FFCP PHASE1:Hg19::chr16:81253986..81254016,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=114780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21715 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z442 | |||
|association_with_transcript=-11bp_to_ENST00000337114,ENST00000525539,NM_001076780,NM_052892,uc002fgh.1,uc002fgj.2_5end | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_10_at_PKD1L2_5end | |||
|id=chr16:81253986..81254016,- | |||
|ontology_enrichment_celltype=CL:0000242!5.48e-18!2;CL:0000095!5.16e-08!17;CL:0000123!5.16e-08!17;CL:0000312!5.35e-08!5;CL:0000240!7.17e-07!6;CL:0000311!7.17e-07!6;CL:0000079!7.17e-07!6;CL:0000237!7.17e-07!6;CL:0000036!7.17e-07!6;CL:0000357!7.17e-07!6;CL:0000114!7.17e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.55e-98;2!CL:0000242;1.55e-98;2!CL:0000312;1.48e-40;5!CL:0000240;4.27e-34;6!CL:0000311;4.27e-34;6!CL:0000079;4.27e-34;6!CL:0000237;4.27e-34;6!CL:0000362;2.62e-23;9!CL:0002159;1.43e-15;14!CL:0000095;6.95e-12;17!CL:0002319;8.32e-09;25!CL:0002077;4.53e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.55e-98,2;CL:0000312,1.48e-40,5;CL:0000240,4.27e-34,6;CL:0000311,4.27e-34,6;CL:0000079,4.27e-34,6;CL:0000237,4.27e-34,6;CL:0000036,4.27e-34,6;CL:0000357,4.27e-34,6;CL:0000114,4.27e-34,6;CL:0000362,2.62e-23,9;CL:0002159,1.43e-15,14;CL:0000095,6.95e-12,17;CL:0000123,6.95e-12,17;CL:0002319,8.32e-09,25;CL:0002077,2.74e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;4.27e-34;6!CL:0000114;4.27e-34;6 | |||
|ontology_enrichment_disease=DOID:4362!6.13e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!2.59e-12!3;UBERON:0005174!6.55e-08!5;UBERON:0001137!6.55e-08!5;UBERON:0000002!8.02e-07!6;UBERON:0001560!8.02e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.22e-14;15!UBERON:0007376;1.22e-14;15!UBERON:0010371;2.32e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.22e-14,15;UBERON:0007376,1.22e-14,15;UBERON:0007383,1.22e-14,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511343412510774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8690771458119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@PKD1L2 | |||
}} |
Revision as of 12:25, 20 January 2014
Short description: | p10@PKD1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_PKD1L2_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | -11bp_to_ENST00000337114, ENST00000525539, NM_001076780, NM_052892, uc002fgh.1, uc002fgj.2_5end |
EntrezGene: | PKD1L2 |
HGNC: | 21715 |
UniProt: | Q7Z442 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.55e-98 | 2 |
keratinocyte | 1.48e-40 | 5 |
stratified squamous epithelial cell | 4.27e-34 | 6 |
keratin accumulating cell | 4.27e-34 | 6 |
stratified epithelial cell | 4.27e-34 | 6 |
keratinizing barrier epithelial cell | 4.27e-34 | 6 |
epithelial fate stem cell | 4.27e-34 | 6 |
stratified epithelial stem cell | 4.27e-34 | 6 |
surface ectodermal cell | 4.27e-34 | 6 |
epidermal cell | 2.62e-23 | 9 |
general ecto-epithelial cell | 1.43e-15 | 14 |
neuron associated cell | 6.95e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 6.95e-12 | 17 |
neural cell | 8.32e-09 | 25 |
ecto-epithelial cell | 2.74e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.22e-14 | 15 |
outer epithelium | 1.22e-14 | 15 |
enveloping layer of ectoderm | 1.22e-14 | 15 |