FFCP PHASE1:Hg19::chr17:7750628..7750677,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23135 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-186bp_to_uc002gix.2_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_KDM6B_5end | |||
|id=chr17:7750628..7750677,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.91e-19!42;CL:0000860!1.71e-18!45;CL:0000766!1.39e-14!76;CL:0000557!4.27e-13!71;CL:0000839!1.19e-11!70;CL:0002009!2.07e-11!65;CL:0002194!1.99e-10!63;CL:0000576!1.99e-10!63;CL:0000040!1.99e-10!63;CL:0000559!1.99e-10!63;CL:0000738!1.80e-09!140;CL:0000763!1.68e-08!112;CL:0000049!1.68e-08!112;CL:0002031!5.10e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.15e-87;33!CL:0002057;2.15e-87;33!CL:0000473;8.56e-63;39!CL:0000234;8.56e-63;39!CL:0000576;1.44e-40;48!CL:0000766;5.49e-30;69!CL:0000775;6.51e-13;3!CL:0000763;1.56e-12;100!CL:0002087;2.89e-12;104!CL:0000738;1.52e-11;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.36e-78,42;CL:0002057,8.36e-78,42;CL:0000473,8.64e-72,48;CL:0000234,8.64e-72,48;CL:0000766,1.50e-58,72;CL:0002009,1.56e-57,61;CL:0002194,7.20e-56,59;CL:0000576,7.20e-56,59;CL:0000040,7.20e-56,59;CL:0000559,7.20e-56,59;CL:0000557,1.58e-55,67;CL:0000839,6.35e-53,66;CL:0000738,5.58e-39,136;CL:0000763,9.68e-39,108;CL:0000049,9.68e-39,108;CL:0002031,1.23e-35,120;CL:0002087,3.90e-35,115;CL:0000037,8.19e-30,168;CL:0002032,1.06e-29,161;CL:0000837,1.06e-29,161;CL:0000988,7.90e-28,177;CL:0000775,5.79e-13,3;CL:0000134,8.02e-11,354;CL:0002320,1.99e-10,361;CL:0000219,4.86e-09,386;CL:0000048,2.37e-07,427;CL:0000723,4.05e-07,433;CL:0000034,8.07e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-56;42!CL:0000049;1.23e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.56e-13!102;UBERON:0003061!1.56e-13!102;UBERON:0002193!6.48e-12!112;UBERON:0002371!1.11e-10!80;UBERON:0001474!3.27e-10!86;UBERON:0002405!8.74e-09!115;UBERON:0004765!1.62e-08!101;UBERON:0001434!1.62e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.43e-48,76;UBERON:0001474,5.18e-44,82;UBERON:0002390,4.08e-43,98;UBERON:0003061,4.08e-43,98;UBERON:0004765,2.01e-39,90;UBERON:0002193,2.31e-38,108;UBERON:0002405,6.64e-38,93;UBERON:0001434,1.04e-34,100;UBERON:0003081,1.08e-17,203;UBERON:0002204,1.20e-17,167;UBERON:0002384,6.87e-10,371;UBERON:0000926,7.74e-10,315;UBERON:0004120,7.74e-10,315;UBERON:0006603,7.74e-10,315 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0.125542639594803,0.305653622991805,0.410502947249729,0.236132343941038,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0.369754010166788,0,0,0,0,2.00544447470142,0.651032612147555,0,0,0,1.16318591023652,1.51150377475524,1.4555043671269,5.34586784883075,9.45686142450199,4.64559556342655,10.0692337312753,5.63553554364021,1.89185783910868,4.13694816883942,4.51839278508678,4.06279459783025,6.21199720490596,3.82068610080984,1.34834090667051,11.6311879100943,7.70229664982625,11.5080682643827,0.989553900560148,1.79517291859469,1.70489900213078,10.447532590629,10.7803192691317,11.2108004819203,7.5374599577023,5.21482918420201,1.73751075764093,8.47559303686716,4.78760926783834,2.21523671208619,0,0,0,0.22465726229299,0.150176892841506,0.803627933485401,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681968437569,0,0.560508562981536,0,0.393419540227666,1.17903228824749,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.222820913770347,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0,1.06976078313403,0.579297615531196,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0.392937226493138,0,0.370784442784429,0,0,0.26591592103773,0.476981248610684,0,0,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0,0,0.860509862246441,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.329250856225877,0,0.100528972411631,0.370353780634118,0.325808305310325,0,0,0,0,0,0.925971025153221,0,0,0.858486162094873,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0,52.22230321697,0.176096868026452,0.621984346622316,0.576479813667846,0.75745460055828,0,0.763976851116555,0,0,0.205654985406647,0.600686115