FFCP PHASE1:Hg19::chr17:2304333..2304364,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7188 | |||
|TSSclassifier=strong | |||
|UniProt=Q99583 | |||
|association_with_transcript=0bp_to_ENST00000404961_5end | |||
|description=CAGE_peak_1_at_MNT_5end | |||
|id=chr17:2304333..2304364,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.48e-17!115;UBERON:0001049!1.48e-10!57;UBERON:0005068!1.48e-10!57;UBERON:0006241!1.48e-10!57;UBERON:0007135!1.48e-10!57;UBERON:0000073!2.65e-10!94;UBERON:0001016!2.65e-10!94;UBERON:0001950!2.78e-10!20;UBERON:0002619!4.85e-10!22;UBERON:0005743!6.51e-10!86;UBERON:0001017!9.01e-10!82;UBERON:0003080!1.06e-09!42;UBERON:0002780!2.02e-09!41;UBERON:0001890!2.02e-09!41;UBERON:0006240!2.02e-09!41;UBERON:0000955!2.93e-09!69;UBERON:0006238!2.93e-09!69;UBERON:0002346!8.20e-09!90;UBERON:0000924!1.14e-08!173;UBERON:0006601!1.14e-08!173;UBERON:0002616!1.17e-08!59;UBERON:0003075!1.51e-08!86;UBERON:0007284!1.51e-08!86;UBERON:0004121!2.21e-08!169;UBERON:0001893!2.80e-08!34;UBERON:0001869!3.18e-08!32;UBERON:0002791!6.19e-08!33;UBERON:0002020!6.75e-08!34;UBERON:0003528!6.75e-08!34;UBERON:0003056!1.45e-07!61;UBERON:0000956!3.22e-07!25;UBERON:0000203!3.22e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.98e-10;20!UBERON:0002619;5.67e-10;22!UBERON:0001869;2.11e-07;32!UBERON:0001893;2.58e-07;34!UBERON:0000956;3.06e-07;25!UBERON:0000203;3.06e-07;25!UBERON:0002780;5.61e-07;41!UBERON:0001890;5.61e-07;41!UBERON:0002791;6.23e-07;32!UBERON:0003528;8.11e-07;34!UBERON:0002020;8.11e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.78e-17,114;UBERON:0001950,2.78e-10,20;UBERON:0001049,2.79e-10,56;UBERON:0005068,2.79e-10,56;UBERON:0006241,2.79e-10,56;UBERON:0007135,2.79e-10,56;UBERON:0002619,4.85e-10,22;UBERON:0001016,6.69e-10,89;UBERON:0000073,7.94e-10,53;UBERON:0002616,7.94e-10,53;UBERON:0001017,1.61e-09,81;UBERON:0002780,2.02e-09,41;UBERON:0001890,2.02e-09,41;UBERON:0003080,2.02e-09,41;UBERON:0006240,2.02e-09,41;UBERON:0000955,5.27e-09,68;UBERON:0006238,5.27e-09,68;UBERON:0002346,9.03e-09,86;UBERON:0003075,1.65e-08,82;UBERON:0007284,1.65e-08,82;UBERON:0004121,2.23e-08,171;UBERON:0000924,2.23e-08,171;UBERON:0006601,2.23e-08,171;UBERON:0001893,2.80e-08,34;UBERON:0010371,2.98e-08,104;UBERON:0001869,3.18e-08,32;UBERON:0003528,6.75e-08,34;UBERON:0002020,6.75e-08,34;UBERON:0002791,1.15e-07,32;UBERON:0003056,1.78e-07,61;UBERON:0000956,3.22e-07,25;UBERON:0000203,3.22e-07,25 | |||
|phase1_expression=10.9007027562334,10.7050261945492,15.6459388546528,5.00366491765652,4.46961094427288,6.97870819280295,7.59899634504932,13.8978372153903,18.8053652303884,10.3208253330634,10.4670175195864,9.39297900159741,16.0897856719357,18.9362520028871,7.95353701746998,4.03395087871065,5.42425075221579,11.684961446198,9.27072317701963,8.125989833068,4.89601658986207,18.1803738457291,6.01095572975219,6.02247470320691,5.90050406095573,6.49513948857586,5.66494067204626,4.80135766013443,35.4027849164014,35.3123046249436,38.3943985823868,4.59710612239464,9.33738348212575,6.65557218300218,4.9579008371393,6.39761546193397,12.3312184520636,22.713811749807,28.8784004357004,31.0325545123668,11.1957737119962,15.87078963493,19