FFCP PHASE1:Hg19::chr17:29248734..29248747,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55803 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16487 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NPF8 | |||
|association_with_transcript=-6bp_to_NM_018404,uc002hfx.2,uc002hfy.2,uc010csk.2,uc010csl.2_5end | |||
|description=CAGE_peak_7_at_ADAP2_5end | |||
|id=chr17:29248734..29248747,+ | |||
|ontology_enrichment_celltype=CL:0002194!9.61e-34!63;CL:0000576!9.61e-34!63;CL:0000040!9.61e-34!63;CL:0000559!9.61e-34!63;CL:0002009!2.31e-32!65;CL:0002057!5.64e-31!42;CL:0000766!1.89e-29!76;CL:0000839!2.94e-29!70;CL:0002087!3.19e-29!119;CL:0000738!7.64e-29!140;CL:0000557!1.09e-28!71;CL:0000860!2.61e-28!45;CL:0002031!6.75e-25!124;CL:0000037!1.06e-22!172;CL:0000566!1.06e-22!172;CL:0000763!3.16e-22!112;CL:0000049!3.16e-22!112;CL:0002032!3.23e-22!165;CL:0000837!3.23e-22!165;CL:0000988!1.43e-20!182;CL:0002393!3.79e-17!9;CL:0002397!3.79e-17!9;CL:0000236!3.74e-14!14;CL:0000990!3.23e-07!8;CL:0000945!3.27e-07!24;CL:0000826!3.27e-07!24;CL:0000875!4.60e-07!3;CL:0002396!4.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.67e-29;13!CL:0000875;3.27e-21;3!CL:0002619;3.27e-21;3!CL:0002396;3.27e-21;3!CL:0000945;4.83e-16;24!CL:0000576;4.58e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.58e-27,14;CL:0000875,2.67e-21,3;CL:0002396,2.67e-21,3;CL:0002619,4.02e-21,3;CL:0000945,4.12e-16,24;CL:0000826,4.12e-16,24;CL:0002087,6.03e-15,115;CL:0002031,2.75e-14,120;CL:0000738,1.69e-12,136;CL:0002032,2.11e-10,161;CL:0000837,2.11e-10,161;CL:0000037,6.33e-10,168;CL:0000988,2.29e-09,177;CL:0002194,6.82e-09,59;CL:0000576,6.82e-09,59;CL:0000040,6.82e-09,59;CL:0000559,6.82e-09,59;CL:0002009,1.35e-08,61;CL:0000839,6.19e-08,66;CL:0000557,8.18e-08,67;CL:0002393,9.85e-08,9;CL:0002397,9.85e-08,9;CL:0000838,1.96e-07,52;CL:0000542,2.72e-07,53;CL:0000051,2.72e-07,53;CL:0000766,2.94e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.53e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.88e-29!102;UBERON:0003061!4.88e-29!102;UBERON:0002193!5.78e-28!112;UBERON:0002371!3.19e-24!80;UBERON:0001474!9.02e-22!86;UBERON:0007023!4.22e-19!115;UBERON:0002405!1.04e-17!115;UBERON:0004765!5.98e-17!101;UBERON:0001434!5.98e-17!101;UBERON:0003081!8.44e-09!216;UBERON:0001049!4.84e-08!57;UBERON:0005068!4.84e-08!57;UBERON:0006241!4.84e-08!57;UBERON:0007135!4.84e-08!57;UBERON:0002780!5.35e-08!41;UBERON:0001890!5.35e-08!41;UBERON:0006240!5.35e-08!41;UBERON:0001893!9.99e-08!34;UBERON:0003080!1.01e-07!42;UBERON:0001869!3.75e-07!32;UBERON:0002204!4.95e-07!167;UBERON:0002791!5.66e-07!33;UBERON:0002619!5.77e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.53e-16;1!UBERON:0002360;6.17e-09;2!UBERON:0000094;6.17e-09;2!UBERON:0010743;6.17e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,3.07e-16,1;UBERON:0007645,3.07e-16,1;UBERON:0007647,3.07e-16,1;UBERON:0010115,3.07e-16,1;UBERON:0002360,8.74e-09,2;UBERON:0000094,8.74e-09,2;UBERON:0010743,8.74e-09,2;UBERON:0002390,4.38e-07,98;UBERON:0003061,4.38e-07,98;UBERON:0002371,7.27e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,1.56740831967947,0,1.03030227053675,1.30858414901608,0,0.242584061187816,0.697287110717054,0,0,0.28769239232215,0.512321413058201,0,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0,0.224723484445085,0,0,0.639337125799041,0.329851300186716,0.797854630486527,0,0.290209238628584,0,0.622822248995575,0,0,0.65156653411535,0,0,0,0.633765858935825,0.637812899895131,0.209658645508376,0.786300418025466,0.300353785683013,0.48217676009124,1.99508920618874,1.19350006319454,0.182664153764634,3.51992488922645,0.546138611262131,2.66852776159066,1.70692089026603,1.20118796110804,0.574752439954483,0.661044872784862,1.90810750907073,0.569212969109448,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.97364218096405,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0.30607276163049,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0.132864840313363,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.891139200981258,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.413731983447581,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@ADAP2 | |||
}} |
Revision as of 14:33, 20 January 2014
Short description: | p7@ADAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ADAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_NM_018404, uc002hfx.2, uc002hfy.2, uc010csk.2, uc010csl.2_5end |
EntrezGene: | ADAP2 |
HGNC: | 16487 |
UniProt: | Q9NPF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.58e-27 | 14 |
non-classical monocyte | 2.67e-21 | 3 |
CD14-low, CD16-positive monocyte | 2.67e-21 | 3 |
adult endothelial progenitor cell | 4.02e-21 | 3 |
lymphocyte of B lineage | 4.12e-16 | 24 |
pro-B cell | 4.12e-16 | 24 |
nongranular leukocyte | 6.03e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.75e-14 | 120 |
leukocyte | 1.69e-12 | 136 |
hematopoietic oligopotent progenitor cell | 2.11e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.11e-10 | 161 |
hematopoietic stem cell | 6.33e-10 | 168 |
hematopoietic cell | 2.29e-09 | 177 |
monopoietic cell | 6.82e-09 | 59 |
monocyte | 6.82e-09 | 59 |
monoblast | 6.82e-09 | 59 |
promonocyte | 6.82e-09 | 59 |
macrophage dendritic cell progenitor | 1.35e-08 | 61 |
myeloid lineage restricted progenitor cell | 6.19e-08 | 66 |
granulocyte monocyte progenitor cell | 8.18e-08 | 67 |
intermediate monocyte | 9.85e-08 | 9 |
CD14-positive, CD16-positive monocyte | 9.85e-08 | 9 |
lymphoid lineage restricted progenitor cell | 1.96e-07 | 52 |
lymphocyte | 2.72e-07 | 53 |
common lymphoid progenitor | 2.72e-07 | 53 |
myeloid leukocyte | 2.94e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
dura mater | 3.07e-16 | 1 |
future meninx | 3.07e-16 | 1 |
ectomeninx | 3.07e-16 | 1 |
future dura mater | 3.07e-16 | 1 |
meninx | 8.74e-09 | 2 |
membrane organ | 8.74e-09 | 2 |
meningeal cluster | 8.74e-09 | 2 |
hematopoietic system | 4.38e-07 | 98 |
blood island | 4.38e-07 | 98 |
bone marrow | 7.27e-07 | 76 |