FFCP PHASE1:Hg19::chr16:88770019..88770033,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115992 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28856 | |||
|TSSclassifier=strong | |||
|UniProt=Q96A37 | |||
|association_with_transcript=0bp_to_ENST00000541206,NM_001171816_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_RNF166_5end | |||
|id=chr16:88770019..88770033,- | |||
|ontology_enrichment_celltype=CL:0000037!1.46e-63!172;CL:0000566!1.46e-63!172;CL:0000988!1.53e-62!182;CL:0002032!4.93e-58!165;CL:0000837!4.93e-58!165;CL:0000738!2.17e-51!140;CL:0002031!5.84e-44!124;CL:0002087!2.77e-42!119;CL:0000763!1.04e-39!112;CL:0000049!1.04e-39!112;CL:0000766!5.71e-31!76;CL:0000839!4.93e-27!70;CL:0000557!7.71e-27!71;CL:0002194!1.37e-23!63;CL:0000576!1.37e-23!63;CL:0000040!1.37e-23!63;CL:0000559!1.37e-23!63;CL:0002009!1.96e-23!65;CL:0002057!2.95e-20!42;CL:0000084!1.90e-19!25;CL:0000827!1.90e-19!25;CL:0000860!5.88e-18!45;CL:0000791!1.18e-17!18;CL:0000789!1.18e-17!18;CL:0002420!1.18e-17!18;CL:0002419!1.18e-17!18;CL:0000790!1.18e-17!18;CL:0000838!4.33e-16!52;CL:0000542!1.62e-15!53;CL:0000051!1.62e-15!53;CL:0000625!8.52e-12!11;CL:0000134!1.49e-09!358;CL:0002320!2.07e-09!365;CL:0002393!1.19e-07!9;CL:0002397!1.19e-07!9;CL:0000219!4.26e-07!390;CL:0000624!7.96e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.32e-30;18!CL:0000789;3.32e-30;18!CL:0002419;3.32e-30;18!CL:0000084;1.95e-25;25!CL:0000625;7.43e-20;11!CL:0000624;6.24e-11;6!CL:0000763;9.54e-10;100!CL:0002393;2.86e-09;6!CL:0002397;2.86e-09;6!CL:0000766;9.76e-09;69!CL:0000576;1.03e-08;48!CL:0002087;1.20e-08;104!CL:0000738;3.31e-08;136!CL:0000542;4.31e-08;53!CL:0000988;6.95e-08;177!CL:0000094;1.34e-07;8!CL:0000473;4.91e-07;39!CL:0000234;4.91e-07;39!CL:0000623;7.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.86e-49,168;CL:0000988,9.81e-46,177;CL:0002032,1.84e-44,161;CL:0000837,1.84e-44,161;CL:0000738,1.51e-38,136;CL:0002087,1.15e-32,115;CL:0000791,1.82e-30,18;CL:0000789,1.82e-30,18;CL:0002420,1.82e-30,18;CL:0002419,1.82e-30,18;CL:0000790,1.82e-30,18;CL:0002031,1.03e-28,120;CL:0000763,1.31e-27,108;CL:0000049,1.31e-27,108;CL:0000084,1.32e-25,25;CL:0000827,1.32e-25,25;CL:0000766,5.83e-20,72;CL:0000625,6.40e-20,11;CL:0000838,1.98e-15,52;CL:0000542,5.41e-15,53;CL:0000051,5.41e-15,53;CL:0000557,6.93e-15,67;CL:0002194,2.80e-14,59;CL:0000576,2.80e-14,59;CL:0000040,2.80e-14,59;CL:0000559,2.80e-14,59;CL:0000839,3.74e-14,66;CL:0000473,4.79e-14,48;CL:0000234,4.79e-14,48;CL:0002009,1.46e-13,61;CL:0000860,1.15e-12,42;CL:0002057,1.15e-12,42;CL:0000134,1.22e-11,354;CL:0002320,5.11e-11,361;CL:0000624,5.14e-11,6;CL:0002393,3.97e-10,9;CL:0002397,3.97e-10,9;CL:0000219,7.29e-09,386;CL:0000094,1.11e-07,8;CL:0000623,7.04e-07,3;CL:0000825,7.04e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.32e-30;18!CL:0000049;2.34e-10;108!CL:0002057;2.02e-09;42!CL:0000051;4.31e-08;53 | |||