.8333187078324,31.2606213376064,26.8291920019055,23.0454858128425,14.1781712512468,16.446715520873,9.60089749774821,7.76769459269806,8.96562472851852,4.7296445977717,13.7898272294647,12.2642089880927,9.47985406160392,19.9536879915161,20.4679612543384,5.8428105955722,7.95818120164347,10.5906578935111,8.95071976118658,17.482118909896,16.7549472402171,13.2129672665135,4.06292934080018,5.10646702222026,6.85104473895132,13.8186765891209,10.429658368404,5.2125322729228,10.2917915447673,7.73383035573886,2.53169909952708,20.9142733448822,22.9612643962247,17.820984868212,26.9588714751588,26.5813100329466,26.5197218050182,23.3710449867824,18.8970843339136,17.9010870689341,10.5597746676794,6.55366333514558,6.22656477704488,9.38806489646316,11.2110876370083,9.19603903927173,7.93253847341835,12.4026988089597,27.891435486363,25.8384363323213,34.7868637593958,10.5737062863221,6.1655941927969,6.58460211937693,41.3090517239049,46.7682807671506,42.1483072948994,15.7155305667237,29.9848485302903,29.8272117612882,19.4826728407911,9.13565746458423,22.0954430606128,20.6026521962768,17.873055008491,14.0900451698243,11.8354006279489,12.0039670360684,10.5013006758622,17.6779882298382,24.9121426112262,28.0917869494199,21.9524599990451,9.29136610120043,25.6757730713287,20.2740192834752,19.2294965934822,11.1497895013434,8.46408490013344,8.55406840003537,9.18508226374414,7.93516989157394,17.4903017173284,14.206635122641,16.4225599384209,33.4667193753056,32.6277038855879,41.4197795104805,19.5045493051169,18.1089232119982,8.69465420536006,4.69870898099936,11.0294340339896,17.6712753132205,13.5198610998687,16.5455855902896,9.35894689924272,9.53436409089025,9.57399164055074,20.5637148531409,22.9506031624302,13.3482399402395,9.41187441598582,8.35822739036483,9.1740992758017,20.0332124416487,13.1558829479429,7.05769252526173,8.74554592413502,9.46258054616737,11.4556365530506,12.4367747223282,5.87299210693868,10.4544855937226,11.076733226451,11.3703374034505,10.6729878806013,8.70273593188143,6.8480983908555,12.1643536914962,13.4234131651493,5.8826092855339,11.3419872703446,8.66207364355574,4.4905874525234,5.51796254368279,21.4643292452237,12.3404535743857,8.24407847686833,35.5807127077371,27.1446184903828,22.6768907114118,11.4303548889923,8.48424428152684,11.51959873075,8.3182620017156,13.4773985235376,10.0921968025615,20.2823091886439,14.3067178081953,14.3157076283892,9.29503637280848,5.39424280274414,13.319453632754,13.82822218752,11.481750159856,9.36480230490961,8.55707732316674,10.6108563191779,2.11382097558777,3.72307772046703,4.6348766211742,10.2077085627447,5.40470996171779,20.7684820163289,7.12801714369232,17.0614181202204,33.675970391707,25.8702531053846,5.55509176048418,7.88246675193374,9.97430815743058,9.65750765937843,8.88814607817157,17.4276148331652,6.12533789064114,8.61070251306537,8.96941033037983,8.9011398487016,8.10245959427886,9.2747276314595,11.5938243020533,10.2364270982374,12.3206722536124,6.13853132515551,5.55354303337052,10.0334389520106,6.46584227275248,9.23024940543197,5.44061330429257,11.5301202771132,8.69673839234836,9.81886034127005,8.89094245705912,6.95250124938694,4.77107165957347,7.78499417225773,6.73