FFCP PHASE1:Hg19::chr17:15164041..15164052,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5376 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9118 | |||
|TSSclassifier=strong | |||
|UniProt=Q01453,Q6FH25 | |||
|association_with_transcript=40bp_to_NM_153322,uc002goj.2_5end | |||
|description=CAGE_peak_7_at_PMP22_5end | |||
|id=chr17:15164041..15164052,- | |||
|ontology_enrichment_celltype=CL:0000766!2.37e-14!76;CL:0000839!1.42e-12!70;CL:0000557!2.18e-11!71;CL:0002057!5.66e-11!42;CL:0000763!2.61e-10!112;CL:0000049!2.61e-10!112;CL:0002194!4.01e-10!63;CL:0000576!4.01e-10!63;CL:0000040!4.01e-10!63;CL:0000559!4.01e-10!63;CL:0000860!7.90e-10!45;CL:0002009!2.50e-09!65 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.67e-22;39!CL:0000234;7.67e-22;39!CL:0000860;3.80e-19;33!CL:0002057;3.80e-19;33!CL:0000766;1.57e-13;69!CL:0000763;3.32e-12;100!CL:0000097;9.89e-12;5!CL:0000576;2.99e-11;48!CL:0000235;2.20e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.29e-29,72;CL:0000839,3.29e-26,66;CL:0000557,1.09e-25,67;CL:0000763,3.99e-24,108;CL:0000049,3.99e-24,108;CL:0000473,7.45e-23,48;CL:0000234,7.45e-23,48;CL:0002194,2.87e-20,59;CL:0000576,2.87e-20,59;CL:0000040,2.87e-20,59;CL:0000559,2.87e-20,59;CL:0002009,2.27e-19,61;CL:0000860,5.63e-16,42;CL:0002057,5.63e-16,42;CL:0002032,1.28e-13,161;CL:0000837,1.28e-13,161;CL:0000988,5.39e-13,177;CL:0000037,1.30e-12,168;CL:0000738,5.61e-12,136;CL:0000097,6.82e-12,5;CL:0002028,6.82e-12,5;CL:0002031,1.19e-11,120;CL:0000235,2.66e-10,6;CL:0002087,5.81e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;7.88e-12;42!CL:0000049;1.05e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.08e-15!115;UBERON:0001474!1.33e-09!86;UBERON:0002371!3.03e-09!80;UBERON:0000062!6.09e-09!511;UBERON:0001017!7.22e-09!82;UBERON:0001049!7.38e-09!57;UBERON:0005068!7.38e-09!57;UBERON:0006241!7.38e-09!57;UBERON:0007135!7.38e-09!57;UBERON:0004765!2.07e-08!101;UBERON:0001434!2.07e-08!101;UBERON:0005743!3.22e-08!86;UBERON:0000073!1.46e-07!94;UBERON:0001016!1.46e-07!94;UBERON:0000468!4.64e-07!659;UBERON:0000955!5.68e-07!69;UBERON:0006238!5.68e-07!69;UBERON:0002616!8.13e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.28e-21,76;UBERON:0001474,4.92e-21,82;UBERON:0004765,2.24e-18,90;UBERON:0001434,4.69e-18,100;UBERON:0002405,2.66e-17,93;UBERON:0002390,5.62e-16,98;UBERON:0003061,5.62e-16,98;UBERON:0002193,1.05e-13,108;UBERON:0002204,1.07e-11,167 | |||
|phase1_expression=0.726713517082227,1.2846031433459,0.845726424575827,0,1.78784437770915,0,2.53299878168311,0,1.30592814099919,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.547497700291537,0.251085279189606,0,0,0,1.57345710739562,0.383829398097213,0.77408061658038,0,0,0,0,0,0,0,0,0,2.01523926815932,0.647787332037959,1.28787783817093,0.145398238779565,1.51150377475524,0.727752183563449,0.929716147622738,0.411167888021826,0.619412741790207,2.8769239232215,2.56160706529101,2.36482229888585,1.03423704220986,2.5819387343353,5.41705946377367,0.941211697713023,4.91231070104122,1.79778787556068,1.83650335422542,8.66508373105453,1.91801137739712,1.31940520074686,1.59570926097305,1.27867425159808,0.290209238628584,0.56738522469114,0.622822248995575,0,4.17186334736161,2.82345498116652,0.605399502633369,1.47311054395026,1.26584954976354,0.422510572623884,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.327447688744282,0,0,0.324547393654683,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.71153252537342,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0.379891534993739,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0.570471821544449,0,0,0.161872944368132,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0.635795703478686,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0.389748020644795,0,0.368199594569197,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.330881918197182,0.217879444092406,0,0.269662616320329,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0.190254152234598,0.790204397959275,0,2.46217006087397,0,2.22946743433092,0,0,0,0,0.290633938513962,0.383382679165211,2.46331618947972,1.76096868026452,2.90259361757081,1.58531948758658,1.00993946741104