FFCP PHASE1:Hg19::chr17:56494980..56494991,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18505 | |||
|TSSclassifier=strong | |||
|UniProt=Q68DV7 | |||
|association_with_transcript=-49bp_to_NM_017763,uc002iwg.3,uc002iwh.3,uc010dcw.2_5end | |||
|description=CAGE_peak_5_at_RNF43_5end | |||
|id=chr17:56494980..56494991,- | |||
|ontology_enrichment_celltype=CL:0000223!2.42e-08!59;CL:0002076!1.40e-07!43;CL:0002251!3.02e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002253;3.44e-15;2!CL:0002603;1.96e-10;3!CL:0000182;4.55e-10;12!CL:0002563;4.87e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.24e-15,2;CL:0002603,1.48e-10,3;CL:0000182,3.82e-10,12;CL:0000223,1.18e-08,58;CL:0002563,3.94e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.67e-11;11!UBERON:0006215;9.07e-11;3!UBERON:0009497;2.65e-09;13!UBERON:0001041;2.37e-08;30!UBERON:0003104;5.11e-08;31 | |||
|ontology_enrichment_disease=DOID:305!5.70e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.54e-12;14!DOID:0050619;1.90e-08;1!DOID:1357;1.90e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.29e-12,14;DOID:0050619,8.78e-09,1;DOID:1357,8.78e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.82e-20!115;UBERON:0001049!4.89e-19!57;UBERON:0005068!4.89e-19!57;UBERON:0006241!4.89e-19!57;UBERON:0007135!4.89e-19!57;UBERON:0002616!1.00e-16!59;UBERON:0000153!3.89e-16!129;UBERON:0007811!3.89e-16!129;UBERON:0000033!1.60e-15!123;UBERON:0003075!8.21e-15!86;UBERON:0007284!8.21e-15!86;UBERON:0002346!2.15e-14!90;UBERON:0002780!5.74e-14!41;UBERON:0001890!5.74e-14!41;UBERON:0006240!5.74e-14!41;UBERON:0003080!1.95e-13!42;UBERON:0001017!2.17e-13!82;UBERON:0000955!2.75e-13!69;UBERON:0006238!2.75e-13!69;UBERON:0005743!5.65e-13!86;UBERON:0001950!1.47e-11!20;UBERON:0002619!1.54e-11!22;UBERON:0001869!1.74e-11!32;UBERON:0001893!2.19e-11!34;UBERON:0004121!2.46e-11!169;UBERON:0000924!3.14e-11!173;UBERON:0006601!3.14e-11!173;UBERON:0002791!1.32e-10!33;UBERON:0000073!1.37e-10!94;UBERON:0001016!1.37e-10!94;UBERON:0003056!1.59e-10!61;UBERON:0000956!1.35e-09!25;UBERON:0000203!1.35e-09!25;UBERON:0002020!3.06e-09!34;UBERON:0003528!3.06e-09!34;UBERON:0004111!5.57e-09!241;UBERON:0000481!2.70e-08!347;UBERON:0000064!8.47e-08!219;UBERON:0000200!9.61e-08!6;UBERON:0004733!1.46e-07!12;UBERON:0002028!1.46e-07!12;UBERON:0007277!1.46e-07!12;UBERON:0003076!6.10e-07!15;UBERON:0003057!6.10e-07!15;UBERON:0004732!8.51e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.76e-19;6!UBERON:0002680;4.67e-13;9!UBERON:0001895;4.67e-13;9!UBERON:0004733;7.87e-10;12!UBERON:0002028;7.87e-10;12!UBERON:0003929;1.06e-09;7!UBERON:0004732;4.39e-09;13!UBERON:0003350;1.50e-08;8!UBERON:0001000;1.90e-08;1!UBERON:0001764;1.90e-08;1!UBERON:0004913;1.90e-08;1!UBERON:0003703;1.90e-08;1!UBERON:0001825;1.90e-08;1!UBERON:0005352;1.90e-08;1!UBERON:0001174;1.90e-08;1!UBERON:0004914;1.90e-08;1!UBERON:0001052;4.87e-08;4!UBERON:0001242;4.87e-08;4!UBERON:0001262;4.87e-08;4!UBERON:0004786;4.87e-08;4!UBERON:0004808;4.87e-08;4!UBERON:0001277;4.87e-08;4!UBERON:0002423;3.66e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.86e-19,6;UBERON:0006215,1.86e-19,6;UBERON:0002680,4.84e-13,9;UBERON:0001895,4.84e-13,9;UBERON:0010092,4.84e-13,9;UBERON:0004733,8.08e-10,12;UBERON:0002028,8.08e-10,12;UBERON:0007277,8.08e-10,12;UBERON:0003929,1.86e-09,54;UBERON:0004732,4.50e-09,13;UBERON:0005911,8.65e-09,82;UBERON:0001764,8.78e-09,1;UBERON:0001825,8.78e-09,1;UBERON:0001000,1.27e-08,1;UBERON:0005352,1.27e-08,1;UBERON:0003350,1.31e-08,8;UBERON:0004913,1.48e-08,1;UBERON:0003703,1.48e-08,1;UBERON:0001174,1.48e-08,1;UBERON:0004914,1.48e-08,1;UBERON:0008835,3.03e-08,22;UBERON:0003894,3.03e-08,22;UBERON:0001052,3.94e-08,4;UBERON:0001242,3.94e-08,4;UBERON:0001262,3.94e-08,4;UBERON:0004786,3.94e-08,4;UBERON:0004808,3.94e-08,4;UBERON:0001277,3.94e-08,4;UBERON:0003076,7.05e-08,15;UBERON:0003057,7.05e-08,15;UBERON:0009854,7.08e-08,23;UBERON:0011216,8.86e-08,223;UBERON:0007499,3.16e-07,25;UBERON:0009497,3.16e-07,25;UBERON:0000