FFCP PHASE1:Hg19::chr17:16843698..16843703,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr17:16843698..16843703,- | |||
|id=chr17:16843698..16843703,- | |||
|ontology_enrichment_celltype=CL:0000945!5.65e-57!24;CL:0000826!5.65e-57!24;CL:0000542!3.80e-31!53;CL:0000051!3.80e-31!53;CL:0000838!4.21e-28!52;CL:0000236!2.73e-21!14;CL:0002087!3.94e-15!119;CL:0000785!2.39e-13!2;CL:0000955!2.39e-13!2;CL:0000818!2.39e-13!2;CL:0000954!2.39e-13!2;CL:0000816!2.39e-13!2;CL:0002031!9.77e-13!124;CL:0000738!2.69e-12!140;CL:0002032!7.32e-10!165;CL:0000837!7.32e-10!165;CL:0000037!2.62e-09!172;CL:0000566!2.62e-09!172;CL:0000817!3.39e-09!3;CL:0000988!1.37e-08!182;CL:0000946!1.15e-07!1;CL:0000786!1.15e-07!1;CL:0000980!1.15e-07!1;CL:0000819!2.31e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.12e-34;24!CL:0000542;3.91e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.05e-34,24;CL:0000826,1.05e-34,24;CL:0000838,2.36e-16,52;CL:0000542,4.70e-16,53;CL:0000051,4.70e-16,53;CL:0002087,1.44e-07,115;CL:0002031,2.87e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;3.91e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.35e-15!10;DOID:630!5.58e-08!1;DOID:0050177!5.58e-08!1;DOID:0050427!5.58e-08!1;DOID:4960!8.28e-08!1;DOID:0070004!8.28e-08!1;DOID:2355!1.80e-07!1;DOID:12603!2.17e-07!1;DOID:0060073!2.31e-07!1;DOID:8675!2.31e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;7.05e-34;1!DOID:0050177;7.05e-34;1!DOID:0050427;7.05e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.06e-34,1;DOID:0050177,7.06e-34,1;DOID:0050427,7.06e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.81e-09!3;UBERON:0004854!1.81e-09!3;UBERON:0009034!1.81e-09!3;UBERON:0002095!1.81e-09!3;UBERON:0004782!1.81e-09!3;UBERON:0003281!1.81e-09!3;UBERON:0009664!1.81e-09!3;UBERON:0002296!1.81e-09!3;UBERON:0005602!1.81e-09!3;UBERON:0001179!1.81e-09!3;UBERON:0006293!1.81e-09!3;UBERON:0000029!6.37e-08!1;UBERON:0001736!1.22e-07!1;UBERON:0006298!1.22e-07!1;UBERON:0002372!2.47e-07!1;UBERON:0001961!2.47e-07!1;UBERON:0001744!2.47e-07!1;UBERON:0001735!2.47e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.89e-12;3!UBERON:0004177;7.01e-08;5!UBERON:0005057;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.24e-12,3;UBERON:0004854,3.24e-12,3;UBERON:0009034,3.24e-12,3;UBERON:0002095,3.24e-12,3;UBERON:0004782,3.24e-12,3;UBERON:0003281,3.24e-12,3;UBERON:0009664,3.24e-12,3;UBERON:0002296,3.24e-12,3;UBERON:0005602,3.24e-12,3;UBERON:0001179,3.24e-12,3;UBERON:0006293,3.24e-12,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8074188368443,4.51553241974702,4.01424984699764,0,0,0,0,0,0,0,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0.661044872784862,0,0,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96935688737711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0,1.39917618294901,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.805095174364105,1.60284246151616 | |||
|short_description=p@chr17:16843698..16843703,- | |||
}} |
Revision as of 14:05, 20 January 2014
Short description: | p@chr17:16843698..16843703, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:16843698..16843703, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.05e-34 | 24 |
pro-B cell | 1.05e-34 | 24 |
lymphoid lineage restricted progenitor cell | 2.36e-16 | 52 |
lymphocyte | 4.70e-16 | 53 |
common lymphoid progenitor | 4.70e-16 | 53 |
nongranular leukocyte | 1.44e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.87e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.24e-12 | 3 |
gastrointestinal system mesentery | 3.24e-12 | 3 |
stomach region | 3.24e-12 | 3 |
mesentery | 3.24e-12 | 3 |
gastrointestinal system serosa | 3.24e-12 | 3 |
mesentery of stomach | 3.24e-12 | 3 |
gut mesentery | 3.24e-12 | 3 |
dorsal mesentery | 3.24e-12 | 3 |
dorsal mesogastrium | 3.24e-12 | 3 |
peritoneal cavity | 3.24e-12 | 3 |
spleen primordium | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.06e-34 | 1 |
monogenic disease | 7.06e-34 | 1 |
xeroderma pigmentosum | 7.06e-34 | 1 |