796857599908,7.0649838245176,5.83963774521328,6.25798129319264,15.4377825166292,17.9575397758225,20.8965567614391,5.0531563716871,3.07597680103594,3.20310911148393,3.13314338848527,3.19852520923942,3.05031221729369,2.37270619111097,1.48314438976181,3.13954344200554,1.92373578473195,7.38155454624648,15.426595118379,15.2282384192618,16.1709582524096,13.9430538304014,7.86261773342101,9.45263850690247,6.18048339180511,9.34712132927663,7.20584803253807,24.1450627898976,20.2323155863715,9.65078135151656,20.5546348251936,12.7065239071027,10.3993478527958,4.3299402607582,8.11512834825538,11.7408694235822,10.9718500298416,7.40776820122577,8.94194515502612,15.0138835612262,8.58486162094873,8.61759521305891,8.65815781015179,9.21513206190115,0.93733833986777,9.57498130733499,6.94697976487694,11.6426079513703,9.88155390947471,21.4694300332518,14.2872338989824,24.6535615237033,17.4155617054249,10.2325166926043,26.3846685861134,9.46118624953319,28.6491319168708,31.6487107467127,25.6608669034058,7.81488944545259,10.5120070245371,24.8668996388603,7.51278265113917,6.10344096366592,6.3070925806017,12.2808129969889,100.143804838527,5.071816515336,21.8069255599594,11.4408180602503,12.8603687131071,7.09245660116391,17.8502859940787,19.0160731565336,38.5261339827925,13.1718453884923,5.86325131728723,18.4803813346124,4.75171123760058,7.23454504943007,6.97226766880235,12.8965158624854,24.3247561282381,13.5609414686674,4.21667878966063,7.66799537573064,14.9320516584348,14.2636905040718,6.80472141337622,10.4792924500696,6.08807275015645,8.85472637548865,31.3278908721064,30.4034880551919,40.0430273192815,17.7866236955724,29.932166387253,16.2390650683316,14.908947614757,14.0346525363696,30.7092879818345,29.9161459204025,29.8379169673946,32.6359367972912,19.0064798002677,6.23909554509392,21.4209987376731,25.1584874203998,12.6161932027148,16.0483738540017,15.9501432855691,13.6444502433591,23.7988063972761,7.3064815838898,6.63729006750131,16.5947703634038,23.4961388955289,13.3825935286234,30.1881318139416,36.024271536709,40.2362892918985,6.97193414326397,6.65741758041988,14.5147340798247,11.6610669674825,10.5888761568763,5.89386198309454,13.9671672688714,4.09365799253363,9.32952742632923,7.42090332224955,5.70575867069826,7.99027763909072,13.3045992742371,10.3850885836724,8.25093687065711,7.97672367304707,9.02279116364782,20.8103034995126,10.21848588665,11.4717435844232,18.8819157541571,18.4991841292039,8.77974842990328,21.1774437677751,14.6139224653261,7.28306239360842,4.54933536283586,4.93271745301895,7.34114114747274,26.2186329573492,14.3601611898242,23.0777295973233,6.88165937221603,4.98645605357235,8.95499018888713,3.94667777962682,2.61435451024901,10.514455129772,15.0886737021865,10.737487023922,14.6318236539766,10.7136273837462,8.99353549134409,28.1390113618124,24.0522291033513,16.068392984416,12.7605348145601,7.24028500438829,11.2057682550075,4.54860689198951,14.1794723226121,16.9669531879647,6.98858344812027,15.4025421668856,8.42953068340988,21.9096676796221,14.0373983744043,14.5667204431992,5.11330104227014,8.18512101759664,11.8496335927302,23.4105520933827,15.9691809095107,22.6182577939519,20.756312539639,1.86062352764