|ontology_enrichment_disease=DOID:1240!4.53e-12!39;DOID:8692!4.72e-10!31;DOID:2531!1.50e-08!51;DOID:0060083!1.50e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.95e-08;31!DOID:1240;8.84e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.65e-10,39;DOID:8692,6.67e-09,31;DOID:2531,2.68e-07,51;DOID:0060083,2.68e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.71e-35!102;UBERON:0003061!9.71e-35!102;UBERON:0002193!3.59e-34!112;UBERON:0002371!2.68e-22!80;UBERON:0001474!5.88e-20!86;UBERON:0002405!2.98e-17!115;UBERON:0004765!5.13e-14!101;UBERON:0001434!5.13e-14!101;UBERON:0007023!2.54e-11!115;UBERON:0000178!4.98e-11!15;UBERON:0000179!4.98e-11!15;UBERON:0000463!4.98e-11!15;UBERON:0003081!1.39e-09!216;UBERON:0002384!1.64e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.40e-15;15!UBERON:0000179;1.40e-15;15!UBERON:0000463;1.40e-15;15!UBERON:0002390;2.47e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.93e-26,98;UBERON:0003061,4.93e-26,98;UBERON:0002193,7.48e-25,108;UBERON:0000178,1.50e-15,15;UBERON:0000179,1.50e-15,15;UBERON:0000463,1.50e-15,15;UBERON:0002405,1.44e-14,93;UBERON:0002371,3.91e-12,76;UBERON:0001474,1.18e-10,82;UBERON:0002384,3.55e-10,371;UBERON:0004765,5.18e-09,90;UBERON:0001434,2.30e-07,100;UBERON:0003081,4.61e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.246301768349837,0.314843125254717,9.04737836752479,12.2825407391108,3.2511385896376,0,0,0,0,0,0.293600439334847,1.10799081706375,8.42286679374595,2.17010870715852,1.34349284543955,0.971680998056939,0.77272670290256,1.45398238779565,2.64513160582167,4.12392904019288,0.232429036905685,0.411167888021826,0.619412741790207,1.1507695692886,0.512321413058201,0.236482229888585,1.03423704220986,0,1.35426486594342,1.12945403725563,1.91034305040492,0.674170453335254,1.22433556948361,0.641858054152187,0.639337125799041,1.31940520074686,0.997318288108159,2.55734850319616,0.290209238628584,0,0,0.75374599577023,1.0429658368404,1.52032191293582,0.605399502633369,0.368277635987565,0.316462387440884,2.32380814943136,1.91343869968539,2.51590374610051,1.79725809834392,0.750884464207532,1.28580469357664,1.42506371870624,2.38700012638908,0.91332076882317,0,0.546138611262131,0.889509253863555,0.426730222566507,0,1.14950487990897,0,0,0.569212969109448,0.587237189370939,0,3.96513985737078,6.72610275577843,0.263384084775077,1.7703879310245,12.1833336452241,7.60725546298184,12.3718006589102,5.86660079940463,2.36723902867367,7.79306913631645,9.24706792146941,10.0166008541445,4.65221178625604,8.12411591295047,13.0653146120189,18.208308658383,3.94650971048823,9.119550586933,6.95527405764126,5.93146252648242,3.47803076516627,4.18142095219907,6.45863253376127,5.3650869104269,3.77990190030893,7.08455137654608,8.60126618675061,5.85975108470777,7.60361635558699,4.51725357233318,5.88738411310325,17.4903017173284,9.94464458584871,5.74789597844733,11.0883708773603,28.3486607530518,7.82051780967114,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.523916301990851,0,0,0.97364218096405,3.13433527138681,1.99436940778298,2.38490624305342,1.14398982156026,0.74291500265913,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,1.53316637465883,0,0.549605231791222,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97316789473185,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,1.47730203652438,2.10603838625314,0.743155811443641,0,0,0,0,0,0,0.985326475791887,5.10680917276711,1.03664057770386,0.432359860250884,0.75745460055828,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,0.502257091432126,0,0,0,0,0,0,0,1.90544744788996,13.595122453933,23.0721505099684,6.54549485026717,0,0,0,0,0,0.749007023947182,2.99161459204025,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0.