,115;CL:0000037,9.23e-15,168;CL:0000084,9.38e-15,25;CL:0000827,9.38e-15,25;CL:0000988,7.86e-14,177;CL:0002031,1.75e-13,120;CL:0000226,5.71e-11,3;CL:0000842,5.71e-11,3;CL:0002032,9.43e-11,161;CL:0000837,9.43e-11,161;CL:0000625,4.23e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;7.35e-21;18!CL:0000051;3.39e-10;53 | |||
|ontology_enrichment_disease=DOID:162!6.07e-11!235;DOID:14566!7.73e-11!239;DOID:0050687!1.13e-10!143;DOID:305!1.93e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0,0,0.0821005894499457,0.157421562627358,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0,0.697204805222715,0.426507697462265,0,0.553995408531877,1.60435557976113,1.95309783644267,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0,0,1.35426486594342,0.376484679085209,0.272906150057846,0,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0.422510572623884,0.637812899895131,0.419317291016752,0.44931452458598,0.600707571366025,0.16072558669708,0.285012743741249,0.79566670879636,0.365328307529268,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,1.17447437874188,1.14681968437569,0,0.560508562981536,0.526768169550154,3.34406609193516,4.32311839024081,2.2616164889946,0.167186495390678,0.32592226663359,0.473447805734733,1.94826728407911,0,1.17842362989935,0.443067789167242,0.270803863765016,0.128091319725675,0.260118695119756,0,0,0,0.741432815810302,0.802622484269139,0,0.226618685395132,0,0.68725489096526,0.253019692019503,0,0,0,0.301150238155546,0.255973222308837,0,0,0,3.83052812126992,5.88368430723716,2.17236605824198,0,0,0.12786256184353,0,0,0,0.795285947051099,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0.257640540045629,0,0.506328996723799,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.448340575974109,3.34952292343276,1.94064817373566,2.82354679815446,0,0,0,0.335032530668698,0.637938751653163,0.749007023947182,0,0.414415513436035,0.12269149171914,0,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,1.07857100409308,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0.247528499761764,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.290033387828457,0.340906509664404,0,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,1.68471475667626,0.443430153536676,0,0,0,0.569647187174163,0,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0.245040215981032,0.743212700502875,0.28853842595289,0.213425530045242,0.478278818186467,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0.586164286206121,0,0,0,0,0,0,0,0,0.111443384277478,0,0.47748896947538,0,0,0,0,0.333926115068718,0,0.211125408127993,0,0,0.251932747854276,0.306806047506464,0.369254416383208,0.622079175323615,0.629078458031288,0.537063524026827,0,0,0,0,0,0,0,0.260427761085233,0.349839999984783,0,0.227586896570999,0,0.236387681767936,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0.278847488557207,0,0.113942055847001,0,0.269272933229316,0,0.638002319463839,0,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0.476809736941136,0.210998064528027,0.816164040795739,0,0.216388639742091,0,0.176915129006678,0.611030144933625,0.296521128680622,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0.693373365065693,0.520679215005393,0,0.261177619741208,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,0.19871461170299,0,1.36885967914362,0,0,0,0.144090417154106,0.114536596165916,0.343189995723929,0.432164393964449,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0.202210631562555,0.295282444544246,0.0846733320657845,0,0,0.160753148465019,0.550157746388935,0.415440338029185,0.449947783103001,1.5476039091159,0.0607495566580247,0,0,0.0524545881349981,0,0.179287339332845,0.383830394638891,0,0.662091970365432,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0.124980407962107,0.303298235083296,0.570930667089935,0,0.468334905806882,0.434763085832475,0.149254802886874,0.233713309847224,0,0,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0.414706207840855,0,0.521745061811734,0.150257608997218,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0.686791410365586,0,0,0.385239660814607,0,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0.389720617678777,0,0,0,0,0,0.19998739585493,0.106691729694141,0.344429959321631,0,0.368211900503681,0,0,0.383683113910955,0.323474434190045,1.10086159299127,0.218419276384028,0,0.212574920101683,0.371807292777007,0,0,0.47317047000752,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0.346576998451015,0,0,0,0,0.60511520611056,0,0.261906694481422,0,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0.230467975111559,0.342976018874837,0,0,0.827356886187777,0.444925607568277,0,0,0,0,0.215927591218621,1.9110067515482,0,0,0,0,0.801711364730253,0,0,0,0,0.118332000730565,0.340853619036631,0,0.4582137370881,0,0.955538938977433,0,0.294450700845729,0.365753774946808,0,0,0,0,0,0.397901550322736,0.118920090777569,0.33883824611688,0,0.603851374266694,0,0.218559560503957,0,0,0.471353094203252,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0.599646935549574,0.357107877211315,0,0.481448200135009,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,0,0.126166424835079,0.109265571963696,0,0.203977659483963,0,0,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0.124149428591716,0.33639558774184,0.0636471582781649,0,0,0,0,0,0,0.325613074443898,0.426909383510862,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p8@SRSF2 | |||
}} |
Revision as of 17:31, 20 January 2014
Short description: | p8@SRSF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SRSF2_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -24bp_to_uc002jsw.1_5end |
EntrezGene: | SRSF2 |
HGNC: | 10783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.44e-24 | 3 |
pro-NK cell | 2.44e-24 | 3 |
CD4-positive, alpha-beta T cell | 3.25e-21 | 6 |
mature alpha-beta T cell | 8.57e-21 | 18 |
alpha-beta T cell | 8.57e-21 | 18 |
immature T cell | 8.57e-21 | 18 |
mature T cell | 8.57e-21 | 18 |
immature alpha-beta T cell | 8.57e-21 | 18 |
lymphoid lineage restricted progenitor cell | 1.61e-19 | 52 |
lymphocyte | 4.11e-19 | 53 |
common lymphoid progenitor | 4.11e-19 | 53 |
leukocyte | 4.73e-19 | 136 |
nongranular leukocyte | 3.59e-16 | 115 |
hematopoietic stem cell | 9.23e-15 | 168 |
T cell | 9.38e-15 | 25 |
pro-T cell | 9.38e-15 | 25 |
hematopoietic cell | 7.86e-14 | 177 |
hematopoietic lineage restricted progenitor cell | 1.75e-13 | 120 |
single nucleate cell | 5.71e-11 | 3 |
mononuclear cell | 5.71e-11 | 3 |
hematopoietic oligopotent progenitor cell | 9.43e-11 | 161 |
hematopoietic multipotent progenitor cell | 9.43e-11 | 161 |
CD8-positive, alpha-beta T cell | 4.23e-07 | 11 |