FFCP PHASE1:Hg19::chr17:73839792..73839918,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=201294 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23147 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-483bp_to_BC024740_5end | |||
|coexpression_cluster_id=C3675 | |||
|description=CAGE_peak_4_at_UNC13D_5end | |||
|id=chr17:73839792..73839918,- | |||
|ontology_enrichment_celltype=CL:0000037!2.56e-51!172;CL:0000566!2.56e-51!172;CL:0000988!2.32e-48!182;CL:0002032!1.21e-46!165;CL:0000837!1.21e-46!165;CL:0000738!1.40e-32!140;CL:0000838!2.09e-26!52;CL:0000542!2.40e-26!53;CL:0000051!2.40e-26!53;CL:0002031!1.01e-25!124;CL:0002087!1.46e-23!119;CL:0000763!1.51e-20!112;CL:0000049!1.51e-20!112;CL:0000084!2.89e-18!25;CL:0000827!2.89e-18!25;CL:0000791!2.34e-14!18;CL:0000789!2.34e-14!18;CL:0002420!2.34e-14!18;CL:0002419!2.34e-14!18;CL:0000790!2.34e-14!18;CL:0000625!1.07e-09!11;CL:0000945!3.54e-08!24;CL:0000826!3.54e-08!24;CL:0000766!9.93e-08!76;CL:0000236!1.26e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000084;9.02e-28;25!CL:0000791;1.46e-21;18!CL:0000789;1.46e-21;18!CL:0002419;1.46e-21;18!CL:0000542;1.17e-20;53!CL:0000625;2.78e-14;11!CL:0000236;4.32e-09;13!CL:0000945;4.95e-09;24!CL:0000988;7.09e-09;177!CL:0000094;2.23e-08;8!CL:0000097;7.40e-08;5!CL:0000624;1.13e-07;6!CL:0000081;6.56e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.58e-49,168;CL:0000988,2.93e-48,177;CL:0002032,4.78e-43,161;CL:0000837,4.78e-43,161;CL:0000838,1.19e-36,52;CL:0000542,1.20e-35,53;CL:0000051,1.20e-35,53;CL:0000084,9.71e-28,25;CL:0000827,9.71e-28,25;CL:0000738,1.18e-25,136;CL:0000791,1.33e-21,18;CL:0000789,1.33e-21,18;CL:0002420,1.33e-21,18;CL:0002419,1.33e-21,18;CL:0000790,1.33e-21,18;CL:0002031,6.54e-19,120;CL:0002087,2.65e-16,115;CL:0000625,2.67e-14,11;CL:0000763,3.68e-13,108;CL:0000049,3.68e-13,108;CL:0000236,7.96e-10,14;CL:0000945,3.88e-09,24;CL:0000826,3.88e-09,24;CL:0000134,4.06e-09,354;CL:0002320,1.83e-08,361;CL:0000094,2.01e-08,8;CL:0000097,7.32e-08,5;CL:0002028,7.32e-08,5;CL:0000624,1.06e-07,6;CL:0000081,6.05e-07,11;CL:0000219,6.60e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;1.46e-21;18!CL:0000051;1.17e-20;53 | |||
|ontology_enrichment_disease=DOID:1240!7.64e-21!39;DOID:2531!3.56e-19!51;DOID:0060083!3.56e-19!51;DOID:8692!9.41e-17!31;DOID:1036!7.47e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.53e-20;39!DOID:8692;3.68e-20;31!DOID:2531;4.15e-15;51!DOID:0060083;4.15e-15;51!DOID:1036;6.82e-10;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.55e-26,39;DOID:2531,2.62e-21,51;DOID:0060083,2.62e-21,51;DOID:8692,1.15e-20,31;DOID:1036,7.41e-10,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.94e-12!102;UBERON:0003061!8.94e-12!102;UBERON:0000178!3.79e-11!15;UBERON:0000179!3.79e-11!15;UBERON:0000463!3.79e-11!15;UBERON:0002193!4.39e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.91e-16;15!UBERON:0000179;1.91e-16;15!UBERON:0000463;1.91e-16;15!UBERON:0002390;1.50e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.44e-16,15;UBERON:0000179,1.44e-16,15;UBERON:0000463,1.44e-16,15;UBERON:0002384,1.36e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,5.6518805395347,36.9834619025387,1.09220686065086,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,1.52826811495903,1.31360943119913,1.33808328233255,9.4407426443737,6.52509976765262,4.33485145285013,0,0,0,0.619737604642413,0.142169232487422,16.1480241634166,4.9859586767869,3.81034450193269,4.12320654360118,0.895661896959697,2.59114932815184,0.77272670290256,0.436194716338694,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0.689491361473237,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0.290209238628584,0,0,0.75374599577023,0,0.217188844705117,0.605399502633369,0,0,0.633765858935825,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0.39783335439818,0.365328307529268,5.27988733383968,2.73069305631066,5.33705552318133,2.98711155796555,3.60356388332411,4.59801951963587,3.96626923670917,1.90810750907073,2.84606484554724,2.93618594685469,2.6759125968766,19.8256992868539,16.2547483264645,21.0707267820062,10.0321982758055,13.3623659334716,13.3640974349681,13.2077331358636,14.9924242651452,10.8892995318989,21.4309401248702,13.1464339124505,10.3112067616193,11.9628303075155,11.6445661418957,18.0608760813202,16.1273590974249,15.4571630327456,19.3445012450094,15.9391697154279,11.8629250529648,10.4340922954988,15.6803285707465,9.51798478659556,11.8798353016596,11.3397057009268,12.3979649089556,17.5210977878253,18.8814201618361,13.3063286222772,15.8103875031661,16.8942326723832,17.4903017173284,13.733080618553,13.1380479507367,16.7333596876528,16.0464117470104,20.1305921397091,0,0.670700859703636,0,0,0,0,0,0,0,0,0.175669571386252,0.327447688744282,0,0,0.97364218096405,2.61194605948901,2.79211717089617,7.3932093534656,9.15191857