FFCP PHASE1:Hg19::chr17:39968182..39968244,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10609 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16946 | |||
|TSSclassifier=strong | |||
|UniProt=B4DVZ5 | |||
|association_with_transcript=-15bp_to_ENST00000545545_5end | |||
|coexpression_cluster_id=C750 | |||
|description=CAGE_peak_1_at_LEPREL4_5end | |||
|id=chr17:39968182..39968244,- | |||
|ontology_enrichment_celltype=CL:0000055!1.49e-38!180;CL:0000222!3.26e-24!119;CL:0000220!2.95e-22!246;CL:0002321!4.47e-22!248;CL:0000183!3.59e-20!59;CL:0000680!3.03e-18!57;CL:0000056!3.03e-18!57;CL:0000355!3.03e-18!57;CL:0000187!9.87e-18!54;CL:0000057!4.38e-17!75;CL:0000192!6.05e-17!42;CL:0000514!6.05e-17!42;CL:0000548!2.08e-15!679;CL:0000004!2.08e-15!679;CL:0000255!2.08e-15!679;CL:0000393!2.19e-15!60;CL:0000211!2.19e-15!60;CL:0000012!1.44e-14!682;CL:0000359!3.23e-14!32;CL:0000144!1.38e-11!625;CL:0002371!3.31e-10!591;CL:0000066!4.78e-09!254;CL:0002494!4.03e-07!16;CL:0000003!4.88e-07!722;CL:0000213!5.98e-07!57;CL:0000215!5.98e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.22e-13;32!CL:0000192;5.30e-12;43!CL:0000187;5.91e-10;55!CL:0000134;7.48e-09;55!CL:0000048;3.33e-08;58!CL:0000723;4.31e-08;61!CL:0000393;4.82e-08;61!CL:0000211;4.82e-08;61!CL:0000349;1.12e-07;19!CL:0002494;3.70e-07;16!CL:0000057;4.02e-07;73!CL:0002320;6.36e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.48e-24,121;CL:0002321,2.35e-22,250;CL:0000680,4.62e-18,58;CL:0000056,4.62e-18,58;CL:0000355,4.62e-18,58;CL:0000057,1.12e-17,76;CL:0000187,1.53e-17,55;CL:0000192,1.08e-16,43;CL:0000514,1.08e-16,43;CL:0000393,2.99e-15,61;CL:0000211,2.99e-15,61;CL:0000359,3.07e-14,32;CL:0000066,4.54e-09,253;CL:0000349,1.07e-07,19;CL:0002494,3.94e-07,16;CL:0000213,4.10e-07,58;CL:0000215,4.10e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;5.30e-12;43!CL:0000355;6.96e-10;58!CL:0000222;5.87e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.42e-21!79;UBERON:0007798!1.42e-21!79;UBERON:0003914!9.01e-21!118;UBERON:0005256!5.93e-19!143;UBERON:0002100!6.05e-19!216;UBERON:0004872!1.12e-18!84;UBERON:0000490!1.39e-18!138;UBERON:0003104!5.01e-17!238;UBERON:0009142!5.01e-17!238;UBERON:0000914!5.63e-17!83;UBERON:0002329!5.63e-17!83;UBERON:0003077!5.63e-17!83;UBERON:0003059!5.63e-17!83;UBERON:0007282!5.63e-17!83;UBERON:0009618!5.63e-17!83;UBERON:0007285!5.63e-17!83;UBERON:0004290!8.11e-17!70;UBERON:0001134!1.13e-16!61;UBERON:0002036!1.13e-16!61;UBERON:0003082!1.13e-16!61;UBERON:0000055!1.56e-16!69;UBERON:0001981!2.62e-16!60;UBERON:0007500!2.62e-16!60;UBERON:0004537!2.62e-16!60;UBERON:0006965!2.62e-16!60;UBERON:0000486!4.59e-16!82;UBERON:0001637!5.27e-16!42;UBERON:0003509!5.27e-16!42;UBERON:0004572!5.27e-16!42;UBERON:0002385!8.13e-16!63;UBERON:0001015!8.13e-16!63;UBERON:0000383!8.13e-16!63;UBERON:0000475!1.12e-15!365;UBERON:0000481!2.25e-15!347;UBERON:0004535!1.10e-14!110;UBERON:0000119!6.92e-14!312;UBERON:0001009!7.33e-14!113;UBERON:0000483!2.03