343143423810856,7.65041696654683,7.98142543028882,7.25747393063422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,2.02979043692868,4.58782324285425,8.54470780761244,5.95579438644473,6.17043409629291,5.18778648954174,3.7802200606668,7.13812658664843,0,0,0,0,0,0.782560276832555,7.174182272797,0.798317485731266,0.191505370132367,3.38677732358213,1.29848776109822,4.49275484981534,3.19528550646469,1.56679895773023,2.50634477090067,0.338583555603207,2.24823305145179,1.00899853595524,1.27753871307098,3.77855879231341,0.307240764308458,0.671028323677248,0.667396566847634,2.73543333562856,0,1.23087398947712,2.97501246323581,0,2.81974010175699,0,0.146508179271894,0,0.111443384277478,0,0,0.296964680832639,0,0,0.844016498463076,0,0,0,0.19924798825107,3.03912307084262,0,0,0,0,0,0,0,0.197286811273867,7.18449277040819,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,6.13159789174419,0.941881538370149,1.49590513710141,0,0,0,0,1.90723894776454,0,0,0,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0.123563938946503,0,0.539209063845416,0,0.234264445725339,0,0,0,0.394584402849391,3.62972148145992,0.30607276163049,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,1.27746588066972,0,0.788662062837943,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0,0.77380195455795,0.182248669974074,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0.13223260174269,0,0,0.533937062838473,0,1.65695622138878,4.46549419630756,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.554645257684261,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.265729680626726,0,0,0,0,0.59996218756479,0.640150378164845,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.317079050969534,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0.0887023701626388,0.115233987555779,0,0.135939465953663,0.131545547125698,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.860454717640555,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.297046400327086,0,0,0.563903507879121,1.35361564744512,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0.271965960763659,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0.517164979309476,0.213233981900981,0.23806443146374,1.42095601639213,1.67601728598816,0,0,0.202117188958219,0,0,2.1552656964668,0,0,0,0,0,0,0,0.244482888365733,0,0,2.81783311027437,1.28227396921293 | |||
|short_description=p3@RNF166 | |||
}} |
Revision as of 12:46, 20 January 2014
Short description: | p3@RNF166 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RNF166_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000541206, NM_001171816_5end |
EntrezGene: | RNF166 |
HGNC: | 28856 |
UniProt: | Q96A37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.93e-26 | 98 |
blood island | 4.93e-26 | 98 |
hemolymphoid system | 7.48e-25 | 108 |
blood | 1.50e-15 | 15 |
haemolymphatic fluid | 1.50e-15 | 15 |
organism substance | 1.50e-15 | 15 |
immune system | 1.44e-14 | 93 |
bone marrow | 3.91e-12 | 76 |
bone element | 1.18e-10 | 82 |
connective tissue | 3.55e-10 | 371 |
skeletal element | 5.18e-09 | 90 |
skeletal system | 2.30e-07 | 100 |
lateral plate mesoderm | 4.61e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.65e-10 | 39 |
myeloid leukemia | 6.67e-09 | 31 |
hematologic cancer | 2.68e-07 | 51 |
immune system cancer | 2.68e-07 | 51 |