FFCP PHASE1:Hg19::chr17:39659057..39659078,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3860 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6415 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-45bp_to_ENST00000464634_5end | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_3_at_KRT13_5end | |||
|id=chr17:39659057..39659078,- | |||
|ontology_enrichment_celltype=CL:0000244!2.71e-09!4;CL:0000731!2.71e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.39e-11;1!CL:0002625;1.39e-11;1!CL:0000216;1.39e-11;1!CL:0000244;3.41e-11;4!CL:0000731;3.41e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.19e-11,1;CL:0002625,1.19e-11,1;CL:0000216,1.19e-11,1;CL:0000244,2.92e-11,4;CL:0000731,2.92e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.93e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!5.32e-17!8;UBERON:0003135!1.87e-16!11;UBERON:0003101!1.57e-12!22;UBERON:0000079!1.57e-12!22;UBERON:0005156!1.12e-09!59;UBERON:0000990!1.12e-09!59;UBERON:0001042!1.51e-09!10;UBERON:0009145!1.51e-09!10;UBERON:0001008!2.05e-09!45;UBERON:0000974!3.64e-09!10;UBERON:0003133!3.76e-09!48;UBERON:0003127!5.21e-09!2;UBERON:0000341!5.86e-09!2;UBERON:0006562!1.19e-08!11;UBERON:0006554!4.90e-08!44;UBERON:0004176!1.10e-07!22;UBERON:0000365!1.64e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.33e-21;2!UBERON:0001723;3.99e-15;3!UBERON:0001033;3.99e-15;3!UBERON:0002372;5.05e-12;1!UBERON:0001961;5.05e-12;1!UBERON:0001744;5.05e-12;1!UBERON:0001042;5.05e-12;1!UBERON:0001735;5.05e-12;1!UBERON:0005795;5.62e-12;1!UBERON:0006834;1.39e-11;1!UBERON:0001136;1.39e-11;1!UBERON:0001343;1.39e-11;1!UBERON:0004910;1.39e-11;1!UBERON:0004813;1.39e-11;1!UBERON:0000365;3.90e-09;5!UBERON:0000002;3.77e-08;6!UBERON:0001560;3.77e-08;6!UBERON:0005910;9.33e-08;6!UBERON:0003126;7.98e-07;7!UBERON:0001005;7.98e-07;7!UBERON:0000341;9.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.56e-21,2;UBERON:0001723,3.99e-15,3;UBERON:0001033,3.99e-15,3;UBERON:0010056,3.99e-15,3;UBERON:0002372,5.05e-12,1;UBERON:0001961,5.05e-12,1;UBERON:0001744,5.05e-12,1;UBERON:0001735,5.05e-12,1;UBERON:0001136,1.19e-11,1;UBERON:0001343,1.19e-11,1;UBERON:0004910,1.19e-11,1;UBERON:0005154,1.19e-11,1;UBERON:0005295,1.19e-11,1;UBERON:0004813,1.19e-11,1;UBERON:0005297,1.19e-11,1;UBERON:0005294,1.19e-11,1;UBERON:0010141,1.19e-11,1;UBERON:0005891,1.19e-11,1;UBERON:0006834,1.81e-11,1;UBERON:0001042,3.75e-10,10;UBERON:0009145,3.75e-10,10;UBERON:0006562,2.82e-09,11;UBERON:0000365,3.44e-09,5;UBERON:0000002,3.77e-08,6;UBERON:0001560,3.77e-08,6;UBERON:0005795,6.31e-08,22;UBERON:0005910,8.41e-08,6;UBERON:0000072,1.21e-07,47;UBERON:0003126,8.34e-07,7;UBERON:0001005,8.34e-07,7;UBERON:0000341,9.96e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.0241725999993,7.31027455786072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.587954384486266,0,0,0,0,0,0,27.9328367486648,0,4.29363407483012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.314727528809989,0,0,0,0,0,8.64513028026149,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,2.81926008926669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0.534434810531121,0.36757959813938,0,0.909344378618873,4.55539021265503,0,0,15.9925486425736,0.476128862927481,0.129177819672012,0.248298857183432,0,0,0,9.79725365536326,2.39563310759697,6.39844503638581,1.14755528628282,2.32862249582209,0,0,0,0,0,1.1001729976458,5.69654649642034,0.665756774185513,0.201273793591026,0 | |||
|short_description=p3@KRT13 | |||
}} |
Revision as of 15:16, 20 January 2014
Short description: | p3@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KRT13_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | -45bp_to_ENST00000464634_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.19e-11 | 1 |
seminiferous tubule epithelial cell | 1.19e-11 | 1 |
Sertoli cell | 1.19e-11 | 1 |
transitional epithelial cell | 2.92e-11 | 4 |
urothelial cell | 2.92e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.56e-21 | 2 |
tongue | 3.99e-15 | 3 |
gustatory system | 3.99e-15 | 3 |
future tongue | 3.99e-15 | 3 |
tonsil | 5.05e-12 | 1 |
mucosa-associated lymphoid tissue | 5.05e-12 | 1 |
lymphoid tissue | 5.05e-12 | 1 |
tonsillar ring | 5.05e-12 | 1 |
mesothelium | 1.19e-11 | 1 |
seminiferous tubule of testis | 1.19e-11 | 1 |
epithelium of male gonad | 1.19e-11 | 1 |
epithelial cord | 1.19e-11 | 1 |
sex cord | 1.19e-11 | 1 |
seminiferous tubule epithelium | 1.19e-11 | 1 |
testis sex cord | 1.19e-11 | 1 |
genital ridge | 1.19e-11 | 1 |
primitive sex cord of indifferent gonad | 1.19e-11 | 1 |
coelomic epithelium | 1.19e-11 | 1 |
uterus or analog | 1.81e-11 | 1 |
chordate pharynx | 3.75e-10 | 10 |
pharyngeal region of foregut | 3.75e-10 | 10 |
pharynx | 2.82e-09 | 11 |
urothelium | 3.44e-09 | 5 |
uterine cervix | 3.77e-08 | 6 |
neck of organ | 3.77e-08 | 6 |
embryonic uterus | 6.31e-08 | 22 |
transitional epithelium | 8.41e-08 | 6 |
segment of respiratory tract | 1.21e-07 | 47 |
trachea | 8.34e-07 | 7 |
respiratory airway | 8.34e-07 | 7 |
throat | 9.96e-07 | 2 |