e-13!309;UBERON:0004573!1.66e-12!33;UBERON:0004571!1.66e-12!33;UBERON:0000477!1.03e-11!286;UBERON:0000468!6.50e-10!659;UBERON:0009569!2.29e-08!113;UBERON:0004111!6.64e-08!241;UBERON:0000467!3.35e-07!625;UBERON:0000025!3.43e-07!194;UBERON:0000480!5.93e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.37e-12;42!UBERON:0003509;6.37e-12;42!UBERON:0004572;6.37e-12;42!UBERON:0004573;2.31e-11;33!UBERON:0004571;2.31e-11;33!UBERON:0003914;6.24e-10;74!UBERON:0007500;1.10e-09;56!UBERON:0001981;1.10e-09;56!UBERON:0004537;1.10e-09;56!UBERON:0002049;2.94e-09;75!UBERON:0007798;2.94e-09;75!UBERON:0000055;1.06e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.23e-21,78;UBERON:0007798,5.23e-21,78;UBERON:0003914,5.66e-21,117;UBERON:0003104,6.75e-21,160;UBERON:0009142,6.75e-21,160;UBERON:0007503,1.16e-19,78;UBERON:0000490,3.15e-19,148;UBERON:0002100,1.07e-18,199;UBERON:0004872,4.29e-18,83;UBERON:0007524,9.64e-17,73;UBERON:0002329,1.07e-16,71;UBERON:0003059,1.07e-16,71;UBERON:0007282,1.07e-16,71;UBERON:0004290,1.07e-16,71;UBERON:0009618,1.07e-16,71;UBERON:0001134,1.59e-16,62;UBERON:0002036,1.59e-16,62;UBERON:0003082,1.59e-16,62;UBERON:0005256,2.36e-16,122;UBERON:0003077,2.86e-16,72;UBERON:0007285,2.86e-16,72;UBERON:0000055,4.91e-16,68;UBERON:0001637,4.97e-16,42;UBERON:0003509,4.97e-16,42;UBERON:0004572,4.97e-16,42;UBERON:0000486,5.61e-16,83;UBERON:0007500,9.41e-16,59;UBERON:0001981,9.41e-16,59;UBERON:0004537,9.41e-16,59;UBERON:0006965,9.41e-16,59;UBERON:0002385,1.10e-15,64;UBERON:0001015,1.10e-15,64;UBERON:0000383,1.10e-15,64;UBERON:0000119,1.41e-14,309;UBERON:0000483,4.25e-14,306;UBERON:0004535,4.47e-14,109;UBERON:0001009,2.85e-13,112;UBERON:0004573,1.59e-12,33;UBERON:0004571,1.59e-12,33;UBERON:0009569,2.46e-08,112;UBERON:0004111,2.91e-08,240;UBERON:0000025,2.74e-07,192;UBERON:0006554,8.72e-07,47 | |||
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| |||
|short_description=p1@LEPREL4 | |||
}} |
Revision as of 15:21, 20 January 2014
Short description: | p1@LEPREL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LEPREL4_5end |
Coexpression cluster: | C750_Smooth_Mesenchymal_Fibroblast_Hepatic_Chondrocyte_Lens_tenocyte |
Association with transcript: | -15bp_to_ENST00000545545_5end |
EntrezGene: | LEPREL4 |
HGNC: | 16946 |
UniProt: | B4DVZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.48e-24 | 121 |
embryonic cell | 2.35e-22 | 250 |
muscle precursor cell | 4.62e-18 | 58 |
myoblast | 4.62e-18 | 58 |
multi-potent skeletal muscle stem cell | 4.62e-18 | 58 |
fibroblast | 1.12e-17 | 76 |
muscle cell | 1.53e-17 | 55 |
smooth muscle cell | 1.08e-16 | 43 |
smooth muscle myoblast | 1.08e-16 | 43 |
electrically responsive cell | 2.99e-15 | 61 |
electrically active cell | 2.99e-15 | 61 |
vascular associated smooth muscle cell | 3.07e-14 | 32 |
epithelial cell | 4.54e-09 | 253 |
extraembryonic cell | 1.07e-07 | 19 |
cardiocyte | 3.94e-07 | 16 |
lining cell | 4.10e-07 | 58 |
barrier cell | 4.10e-07 | 58 |