FFCP PHASE1:Hg19::chr17:46670939..46670958,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=85bp_to_AB464575_5end | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_5_at_AB464575_5end | |||
|id=chr17:46670939..46670958,- | |||
|ontology_enrichment_celltype=CL:0002334!1.38e-07!12;CL:1000507!2.57e-07!12;CL:1000494!2.57e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002598;5.15e-12;2!CL:0002262;1.58e-11;2!CL:1000398;1.58e-11;2!CL:0002554;2.96e-11;2!CL:0002575;2.96e-11;2!CL:0002553;5.57e-07;1!CL:0000167;6.95e-07;1!CL:0000164;6.95e-07;1!CL:0000502;6.95e-07;1!CL:0000172;6.95e-07;1!CL:0000173;6.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002598,4.89e-12,2;CL:0002262,1.67e-11,2;CL:1000398,1.67e-11,2;CL:0002554,2.28e-11,2;CL:0002575,4.72e-11,2;CL:0002553,5.58e-07,1;CL:0000167,6.96e-07,1;CL:0000164,6.96e-07,1;CL:0000502,6.96e-07,1;CL:0000172,6.96e-07,1;CL:0000173,6.96e-07,1;CL:0002351,6.96e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.21e-16;3!UBERON:0003057;7.21e-16;3!CL:0002351;6.95e-07;1!UBERON:0005754;9.92e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;6.95e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,6.96e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005177!2.54e-09!107;UBERON:0002100!5.38e-09!216;UBERON:0000489!7.02e-09!32;UBERON:0009569!8.00e-09!113;UBERON:0000080!1.94e-08!18;UBERON:0002120!1.94e-08!18;UBERON:0004875!1.94e-08!18;UBERON:0005721!1.94e-08!18;UBERON:0005754!1.94e-08!18;UBERON:0007297!1.94e-08!18;UBERON:0000353!7.33e-08!17;UBERON:0004876!2.46e-07!20;UBERON:0009773!2.57e-07!12;UBERON:0001231!2.57e-07!12;UBERON:0004810!2.57e-07!12;UBERON:0006555!2.99e-07!17;UBERON:0005103!2.99e-07!17;UBERON:0000083!2.99e-07!17;UBERON:0009201!2.99e-07!17;UBERON:0004819!2.99e-07!17;UBERON:0006553!2.99e-07!17;UBERON:0003074!2.99e-07!17;UBERON:0003060!2.99e-07!17;UBERON:0003076!3.06e-07!15;UBERON:0003057!3.06e-07!15;UBERON:0005178!3.17e-07!34;UBERON:0002224!3.17e-07!34;UBERON:0005181!6.53e-07!35;UBERON:0003887!7.26e-07!21;UBERON:0002113!8.25e-07!27;UBERON:0003918!8.25e-07!27;UBERON:0005095!8.25e-07!27;UBERON:0007687!8.25e-07!27;UBERON:0000464!9.25e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;7.21e-16;3!UBERON:0005174;7.21e-16;3!UBERON:0001137;7.21e-16;3!UBERON:0001281;1.58e-11;2!UBERON:0003497;1.58e-11;2!UBERON:0003909;1.58e-11;2!UBERON:0003835;1.58e-11;2!UBERON:0001280;5.79e-08;3!UBERON:0004647;5.79e-08;3!UBERON:0006947;7.25e-08;3!UBERON:0004054;7.25e-08;3!UBERON:0000998;9.92e-07;1!UBERON:0006868;9.92e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,6.53e-16,3;UBERON:0005174,6.53e-16,3;UBERON:0001137,6.53e-16,3;UBERON:0001281,1.67e-11,2;UBERON:0003497,1.67e-11,2;UBERON:0003909,1.67e-11,2;UBERON:0003835,1.67e-11,2;UBERON:0006947,5.22e-08,3;UBERON:0004054,5.22e-08,3;UBERON:0001280,6.00e-08,3;UBERON:0004647,6.00e-08,3;UBERON:0005171,6.00e-08,3;UBERON:0005178,7.07e-07,34;UBERON:0002224,7.07e-07,34;UBERON:0000998,9.67e-07,1;UBERON:0006868,9.67e-07,1 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0,0,0,0,3.19454117451962,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.408001382488506,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469737994575059,1.13311061057692,0.98315564691574,0,0,0,0,0,1.82032272387605,2.15585442544872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,5.16708818237254,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,2.00068208423871,0,0,0,0,0,0,0,0,0,0,0,2.54541504701563,1.02943027143257,0,0,0,0,0,0,0,0,0.280660094433074,0.640