FFCP PHASE1:Hg19::chr16:87872354..87872372,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C570 | |||
|description=CAGE_peak_at_chr16:87872354..87872372,- | |||
|id=chr16:87872354..87872372,- | |||
|ontology_enrichment_celltype=CL:0000066!4.56e-21!254;CL:0000223!1.86e-10!59;CL:0002076!4.56e-10!43;CL:0002077!1.07e-08!33;CL:0000063!1.78e-08!578;CL:0000548!1.79e-07!679;CL:0000004!1.79e-07!679;CL:0000255!1.79e-07!679;CL:0000710!2.83e-07!20;CL:0000012!4.49e-07!682;CL:0000075!5.03e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.96e-15;13!CL:0002077;1.99e-11;34!CL:0002567;1.31e-10;3!CL:0002328;1.92e-10;3!CL:0002202;7.25e-09;9!CL:0002632;7.25e-09;9!CL:0002076;5.63e-08;42!CL:0000148;8.94e-08;10!CL:0002159;1.48e-07;14!CL:0000575;5.27e-07;2!CL:0000710;9.63e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.94e-19,253;CL:0002368,3.20e-15,13;CL:0002077,2.10e-12,34;CL:0002076,4.21e-12,42;CL:0002328,1.26e-10,3;CL:0002567,2.04e-10,3;CL:0000223,2.06e-10,58;CL:0002202,6.11e-09,9;CL:0002632,6.11e-09,9;CL:0002321,7.93e-08,250;CL:0002159,1.50e-07,14;CL:0000148,1.83e-07,10;CL:0000541,1.83e-07,10;CL:0000575,4.85e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.03e-12!235;DOID:14566!4.76e-12!239;DOID:305!8.53e-10!106;DOID:0050687!1.00e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1909;5.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.61e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.92e-10;3!UBERON:0002031;1.92e-10;3!UBERON:0001003;2.41e-09;15!UBERON:0007376;2.41e-09;15!UBERON:0000065;1.93e-07;44!UBERON:0004909;5.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.26e-10,3;UBERON:0002031,1.26e-10,3;UBERON:0001003,1.13e-09,15;UBERON:0007376,1.13e-09,15;UBERON:0007383,1.13e-09,15;UBERON:0004909,3.78e-07,2 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,2.75826367343678,1.50602959389125,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0.822335776043652,0.309706370895104,0,0,0.236482229888585,1.03423704220986,0,0,0.188242339542605,1.63743690034707,0,0.306083892370903,0.641858054152187,1.27867425159808,0,0,0,1.16083695451434,0,0,0,0,0,1.81619850790011,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0,0.255725123687061,0,0,0.579386075843295,0,0,0,0,0.527008714158756,0,1.09288586487763,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0.496971951695318,0.759783069987479,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.49333509683432,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0.448346041655403,0.469737994575059,0,0.280901613404497,0,0,0.103325781175765,0,0.741800787835671,0,0.718618141816238,0,0,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.538168907066586,0.213557388818567,0,0.300091096084402,0.515262646192195,0,0.18611685633159,0.337552664482532,0.292311015483596,0,0.184099797284599,0,0.710019185033229,0.302256294682921,0,0.773043412653187,0.545492241181669,0.573609190778008,0.121973706129595,0,0.580969714347592,0.10366105501537,0.252320850875628,0,0,1.92972281457866,0,0,0,2.12952240071719,1.51726221070292,0.723033089650446,1.32352767278873,0.871517776369625,0.474541238222193,0.943819157121151,0.392442930250692,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,1.64625428112938,1.1240175325762,2.11110842064425,0.277765335475589,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,1.25381931783988,0.871901815541886,1.91691339582606,0.985326475791887,0.264145302039678,0,0.144119953416961,0,0.825472625798197,3.81988425558278,1.17217447210047,3.4214489204541,1.02827492703324,1.20137223137567,0.857479297891735,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0.410952645100767,0,0.224170287987055,0.197030760201927,0.862510299438069,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0.106727557803444,1.21251028578504,6.65741758041988,0.907170879989041,0.248107807818777,0,0.280660094433074,0.768834895534206,0,0.64341568457443,0,0,0.710246901252508,0.0821271560138091,0,0,0.725156697549733,4.41114234667227,7.27439812593581,0.68888668898764,0.546273504020151,0.262248829918848,0.451199612907412,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0.522870902049801,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.165018999841176,0.574265537996172,8.45078319847478,1.6068392984416,0.773365746336976,0.154048617114644,0.460511024178389,0.551346289938122,0.107420244868274,0.145016693914229,0.170453254832202,0.178064071293475,3.63626813794152,2.30628080838127,0.382838137483752,3.0347334256665,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.848432591722276,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0,0.196498082026242,0,0,0.422215270595328,0,0,1.39973888097993,0.962221127255121,1.34060455107157,4.3556393944529,0,0.86101074534246,1.68471475667626,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.557409525377156,0,0.284567373393656,0.318852545457645,0,0,0.423347165447766,0,0,0.228234679033192,0.156679895773023,0,0.338583555603207,0.1605880751037,0.201799707191048,0,0,0,0,0,0.781552381608161,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.111443384277478,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0.329607748453519,0,0,0,0.251932747854276,0,0,0.933118762985422,0.179736702294654,0.537063524026827,0,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,1.5625665665114,0,0,1.0241410345695,0,1.18193840883968,0.344743373241465,0,0,0,0,0,0.221158519862449,0,0,1.0893846351899,0.557694977114413,0,0.113942055847001,0.46112780877612,1.43612231055635,0.325942115766024,0,0.366390373607449,0,2.04386596391473,0.156980256395025,0.166211681900156,0.225595660617181,0.19606253431774,0.167821586975843,0.189753732724185,0,2.10998064528027,0,0.141353071433941,0,0,0,0,0.296521128680622,0.123563938946503,0.208843899010911,0,0,0,0.547364367646998,0.391329237864179,0.242780379534093,0,1.20990716048664,0,0,0.150323419414493,0,0,0.992975867626496,0,0,0,0.693373365065693,1.73559738335131,0.48996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| |||
|short_description=p@chr16:87872354..87872372,- | |||
}} |
Revision as of 12:42, 20 January 2014
Short description: | p@chr16:87872354..87872372, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr16:87872354..87872372, - |
Coexpression cluster: | C570_oral_Prostate_Esophageal_Mammary_Corneal_Keratinocyte_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.94e-19 | 253 |
respiratory epithelial cell | 3.20e-15 | 13 |
ecto-epithelial cell | 2.10e-12 | 34 |
endo-epithelial cell | 4.21e-12 | 42 |
bronchial epithelial cell | 1.26e-10 | 3 |
light melanocyte | 2.04e-10 | 3 |
endodermal cell | 2.06e-10 | 58 |
epithelial cell of tracheobronchial tree | 6.11e-09 | 9 |
epithelial cell of lower respiratory tract | 6.11e-09 | 9 |
embryonic cell | 7.93e-08 | 250 |
general ecto-epithelial cell | 1.50e-07 | 14 |
melanocyte | 1.83e-07 | 10 |
melanoblast | 1.83e-07 | 10 |
corneal epithelial cell | 4.85e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.26e-10 | 3 |
epithelium of bronchus | 1.26e-10 | 3 |
skin epidermis | 1.13e-09 | 15 |
outer epithelium | 1.13e-09 | 15 |
enveloping layer of ectoderm | 1.13e-09 | 15 |
epithelium of gonad | 3.78e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.61e-07 | 2 |