687835,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0,0,0.099972991182057,0,1.50677127429638,0,0,0,0,0,0,0,0,0.394061520403854,1.2937654491571,0.128343036279748,0.508189248444927,0,0,0.167516265334349,0,6.74106321552464,23.932916736322,2.90090859405225,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.686286847621712,0,1.72571360654893,0.74709290462411,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0.114814448164607,0.182091168006717,0,0.451199612907412,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,1.30012049207304,1.6068392984416,0,0,0.15350367472613,0,0,0,0.0852266274161009,0.178064071293475,0,0.384380134730212,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,0,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0.507447609232169,0,1.13929437434833,0,0.411362273086194,0.648473311192717,0.540031437238115,2.37937552888281,0,0,0,0,0,0.142283686696828,0.159426272728822,0,0,0,0.649243880549111,0,0.228234679033192,0,0,0.169291777801603,0,0.403599414382095,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0.246169610922139,0.311039587661807,0.0898683511473268,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,1.04171104434093,0.0874599999961957,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0,1.52581736317083,0.774054819518572,0.295547618953547,0,0,0,0.0769502585037971,0.113942055847001,0,0.269272933229316,0.217294743844016,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0.649165919226273,0,0.265372693510018,0,0.593042257361244,0.123563938946503,0.208843899010911,0.269604531922708,0,0,0,0,0,0,1.20990716048664,0.61214552326098,0,0.901940516486955,0,0,0,0,0,0.569219092059585,0.277349346026277,0,0.0979923974143777,0,0.52418000472609,0,0,0.0730893170861856,0.246346371159628,0.290967049465258,0.176512253383001,0.225980740780532,0.137041924646751,0,0.0633107959558787,0.391102765469606,0.0801588202515337,0,0.39961921916426,0.72045208577053,0.343609788497747,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0.525774708558629,0.279282401272254,0.229160424011684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| |||
|short_description=p3@KDM6B | |||
}} |
Revision as of 13:42, 20 January 2014
Short description: | p3@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KDM6B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -186bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.36e-78 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.36e-78 | 42 |
defensive cell | 8.64e-72 | 48 |
phagocyte | 8.64e-72 | 48 |
myeloid leukocyte | 1.50e-58 | 72 |
macrophage dendritic cell progenitor | 1.56e-57 | 61 |
monopoietic cell | 7.20e-56 | 59 |
monocyte | 7.20e-56 | 59 |
monoblast | 7.20e-56 | 59 |
promonocyte | 7.20e-56 | 59 |
granulocyte monocyte progenitor cell | 1.58e-55 | 67 |
myeloid lineage restricted progenitor cell | 6.35e-53 | 66 |
leukocyte | 5.58e-39 | 136 |
myeloid cell | 9.68e-39 | 108 |
common myeloid progenitor | 9.68e-39 | 108 |
hematopoietic lineage restricted progenitor cell | 1.23e-35 | 120 |
nongranular leukocyte | 3.90e-35 | 115 |
hematopoietic stem cell | 8.19e-30 | 168 |
hematopoietic oligopotent progenitor cell | 1.06e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-29 | 161 |
hematopoietic cell | 7.90e-28 | 177 |
neutrophil | 5.79e-13 | 3 |
mesenchymal cell | 8.02e-11 | 354 |
connective tissue cell | 1.99e-10 | 361 |
motile cell | 4.86e-09 | 386 |
multi fate stem cell | 2.37e-07 | 427 |
somatic stem cell | 4.05e-07 | 433 |
stem cell | 8.07e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.43e-48 | 76 |
bone element | 5.18e-44 | 82 |
hematopoietic system | 4.08e-43 | 98 |
blood island | 4.08e-43 | 98 |
skeletal element | 2.01e-39 | 90 |
hemolymphoid system | 2.31e-38 | 108 |
immune system | 6.64e-38 | 93 |
skeletal system | 1.04e-34 | 100 |
lateral plate mesoderm | 1.08e-17 | 203 |
musculoskeletal system | 1.20e-17 | 167 |
connective tissue | 6.87e-10 | 371 |
mesoderm | 7.74e-10 | 315 |
mesoderm-derived structure | 7.74e-10 | 315 |
presumptive mesoderm | 7.74e-10 | 315 |