589,5.95453390975468,6.64396791909324,9.91277008403889,13.818480730812,19.6851934495603,26.0926663299268,11.7742296029885,8.45400550641579,12.0796293083864,9.42499218765492,20.8247956020516,12.6808256938407,5.05510147486777,24.8693206935691,10.2359665645139,8.45201174054043,9.14549406433505,11.0296236923896,19.2113798254413,27.5682671773062,14.5956574553068,7.89211593456773,18.520817096534,20.3327373134456,12.5804433716877,12.0831164258903,7.88747687090276,6.88374490579447,6.18968958382663,12.840157853325,15.9642478831769,21.3218711650641,6.58589785919804,17.4557659932229,17.4967360122491,11.9315419779635,17.4278591639305,9.80018863751903,12.7094131048652,22.8167847515752,11.7930032967338,31.0401107475673,14.4725742130384,9.64150457541122,9.94028369285088,18.2287099895732,16.4379925065874,16.0431286503616,3.8908398671563,9.18053443304795,18.2418790547682,5.44802762750113,3.84991942105343,21.5635390063308,2.41544127663434,9.95457569537469,11.6672623091399,2.8696729091188,8.98107171447675,8.23473091569177,6.77355464716425,6.16781686521655,10.6702927683114,10.9552645935932,8.14735458019721,12.5317238545034,10.3267984458978,11.4017533323627,7.87018858045086,9.7944634668775,11.679181721696,3.6868891717015,3.57881772627865,5.33917253478107,4.88470238505101,6.40334199959057,4.92349595790849,4.05683517713975,15.3213105278997,14.098700508785,14.5969621518411,27.2505213445723,8.98067860946399,3.67763168115679,8.80822055099881,17.4283473858514,7.42411702081597,7.6790175524808,28.8302817852226,19.5530488810613,14.6927490630236,3.13127361030843,9.07839254950372,29.4887022611583,13.8141957765574,6.04638594850262,8.69283801268316,8.12359716043058,11.1974251558251,8.44762500784872,15.3958210221024,8.18515792362995,40.049222688595,11.974154617347,25.5615077332665,21.3253204140948,34.2314282217231,31.9382076801911,19.011226559222,10.5826599995397,20.2999881121742,6.82760689712998,9.66163871112512,10.6374456795571,8.27384095779515,8.74813840149763,16.6679995135961,15.9433449446491,17.9688693551858,24.4130778107333,14.1541452711968,16.2551190424451,18.4283733609337,4.90223085835456,12.2692894965171,27.7790433198707,17.6610186562852,8.76142836674629,15.6178301273004,7.49666866261856,14.3550521879364,8.88496655998065,6.92945208824225,4.08773192782946,6.90713128138109,6.14983223030579,6.76786981851542,6.07793856384993,7.21632823996124,5.69261198172555,13.3506726343518,6.75193806489686,12.0792278037769,6.9263005002631,17.7438684588515,19.9052386215701,25.033490754445,36.6618086960175,10.3782395038218,9.26729542098771,8.45817790994189,20.1529387612224,4.01288823649394,11.713222286267,8.5753750931363,0.586993856796269,10.1967759404319,14.2050385025781,14.5188859258397,26.3222575002222,16.8708167608063,4.50970258243478,3.21433393331466,9.30515421790059,6.28884716163448,12.8712496546962,4.77889719091835,13.3766486634003,14.6995153393927,10.0664648234376,20.2844262647762,6.9647365264322,19.2199335066233,17.02661721469,6.57943052765779,3.58137653722309,5.50173562256502,29.8726170784332,32.2134862423976,16.2706133361983,8.0854735541583,8.14729907982258,23.9314808713221,15.0574564705798,31.8230516398589,23.9067354108075,15.1855303282419,9.22178669786278,9.62107407793692,12.5264348439234,12.8208770209453,12.052495949847,15.5558062847085,17.1239299652754,15.8996326394746,11.8317932458133,23.404997782023,13.2092463516154,13.6905378891993,14.052124687367,10.314370594079,4.46908502274835,11.1712960508902,14.6662671367478,12.2038414178058,11.5813820289415,8.58452096273142,6.02562935093056,18.1395375714161,10.4486966227297,8.15471646692177,9.76911460609573,9.80748714735881,9.70611031500262,6.98835118754716,6.18115324080227,11.9284453471395,17.4340359822817,6.43012593860077,7.42712957625062,9.55512777467126,9.89885122826602,27.0830684095282,27.7625473927173,14.7591262543677,14.5790558503517,21.9784724285642,29.4624938889144,12.729401092632,6.71703190618059,11.4351252219739,7.94510364438518,10.17074150619,14.6609892473502,2.5926644736038,5.55198512185996,11.9730191562487,11.9034155086541,10.7344453724816,10.1980882368113,12.0172831616028,11.9256200020999,21.848819625102,12.8265623690409,15.2267285717053,23.2588957364502,20.8235454507005,11.6331185773753,16.983801269235,19.846640872478,5.13790242934655,4.87170393523584,24.2569677952669,15.2324984943453,15.5427734294074,14.3982421078827,8.19681576774511,24.1863308225361,24.8099090390756,21.7206751525494,25.538949864126,18.3490942620823,14.9754219574751,19.436174120653,7.74752355642893,6.24902039810533,19.7143852804142,26.548276019682,11.2927593455122,6.55668868129634,9.70970891692529,6.71646612990933,9.34853239388898,5.54805861502613,9.09134425320428,7.54703705257725,14.2369795455446,8.92476266748002,14.2157068337445,7.61642282855624,3.69637874974085,3.82312241192886,17.092518262217,5.27894053379282,17.8323669371568,5.84851772027589,11.4783913598581,8.56468371284145,11.4241563650639,1.22061219961398,4.54621648006399,8.59284456339908,14.8490803161118,14.7295478818488,3.20022211730523,16.4829938487741,14.8169775057004,12.6184898228651,13.8686277893258,14.36758662212,9.91778309467804,4.98753036126999,12.2706911391632,13.2157820433492,11.4616858292152,10.808050650634,12.2799067764076,6.5374983999976,6.94490537775293,14.022222574205,9.48093618775403,10.0174799102048,10.0273785538536,22.3978666565804,13.4453613099178,10.3634575444423,7.0333119530013,7.53502652346749,11.5513267114248,9.72035767449684,9.19942020932677,5.65466167378947,8.43853400337997,8.51273930350254,15.6490057714065,9.09216800176389,18.6623178009892,25.706768632034,13.1546269903952,5.81883984866817,21.2958794474427,11.2023469769657,21.0449170900666,15.2440990038573,8.9383186875719,15.2642088313641,11.1195060451767,4.80342448971282,19.0445009592969,5.2061731150044,22.929833359436,31.1732467916287,18.1982599325152,28.3060582652242,27.2237431919456,29.9450903170063,21.4762608690362,17.1323304310985,8.93144238359333,12.8586998449037,22.0114318226015,14.9028109333936,14.1111375322852,30.3758367466444,8.15556510676726,27.6021905041774,7.66479261073376,13.2857381909626,12.5715213351083,12.7742095657875,20.2562838117352,22.4900156779254,21.8701867611877,23.7689815976362,24.7955817858176,24.6138664058199,16.9959907725727,14.3901241732895,13.89382830441,14.8204416061931,33.7492156603321,25.2212791664118,12.1393120847326,17.9853