248205,8.54352253057999,0.79504962946682,0.860234595106124,1.38856200643038,1.69592382577203,3.77549492588915,1.37559020970034,1.67195973229448,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0.673588117878509,0.675668882899933,0,1.89853131913626,0.366403487860815,2.63560834872127,7.75560528296651,0,0,0,0,0,0,1.68203280042692,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.674338760312407,0.482022059766964,0.661763836394364,0.435758888184812,0.71181185733329,0.269662616320329,0.588664395376038,0.769494313892781,1.4763109092493,0,0,0,0,0,0,7.94633578946371,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.702012795417713,1.18904929830983,0,0,0,0,0,0,8.86793828212698,54.2378353521472,53.9053100406007,52.315543090357,55.4204282741808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,18.1577933269514,14.1862147345388,15.3095578150257,17.1979668614863,0,0,0,0,0,4.49404214368309,20.9413021442817,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37596867919507,7.33428282783297,11.9534864739858,0.606255142892519,0,1.5119514666484,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41185864310528,2.0914836081992,0.512900250232778,1.96808787419823,0.325378394664303,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.392996164052485,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0.689170200620878,24.8649328523763,18.351292971417,25.6341234228373,16.914456057503,14.3976795580168,18.1572527133961,18.3610688660959,20.621254583651,0,0,0,0.185803175125719,2.16403819464667,12.022971525882,11.3192653637464,21.1554133718786,7.66021480529467,16.0871922870151,3.24621940274555,9.26630687774414,0,14.2578705153451,12.5317238545034,3.89371088943688,1.4452926759333,1.81619736471943,0.425846237690326,2.06103206853459,0.307240764308458,0.671028323677248,0.667396566847634,4.10315000344285,10.5794346080192,4.92349595790849,32.9955927740699,14.6551665919041,40.8862314754764,0,0.293016358543788,0,2.22886768554957,0,0.95497793895076,0.593929361665277,1.22864280839693,0,0.281338832821026,0,2.63686198762815,0,0.796991953004279,2.76283915531148,0,0,2.95403533106567,0,3.59473404589307,0.179021174675609,3.06943422136123,0.591860433821602,11.974154617347,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.615602068030377,0.797594390929008,0,0,0,0.31900115973192,0.0915975934018623,0,14.3070617474031,4.08148666627064,34.5720298352325,14.2125266188824,11.3716269904289,13.2579053710916,9.10817917076088,55.7867392221129,1.26598838716816,0.163232808159148,0,0,1.99052386215701,1.06149077404007,1.83309043480088,1.48260564340311,1.48276726735803,1.8795950910982,0.134802265961354,0.802577647298789,0.468528891450678,0.547364367646998,0.19566461893209,0,0,0,0.30607276163049,0.63186579628488,0,0,0.664653872707185,0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| |||
|short_description=p4@UNC13D | |||
}} |
Revision as of 17:22, 20 January 2014
Short description: | p4@UNC13D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UNC13D_5end |
Coexpression cluster: | C3675_Mast_Whole_blood_acute_NK_Neutrophils_CD34 |
Association with transcript: | -483bp_to_BC024740_5end |
EntrezGene: | UNC13D |
HGNC: | 23147 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.58e-49 | 168 |
hematopoietic cell | 2.93e-48 | 177 |
hematopoietic oligopotent progenitor cell | 4.78e-43 | 161 |
hematopoietic multipotent progenitor cell | 4.78e-43 | 161 |
lymphoid lineage restricted progenitor cell | 1.19e-36 | 52 |
lymphocyte | 1.20e-35 | 53 |
common lymphoid progenitor | 1.20e-35 | 53 |
T cell | 9.71e-28 | 25 |
pro-T cell | 9.71e-28 | 25 |
leukocyte | 1.18e-25 | 136 |
mature alpha-beta T cell | 1.33e-21 | 18 |
alpha-beta T cell | 1.33e-21 | 18 |
immature T cell | 1.33e-21 | 18 |
mature T cell | 1.33e-21 | 18 |
immature alpha-beta T cell | 1.33e-21 | 18 |
hematopoietic lineage restricted progenitor cell | 6.54e-19 | 120 |
nongranular leukocyte | 2.65e-16 | 115 |
CD8-positive, alpha-beta T cell | 2.67e-14 | 11 |
myeloid cell | 3.68e-13 | 108 |
common myeloid progenitor | 3.68e-13 | 108 |
B cell | 7.96e-10 | 14 |
lymphocyte of B lineage | 3.88e-09 | 24 |
pro-B cell | 3.88e-09 | 24 |
mesenchymal cell | 4.06e-09 | 354 |
connective tissue cell | 1.83e-08 | 361 |
granulocyte | 2.01e-08 | 8 |
mast cell | 7.32e-08 | 5 |
basophil mast progenitor cell | 7.32e-08 | 5 |
CD4-positive, alpha-beta T cell | 1.06e-07 | 6 |
blood cell | 6.05e-07 | 11 |
motile cell | 6.60e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
blood | 1.44e-16 | 15 |
haemolymphatic fluid | 1.44e-16 | 15 |
organism substance | 1.44e-16 | 15 |
connective tissue | 1.36e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.55e-26 | 39 |
hematologic cancer | 2.62e-21 | 51 |
immune system cancer | 2.62e-21 | 51 |
myeloid leukemia | 1.15e-20 | 31 |
chronic leukemia | 7.41e-10 | 8 |