FFCP PHASE1:Hg19::chr17:5322512..5322530,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84268 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28641 | |||
|TSSclassifier=weak | |||
|UniProt=E9PDG9,Q86UA6,E9PES3,F5GYE1,F5H3Q7,B3KTT3,B4DI36 | |||
|association_with_transcript=-430bp_to_ENST00000381208,ENST00000381209,ENST00000405578,ENST00000536255,ENST00000539417,ENST00000540734,NM_001033002,NM_001160243,NM_001160244,NM_001160246,NM_001160266,NM_001160267,NR_027678,NR_027679,NR_027680,NR_027681,NR_027682,NR_027683,NR_027684,NR_027685,uc002gbp.1,uc002gbq.2,uc002gbr.2,uc002gbs.2,uc002gbt.2,uc002gbu.2,uc002gbv.2,uc002gbw.2,uc010vsz.1,uc010vta.1,uc010vtb.1_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_6_at_RPAIN_5end | |||
|id=chr17:5322512..5322530,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.24e-16!24;CL:0000826!3.24e-16!24;CL:0000738!1.90e-15!140;CL:0000236!3.73e-14!14;CL:0002087!1.26e-13!119;CL:0002031!3.84e-13!124;CL:0000838!7.42e-13!52;CL:0000542!2.04e-12!53;CL:0000051!2.04e-12!53;CL:0000037!1.38e-10!172;CL:0000566!1.38e-10!172;CL:0000988!5.58e-10!182;CL:0002032!5.32e-09!165;CL:0000837!5.32e-09!165 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.28e-69;13!CL:0000945;3.18e-43;24!CL:0000542;7.32e-18;53!CL:0000167;1.42e-08;1!CL:0000164;1.42e-08;1!CL:0000502;1.42e-08;1!CL:0000172;1.42e-08;1!CL:0000173;1.42e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.25e-63,14;CL:0000945,3.64e-43,24;CL:0000826,3.64e-43,24;CL:0000838,4.58e-22,52;CL:0000542,1.32e-21,53;CL:0000051,1.32e-21,53;CL:0002031,3.61e-11,120;CL:0002087,4.50e-10,115;CL:0000738,1.55e-09,136;CL:0000167,9.74e-09,1;CL:0000164,9.74e-09,1;CL:0000502,9.74e-09,1;CL:0000172,9.74e-09,1;CL:0000173,9.74e-09,1;CL:0002351,9.74e-09,1;CL:0002032,1.25e-07,161;CL:0000837,1.25e-07,161;CL:0000037,3.37e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;7.32e-18;53!CL:0002351;1.42e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.42e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.74e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;7.74e-09;1!UBERON:0005352;7.74e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,7.75e-09,1;UBERON:0005352,7.75e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,1.31694240986513,0.426507697462265,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0.727752183563449,0,0.822335776043652,0.619412741790207,0,0.512321413058201,0.47296445977717,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0,0.426224750532694,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0,0.150176892841506,0,1.42506371870624,0.59675003159727,0.365328307529268,10.5597746676794,5.46138611262132,4.44754626931777,8.96133467389665,5.60554381850417,6.32227683949932,7.27149360063348,7.63243003628291,1.1384259382189,2.93618594685469,2.29363936875137,1.32171328579026,0,0.526768169550154,0.196709770113833,0,0.616804496998528,0,0.977766799900771,1.89379122293893,0,0.111410456885174,1.17842362989935,1.55073726208535,0.541607727530031,0,0,0,0,0.289803085735052,0.296573126324121,0.267540828089713,0,0.113309342697566,0.766440987203842,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0.56530794192401,0,0,0.208994966536811,0.775250277507987,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0,0.310983165046111,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.335964256397719,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0.862856803274467,0.213455115606889,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0.451199612907412,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0,0,0.714695326373367,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.334330152832435,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0.251932747854276,0.20453736500431,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.869178975376065,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0.296521128680622,0,0,0.067401132980677,0,0,0.729819156862664,0.586993856796269,0.242780379534093,2.36750641709634,0,0,0,0.901940516486955,0.207376382794494,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0.432271251462318,0,0.343189995723929,0,0.124252535565433,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0.137539436597234,0.83088067605837,0.674921674654501,10.0594254092533,0,0,0.157611414598396,0.314727528809989,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0.197611631897944,0.121792598380896,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.196295437002051,0,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.443568258651136,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,1.21393120847326,0.91064876540519,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0.157115589916002,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,0,0,0.447421727191169,0.392600934460972,0,0,0,0,0,0,0,0,0.5647304101948,0,0.150962843566674,0,0.218559560503957,3.76253837089218,0,1.88541237681301,0,0,0,0.169927114687817,0,0.257831551894309,0.0999411559249289,0.357107877211315,0,0.0802413666891683,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0,0,0,0,0,0.218531143927391,0,3.67159787071134,0.534434810531121,0.735159196278759,1.0028301571695,0.0757786982182394,0.26796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| |||
|short_description=p6@RPAIN | |||
}} |
Revision as of 13:20, 20 January 2014
Short description: | p6@RPAIN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RPAIN_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -430bp_to_ENST00000381208, ENST00000381209, ENST00000405578, ENST00000536255, ENST00000539417, ENST00000540734, NM_001033002, NM_001160243, NM_001160244, NM_001160246, NM_001160266, NM_001160267, NR_027678, NR_027679, NR_027680, NR_027681, NR_027682, NR_027683, NR_027684, N |
EntrezGene: | RPAIN |
HGNC: | 28641 |
UniProt: | E9PDG9Q86UA6E9PES3F5GYE1F5H3Q7B3KTT3B4DI36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.25e-63 | 14 |
lymphocyte of B lineage | 3.64e-43 | 24 |
pro-B cell | 3.64e-43 | 24 |
lymphoid lineage restricted progenitor cell | 4.58e-22 | 52 |
lymphocyte | 1.32e-21 | 53 |
common lymphoid progenitor | 1.32e-21 | 53 |
hematopoietic lineage restricted progenitor cell | 3.61e-11 | 120 |
nongranular leukocyte | 4.50e-10 | 115 |
leukocyte | 1.55e-09 | 136 |
peptide hormone secreting cell | 9.74e-09 | 1 |
enteroendocrine cell | 9.74e-09 | 1 |
type D enteroendocrine cell | 9.74e-09 | 1 |
somatostatin secreting cell | 9.74e-09 | 1 |
pancreatic D cell | 9.74e-09 | 1 |
progenitor cell of endocrine pancreas | 9.74e-09 | 1 |
hematopoietic oligopotent progenitor cell | 1.25e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.25e-07 | 161 |
hematopoietic stem cell | 3.37e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 7.75e-09 | 1 |
spermatic cord | 7.75e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.74e-09 | 1 |