FFCP PHASE1:Hg19::chr17:42147547..42147551,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:42147547..42147551,- | |||
|id=chr17:42147547..42147551,- | |||
|ontology_enrichment_celltype=CL:0000066!5.91e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.17e-15;5!CL:0001014;2.37e-10;2!CL:0001016;2.37e-10;2!CL:0002202;5.63e-09;9!CL:0002632;5.63e-09;9!CL:0000322;2.55e-07;3!CL:0000307;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.89e-10,2;CL:0001016,1.89e-10,2;CL:0002202,4.80e-09,9;CL:0002632,4.80e-09,9;CL:0000322,1.93e-07,3;CL:0000068,2.63e-07,3;CL:0000069,2.63e-07,3;CL:0000307,2.63e-07,3;CL:0000377,2.63e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.55e-07;3 | |||
|ontology_enrichment_disease=DOID:162!1.11e-34!235;DOID:14566!2.14e-34!239;DOID:0050687!1.81e-31!143;DOID:305!1.65e-24!106;DOID:0050686!1.32e-13!137;DOID:3095!2.49e-09!22;DOID:2994!2.49e-09!22;DOID:299!6.30e-08!25;DOID:3119!2.64e-07!14;DOID:171!2.64e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:169;5.42e-13;6!DOID:4074;2.37e-10;2!DOID:4905;2.37e-10;2!DOID:1909;2.37e-10;2!DOID:3910;2.37e-10;2!DOID:3498;2.37e-10;2!DOID:1036;4.31e-10;8!DOID:171;3.62e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.90e-13,6;DOID:3910,1.57e-10,2;DOID:4074,1.72e-10,2;DOID:4905,1.72e-10,2;DOID:3498,1.72e-10,2;DOID:1909,3.27e-10,2;DOID:1036,4.62e-10,8;DOID:171,4.19e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.17e-15;5!UBERON:0002410;2.17e-15;5!UBERON:0004903;2.37e-10;2!UBERON:0002173;2.37e-10;2!UBERON:0002186;2.37e-10;2!UBERON:0000010;5.63e-09;8!UBERON:0004821;2.55e-07;3!UBERON:0007499;2.55e-07;3!UBERON:0003215;2.55e-07;3!UBERON:0010368;2.55e-07;3!UBERON:0009911;2.55e-07;3!UBERON:0002299;2.55e-07;3!UBERON:0006524;2.55e-07;3!UBERON:0008874;2.55e-07;3!UBERON:0002169;2.55e-07;3!UBERON:0004894;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.90e-15,5;UBERON:0002410,2.90e-15,5;UBERON:0004903,1.57e-10,2;UBERON:0002173,1.57e-10,2;UBERON:0002186,1.57e-10,2;UBERON:0000010,6.61e-09,8;UBERON:0004821,1.93e-07,3;UBERON:0003215,1.93e-07,3;UBERON:0010368,1.93e-07,3;UBERON:0009911,1.93e-07,3;UBERON:0002299,1.93e-07,3;UBERON:0006524,1.93e-07,3;UBERON:0008874,1.93e-07,3;UBERON:0002169,1.93e-07,3;UBERON:0004894,1.93e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447792613514241,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0.28853842595289,0.0711418433484141,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,1.70481688083848,0,0,0,0,0,0,0,0.63337622438398,0,0,0.503865495708552,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0.260427761085233,0.524759999977174,0,1.4793148277115,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0.980446171670911,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0.19606253431774,0,4.17458211993207,0.317873157960757,0.421996129056054,0.163232808159148,0.848118428603645,0.216388639742091,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0.19566461893209,1.69946265673865,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0,0,0,0.783532859223623,0,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0,0,0.411125773940253,0,0,0,0,0,0.19980960958213,0,0.458146384663663,0.171594997861965,0.720273989940749,0.124252535565433,0.942776138467182,0.135904206073614,0.104602846312333,0.713987523454252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0,0.137539436597234,0,0,1.5476039091159,0,0,0,0,0,0.35857467866569,0,0,0,0.25426853765475,0,0,0,0,1.31348033198942,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24513771442608,0.624902039810533,1.21319294033318,0,0,0.468334905806882,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0.813741466409323,0.181848659202559,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.633936370075881,0.19998739585493,0.106691729694141,0,0,0.184105950251841,0,0,1.15104934173287,0.215649622793364,1.41539347670307,0.436838552768056,0.33946505990805,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.366857197043358,0,0,0,0.198916222116275,0,0,0,0,0.655087670040387,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.460935950223117,0,0,0,0.590969204419841,0.222462803784138,0,0.157115589916002,0,0,0,0,0,0.158013611732727,0.813689977576877,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0.365753774946808,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0.439762066981716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.252332849670158,0.546327859818478,0,0.101988829741982,0.534434810531121,0,0.250707539292375,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0.106727345877715,0,0.538951212639521,0,0,0,0,0,0 | |||
|short_description=p@chr17:42147547..42147551,- | |||
}} |
Revision as of 15:37, 20 January 2014
Short description: | p@chr17:42147547..42147551, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:42147547..42147551, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.89e-10 | 2 |
immature CD1a-positive Langerhans cell | 1.89e-10 | 2 |
epithelial cell of tracheobronchial tree | 4.80e-09 | 9 |
epithelial cell of lower respiratory tract | 4.80e-09 | 9 |
pneumocyte | 1.93e-07 | 3 |
duct epithelial cell | 2.63e-07 | 3 |
branched duct epithelial cell | 2.63e-07 | 3 |
tracheal epithelial cell | 2.63e-07 | 3 |
tracheoblast | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.90e-15 | 5 |
autonomic nervous system | 2.90e-15 | 5 |
bronchoalveolar duct junction | 1.57e-10 | 2 |
alveolar duct | 1.57e-10 | 2 |
bronchiole | 1.57e-10 | 2 |
peripheral nervous system | 6.61e-09 | 8 |
pulmonary alveolus epithelium | 1.93e-07 | 3 |
alveolus | 1.93e-07 | 3 |
pulmonary lobule | 1.93e-07 | 3 |
lobule | 1.93e-07 | 3 |
alveolus of lung | 1.93e-07 | 3 |
alveolar system | 1.93e-07 | 3 |
pulmonary acinus | 1.93e-07 | 3 |
alveolar sac | 1.93e-07 | 3 |
alveolar wall | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.90e-13 | 6 |
lung adenocarcinoma | 1.57e-10 | 2 |
pancreas adenocarcinoma | 1.72e-10 | 2 |
pancreatic carcinoma | 1.72e-10 | 2 |
pancreatic ductal adenocarcinoma | 1.72e-10 | 2 |
melanoma | 3.27e-10 | 2 |
chronic leukemia | 4.62e-10 | 8 |
neuroectodermal tumor | 4.19e-08 | 10 |