,0.317489471460845,0,0,0,0.205654985406647,0.600686115687835,0.285826432630578,0.112131084345361,0,0.22001485746285,0.387815147273333,0,0,0,0,0,0,0,0.285955987316295,4.88359444852299,0,0,0,0,0,0.871533458600294,0.399891964728228,2.43247561282381,1.50677127429638,2.10833939483032,0.239624855491583,1.14861935834114,0,0.434343920002738,0.205476322550383,0.537182889719687,0.112085143993527,0.197030760201927,0,0.128343036279748,2.7950408664471,2.60279707715243,0,0.335032530668698,0,0,5.9832291840805,0.414415513436035,0.12269149171914,0,0,0.623912584592421,0,0,0,0.601892199455438,0,1.03473071292505,0,0,0.260650843404249,0,1.02943027143257,0,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0,0.561320188866147,0.768834895534206,1.02341449813341,0.160853921143607,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.697262270759755,0.120859449591622,0,0,0.459257792658427,0.182091168006717,0.262248829918848,0,0,0,0,0,0,1.19065593693561,0,0,0,0,0.254876273045038,0,0,0,0.522870902049801,0,0,0,0.412164046590889,0,0.41254749960294,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0.94443704049192,0,0.308033580176089,0,0,0,0,0,0,0.38126038784765,0,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0.272999822815972,1.41405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.0982490410131212,0,0,1.05553817648832,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,2.59684583357601,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0.556812347790485,1.23087398947712,1.08182271390393,0.33307196799782,1.4098700508785,0.18714054040822,1.02555725490326,0,0,0.568272293612826,0,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0,0.20453736500431,0,0.311039587661807,0.269605053441981,0.179021174675609,0,0.690503839458535,0,0,0.969332746095218,0.649376687132959,0,0.260427761085233,0,1.44999915086959,0,0,0,0,0,0.520874984799877,0,0.482385754501632,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0.139423744278603,0.461701551022782,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0.156980256395025,1.16348177330109,0,0,0.167821586975843,0,3.01979500062719,0,0,0.141353071433941,0,0,0.265372693510018,0.611030144933625,0,0,0,1.55022605855557,0,1.40558667435203,0,0,0,0.394584402849391,0,0,1.89559738885464,0.300646838828985,0.414752765588989,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0.52418000472609,0,0.0967563312890851,0,0,0.581934098930517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| |||
|short_description=p7@PMP22 | |||
}} |
Revision as of 14:01, 20 January 2014
Short description: | p7@PMP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PMP22_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_NM_153322, uc002goj.2_5end |
EntrezGene: | PMP22 |
HGNC: | 9118 |
UniProt: | Q01453Q6FH25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.29e-29 | 72 |
myeloid lineage restricted progenitor cell | 3.29e-26 | 66 |
granulocyte monocyte progenitor cell | 1.09e-25 | 67 |
myeloid cell | 3.99e-24 | 108 |
common myeloid progenitor | 3.99e-24 | 108 |
defensive cell | 7.45e-23 | 48 |
phagocyte | 7.45e-23 | 48 |
monopoietic cell | 2.87e-20 | 59 |
monocyte | 2.87e-20 | 59 |
monoblast | 2.87e-20 | 59 |
promonocyte | 2.87e-20 | 59 |
macrophage dendritic cell progenitor | 2.27e-19 | 61 |
classical monocyte | 5.63e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.63e-16 | 42 |
hematopoietic oligopotent progenitor cell | 1.28e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.28e-13 | 161 |
hematopoietic cell | 5.39e-13 | 177 |
hematopoietic stem cell | 1.30e-12 | 168 |
leukocyte | 5.61e-12 | 136 |
mast cell | 6.82e-12 | 5 |
basophil mast progenitor cell | 6.82e-12 | 5 |
hematopoietic lineage restricted progenitor cell | 1.19e-11 | 120 |
macrophage | 2.66e-10 | 6 |
nongranular leukocyte | 5.81e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.28e-21 | 76 |
bone element | 4.92e-21 | 82 |
skeletal element | 2.24e-18 | 90 |
skeletal system | 4.69e-18 | 100 |
immune system | 2.66e-17 | 93 |
hematopoietic system | 5.62e-16 | 98 |
blood island | 5.62e-16 | 98 |
hemolymphoid system | 1.05e-13 | 108 |
musculoskeletal system | 1.07e-11 | 167 |