015,3.16e-07,25;UBERON:0002423,3.16e-07,25;UBERON:0006235,3.16e-07,25;UBERON:0004161,3.16e-07,25;UBERON:0009856,6.13e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,1.84681587115182,0.816002764977012,1.25381888591235,0,0,0,0.916960868975415,0.57470412614962,0.865818594450472,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36373060295417,0.286804595389004,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.329250856225877,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0.503946384596579,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.893288987462089,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.557216921387392,0.284136146806413,0.23874448473769,0.296964680832639,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0,0.552567831062295,0.755798243562828,0,1.10776324914963,0,0,0.179021174675609,0,0,0,0,0,0.371072392647405,0,0,0.0874599999961957,0,0.227586896570999,0.254253650292766,0,0,0.291604613383254,0,0,0.120596438625408,0,4.31259113731776,1.18219047581419,0,0,0,0.153900517007594,0,0,0.0897576444097721,0.108647371922008,0,0,0,2.04386596391473,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0,1.41353071433941,1.51472047819464,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,1.57833761139756,0,0,0.063186579628488,0.751617097072463,0.103688191397247,0,0,0,0,0,0,0,0,0.261177619741208,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0.633107959558787,0,0.0801588202515337,0,0,0.288180834308212,1.25990255782507,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0.558564802544508,0.229160424011684,0,0,1.28767814440971,0,0.806201669840715,0,2.32991899054908,2.36349546921671,1.64831716762333,3.63979136812598,0.196854963029498,0.846733320657845,0,0.272406812223151,0,0.412618309791701,0.415440338029185,0,0,0.303747783290123,0,0.157611414598396,0.734364233889974,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,1.72924735609633,0,0,0,0.60896299190448,0,0,0,0,0,1.88464915500281,0.886068179966986,0.610131324509816,0.3755727921195,0.573409195690071,0.554645257684261,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0.478901577171454,0.41023272848151,0,0.207471757392654,0.161475645631851,0,0.490738592505128,0.353909170043221,0,0.462102664601353,0,0,0,0.150420656698515,0,0,0,0,1.47856086217045,0.540300676947157,0,0.620060389503552,0.317079050969534,0,0,0,0,0.255524855279191,0,0.336283722218824,0.606965604236632,1.13831095675649,0.0887023701626388,0.115233987555779,0,0.135939465953663,0.394636641377094,0.118193840883968,0,0.235479278551542,0.157115589916002,0.840816489941367,0,0,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0.691259661814092,0.430227358820278,0,0,0.846774100381858,0.22910686854405,0,0,0.111855431797792,0.883352102537187,1.70685094975177,0,0,0,0.485710993059139,0,1.39265542612958,0.237840181555137,4.63078936359736,0,0,0.463044948647668,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0.458729283404541,0,0.157771562193185,0.543931921527318,0,0,0,0,0,0,0.109265571963696,0,0.305966489225945,0.26721740526556,0.18378979906969,0,0.151557396436479,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.31037357147929,0,0,0,0,0.342233301085281,0.202056159043763,0.215166616178029,0,0.244209805832924,0,0,0.179650404213174,0,0.366724332548599,0.406896178315738,0,0,0 | |||
|short_description=p5@RNF43 | |||
}} |
Revision as of 16:32, 20 January 2014
Short description: | p5@RNF43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RNF43_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_NM_017763, uc002iwg.3, uc002iwh.3, uc010dcw.2_5end |
EntrezGene: | RNF43 |
HGNC: | 18505 |
UniProt: | Q68DV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.24e-15 | 2 |
astrocyte of the cerebellum | 1.48e-10 | 3 |
hepatocyte | 3.82e-10 | 12 |
endodermal cell | 1.18e-08 | 58 |
intestinal epithelial cell | 3.94e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.29e-12 | 14 |
paranasal sinus cancer | 8.78e-09 | 1 |
maxillary sinus cancer | 8.78e-09 | 1 |