131167525,22.2642949108223,3.3417856391176,12.0041606606193,17.4002516420689,25.9802455573254,7.32801813480603,8.67604934758139,22.6845038337986,17.4398304806762,24.6639503716134,12.7842220871329,13.6034382467731,20.0655708912561,26.3033682570095,18.0135517375308,5.92831269377439,11.3007876996677,20.0427841182563,15.7484284763908,14.6817890300797,28.3416461343778,11.1859113293272,16.6848121030097,16.7870407375541,22.4395136601192,9.85159534739415,13.6490809692301,4.77769469488717,13.6463626793307,6.77236611945176,12.0698745732447,7.12171720906684,17.863328392987,8.11870101936739,10.6856418473011,4.67878926924211,26.8583546467847,13.4379702578652,14.3441524189479,18.689887846723,14.1905072952673,15.8207024121287,15.7362883562849,22.5752302253531,20.5924590273281,34.644452423939,24.1459414551383,20.793248022896,10.9890489171684,11.7249709134594,21.2403654634469,17.5970034167866,4.59729317254673,18.2125017377771,8.4694769211766,17.8135834049954,10.2247094354512,7.33966853447265,11.4671666521161,10.7284662291366,29.5762982330479,22.6902358976996,14.8127515344312,10.0438654905023,12.4787419730483,6.05677186973305,8.20081761428013,5.24474745425739,9.75578457788065,8.26109520910052,11.2231310211535,9.18948995348449,17.0481126718815,26.2194295835108,23.0449151934314,20.7292359864695,14.8943514041129,11.9411029864549,11.4270927102595,17.6327723852297,16.6980981455858,16.3712519367696,15.7208480947067,15.9672579276993,17.8527733275508,9.92476573147315,19.262687162172,17.1416070888496,13.9717349749326,13.5943458580327,11.633280700671,13.5150597600858,15.0906339539066,9.38563769613817,16.3803535205041,10.9861968145249,15.3124058062668,21.1337483270578,4.48795889224526 | |||
|short_description=p1@MNT | |||
}} |
Revision as of 13:06, 20 January 2014
Short description: | p1@MNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MNT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000404961_5end |
EntrezGene: | MNT |
HGNC: | 7188 |
UniProt: | Q99583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.78e-17 | 114 |
neocortex | 2.78e-10 | 20 |
neural tube | 2.79e-10 | 56 |
neural rod | 2.79e-10 | 56 |
future spinal cord | 2.79e-10 | 56 |
neural keel | 2.79e-10 | 56 |
regional part of cerebral cortex | 4.85e-10 | 22 |
nervous system | 6.69e-10 | 89 |
regional part of nervous system | 7.94e-10 | 53 |
regional part of brain | 7.94e-10 | 53 |
central nervous system | 1.61e-09 | 81 |
regional part of forebrain | 2.02e-09 | 41 |
forebrain | 2.02e-09 | 41 |
anterior neural tube | 2.02e-09 | 41 |
future forebrain | 2.02e-09 | 41 |
brain | 5.27e-09 | 68 |
future brain | 5.27e-09 | 68 |
neurectoderm | 9.03e-09 | 86 |
neural plate | 1.65e-08 | 82 |
presumptive neural plate | 1.65e-08 | 82 |
ectoderm-derived structure | 2.23e-08 | 171 |
ectoderm | 2.23e-08 | 171 |
presumptive ectoderm | 2.23e-08 | 171 |
telencephalon | 2.80e-08 | 34 |
ecto-epithelium | 2.98e-08 | 104 |
cerebral hemisphere | 3.18e-08 | 32 |
brain grey matter | 6.75e-08 | 34 |
gray matter | 6.75e-08 | 34 |
regional part of telencephalon | 1.15e-07 | 32 |
pre-chordal neural plate | 1.78e-07 | 61 |
cerebral cortex | 3.22e-07 | 25 |
pallium | 3.22e-07 | 25 |