695746278505,0,0.804269605718038,0,1.07946785661859,0.355123450626254,0.821271560138091,3.11552657510173,0.697262270759755,0,0,0,0,0,0,0.902399225814824,0.15403067420883,0,0,0.105551628892876,0,0.510281115829547,0.215915916102139,0,0,0.501689773854853,1.78413391131527,0,0.895499018888713,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,1.85938219718914,1.25924938732256,0.6970372701606,0,0,0.869932992075073,0,0,0,0.316379424718726,0.38126038784765,6.14154699147201,3.85145089230528,0,0,0,0.54907405947211,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,2.89387767133344,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,1.22206028986725,0.296521128680622,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0.284609546029793,0.970722711091971,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,1.83258553865465,6.17741992303072,0,0,0,0.407712618220842,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.262272940674991,0.211200673038813,0,0,0,0,0,0,0,0,0,0.492555124496034,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,1.72924735609633,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.221858103073705,4.16045899707269,0,0,0,0,0,0,0.724605143054126,0,0,1.10961172300523,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0.797525143673985,1.04349012362347,0,0.380805212168795,0.813741466409323,0,0,0,0,2.00013882331577,0.343395705182793,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.227966665988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0.611727596791485,0,0,0,0.078493092850514,0,0,4.56579360254748,0,0,0,0,2.90603563420313,0,0,0,0,0,0,0,0,3.38709640152743,0,0.93061915699296,0.955538938977433,0,0.098150233615243,0,0,0,0,0,5.84848658655264,0.596852325484105,0.237840181555137,0,0,4.22695961986686,0.540219106755613,0.655678681511872,1.41095188908457,0,5.18488403623577,2.74831853960923,1.48523200163543,1.2679671827502,0,0,0,0,0,0,0,0,0,0,1.41994405973866,0,0,0,0.371995018166751,0,0,0,0,0.253397002022874,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p5@AB464575 | |||
}} |
Revision as of 16:00, 20 January 2014
Short description: | p5@AB464575 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AB464575_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | 85bp_to_AB464575_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial smooth muscle cell | 4.89e-12 | 2 |
endothelial cell of sinusoid | 1.67e-11 | 2 |
endothelial cell of hepatic sinusoid | 1.67e-11 | 2 |
fibroblast of lymphatic vessel | 2.28e-11 | 2 |
central nervous system pericyte | 4.72e-11 | 2 |
lung fibroblast | 5.58e-07 | 1 |
peptide hormone secreting cell | 6.96e-07 | 1 |
enteroendocrine cell | 6.96e-07 | 1 |
type D enteroendocrine cell | 6.96e-07 | 1 |
somatostatin secreting cell | 6.96e-07 | 1 |
pancreatic D cell | 6.96e-07 | 1 |
progenitor cell of endocrine pancreas | 6.96e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 6.53e-16 | 3 |
dorsal region element | 6.53e-16 | 3 |
dorsum | 6.53e-16 | 3 |
hepatic sinusoid | 1.67e-11 | 2 |
abdomen blood vessel | 1.67e-11 | 2 |
sinusoid | 1.67e-11 | 2 |
abdominal segment blood vessel | 1.67e-11 | 2 |
male genital duct | 5.22e-08 | 3 |
internal male genitalia | 5.22e-08 | 3 |
liver parenchyma | 6.00e-08 | 3 |
liver lobule | 6.00e-08 | 3 |
hepatic duct | 6.00e-08 | 3 |
thoracic cavity element | 7.07e-07 | 34 |
thoracic cavity | 7.07e-07 | 34 |
seminal vesicle | 9.67e-07 | 1 |
seminal fluid secreting gland | 9.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.96e-07 | 1 |