FFCP PHASE1:Hg19::chr17:5138587..5138602,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388325 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33504 | |||
|TSSclassifier=not | |||
|UniProt=Q6UWF3 | |||
|association_with_transcript=-450bp_to_ENST00000399600_5end | |||
|coexpression_cluster_id=C780 | |||
|description=CAGE_peak_3_at_SCIMP_5end | |||
|id=chr17:5138587..5138602,- | |||
|ontology_enrichment_celltype=CL:0002087!5.03e-61!119;CL:0000738!3.40e-55!140;CL:0002031!1.27e-51!124;CL:0002057!1.76e-44!42;CL:0000037!3.18e-43!172;CL:0000566!3.18e-43!172;CL:0000860!7.10e-41!45;CL:0002032!7.46e-41!165;CL:0000837!7.46e-41!165;CL:0000988!6.99e-40!182;CL:0002194!1.96e-39!63;CL:0000576!1.96e-39!63;CL:0000040!1.96e-39!63;CL:0000559!1.96e-39!63;CL:0002009!6.73e-38!65;CL:0000766!5.83e-37!76;CL:0000839!1.92e-34!70;CL:0000945!2.04e-34!24;CL:0000826!2.04e-34!24;CL:0000557!8.26e-34!71;CL:0000763!9.09e-23!112;CL:0000049!9.09e-23!112;CL:0000236!3.56e-22!14;CL:0000838!3.50e-17!52;CL:0000542!9.80e-17!53;CL:0000051!9.80e-17!53;CL:0002393!3.99e-13!9;CL:0002397!3.99e-13!9;CL:0000134!7.56e-12!358;CL:0002320!2.62e-11!365;CL:0000219!2.02e-09!390;CL:0000875!1.48e-08!3;CL:0002396!1.48e-08!3;CL:0000048!1.14e-07!430;CL:0000723!2.37e-07!436;CL:0000767!3.18e-07!3;CL:0000842!3.70e-07!3;CL:0000034!6.08e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.25e-35;24!CL:0000875;3.35e-20;3!CL:0002396;3.35e-20;3!CL:0000236;4.10e-17;13!CL:0002393;1.66e-10;6!CL:0002397;1.66e-10;6!CL:0000840;7.10e-10;5!CL:0000576;5.76e-09;48!CL:0000542;9.38e-09;53!CL:0000738;1.77e-08;136!CL:0002087;1.79e-08;104!CL:0000946;1.97e-07;1!CL:0000786;1.97e-07;1!CL:0000766;6.47e-07;69!CL:0000990;9.83e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.86e-37,115;CL:0000945,3.75e-35,24;CL:0000826,3.75e-35,24;CL:0002031,8.13e-33,120;CL:0000738,8.91e-31,136;CL:0002393,1.04e-25,9;CL:0002397,1.04e-25,9;CL:0000037,5.64e-24,168;CL:0002032,3.13e-23,161;CL:0000837,3.13e-23,161;CL:0000988,1.68e-22,177;CL:0000236,3.49e-21,14;CL:0002194,1.39e-20,59;CL:0000576,1.39e-20,59;CL:0000040,1.39e-20,59;CL:0000559,1.39e-20,59;CL:0000875,3.58e-20,3;CL:0002396,3.58e-20,3;CL:0002009,8.02e-20,61;CL:0000839,4.08e-18,66;CL:0000557,8.34e-18,67;CL:0000473,1.21e-16,48;CL:0000234,1.21e-16,48;CL:0000766,2.23e-16,72;CL:0000860,2.86e-16,42;CL:0002057,2.86e-16,42;CL:0000838,5.27e-15,52;CL:0000542,1.12e-14,53;CL:0000051,1.12e-14,53;CL:0000840,4.91e-10,5;CL:0001029,4.91e-10,5;CL:0000763,5.63e-10,108;CL:0000049,5.63e-10,108;CL:0000134,1.23e-08,354;CL:0002320,2.30e-08,361;CL:0000946,1.39e-07,1;CL:0000786,1.39e-07,1;CL:0000980,1.39e-07,1;CL:0000219,2.08e-07,386;CL:0000990,7.73e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.51e-11;42!CL:0000051;9.38e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.97e-07;1!DOID:0050177;1.97e-07;1!DOID:0050427;1.97e-07;1!DOID:2355;1.97e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.58e-07,1;DOID:0050177,1.58e-07,1;DOID:0050427,1.58e-07,1;DOID:2355,1.91e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.28e-40!102;UBERON:0003061!1.28e-40!102;UBERON:0002193!1.51e-39!112;UBERON:0002371!7.94e-29!80;UBERON:0001474!4.36e-26!86;UBERON:0002405!6.22e-25!115;UBERON:0004765!1.12e-20!101;UBERON:0001434!1.12e-20!101;UBERON:0003081!9.21e-14!216;UBERON:0002384!1.42e-10!375;UBERON:0002204!2.36e-09!167;UBERON:0000178!1.85e-08!15;UBERON:0000179!1.85e-08!15;UBERON:0000463!1.85e-08!15;UBERON:0002106!7.38e-08!3;UBERON:0004854!7.38e-08!3;UBERON:0009034!7.38e-08!3;UBERON:0002095!7.38e-08!3;UBERON:0004782!7.38e-08!3;UBERON:0003281!7.38e-08!3;UBERON:0009664!7.38e-08!3;UBERON:0002296!7.38e-08!3;UBERON:0005602!7.38e-08!3;UBERON:0001179!7.38e-08!3;UBERON:0006293!7.38e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.06e-09;3!UBERON:0000029;1.97e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.09e-19,98;UBERON:0003061,4.09e-19,98;UBERON:0002193,4.80e-19,108;UBERON:0002405,4.49e-18,93;UBERON:0002371,2.27e-15,76;UBERON:0001474,4.86e-14,82;UBERON:0004765,1.53e-12,90;UBERON:0001434,5.30e-11,100;UBERON:0002106,9.54e-10,3;UBERON:0004854,9.54e-10,3;UBERON:0009034,9.54e-10,3;UBERON:0002095,9.54e-10,3;UBERON:0004782,9.54e-10,3;UBERON:0003281,9.54e-10,3;UBERON:0009664,9.54e-10,3;UBERON:0002296,9.54e-10,3;UBERON:0005602,9.54e-10,3;UBERON:0001179,9.54e-10,3;UBERON:0006293,9.54e-10,3;UBERON:0002384,5.40e-08,371;UBERON:0000029,1.69e-07,1;UBERON:0003081,2.73e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52164238968239,2.29881650459848,1.33808328233255,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0.232401601740905,0.284338464974843,0,0,0,0.434021741431704,0.223915474239924,0.647787332037959,0,0.581592955118259,0.755751887377619,0.485168122375632,0.232429036905685,0.411167888021826,0.309706370895104,0,0.512321413058201,0.236482229888585,0.689491361473237,0,1.35426486594342,0.188242339542605,0,0.449446968890169,0.918251677112708,0.962787081228281,0.639337125799041,0,0,0,0.580418477257168,0,0,0.502497330513487,0,0.434377689410233,0.605399502633369,1.10483290796269,0.316462387440884,4.43636101255078,3.4016687994407,3.14487968262564,1.79725809834392,2.10247649978109,1.6072558669708,3.42015292489498,2.18808344918999,3.28795476776341,5.27988733383968,1.09227722252426,3.55803701545422,1.28019066769952,3.2031678962881,0.574752439954483,1.32208974556972,0.954053754535364,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.9472843619281,2.96020553408754,1.46253756570752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0.714695326373367,2.46817363851717,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,1.43944664511834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0.196308467114945,0,0,0,2.53756578545605,0.128915775947154,4.89711664032152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.673520530145875,0,0,0,0,0,0,0,0,0,0,0.805095174364105,1.60284246151616 | |||
|short_description=p3@SCIMP | |||
}} |
Revision as of 13:19, 20 January 2014
Short description: | p3@SCIMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCIMP_5end |
Coexpression cluster: | C780_Dendritic_CD14_CD14CD16_CD19_splenic_xeroderma_spleen |
Association with transcript: | -450bp_to_ENST00000399600_5end |
EntrezGene: | SCIMP |
HGNC: | 33504 |
UniProt: | Q6UWF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.09e-19 | 98 |
blood island | 4.09e-19 | 98 |
hemolymphoid system | 4.80e-19 | 108 |
immune system | 4.49e-18 | 93 |
bone marrow | 2.27e-15 | 76 |
bone element | 4.86e-14 | 82 |
skeletal element | 1.53e-12 | 90 |
skeletal system | 5.30e-11 | 100 |
spleen | 9.54e-10 | 3 |
gastrointestinal system mesentery | 9.54e-10 | 3 |
stomach region | 9.54e-10 | 3 |
mesentery | 9.54e-10 | 3 |
gastrointestinal system serosa | 9.54e-10 | 3 |
mesentery of stomach | 9.54e-10 | 3 |
gut mesentery | 9.54e-10 | 3 |
dorsal mesentery | 9.54e-10 | 3 |
dorsal mesogastrium | 9.54e-10 | 3 |
peritoneal cavity | 9.54e-10 | 3 |
spleen primordium | 9.54e-10 | 3 |
connective tissue | 5.40e-08 | 371 |
lymph node | 1.69e-07 | 1 |
lateral plate mesoderm | 2.73e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.58e-07 | 1 |
monogenic disease | 1.58e-07 | 1 |
xeroderma pigmentosum | 1.58e-07 | 1 |
anemia | 1.91e-07 | 1 |