FFCP PHASE1:Hg19::chr16:75150665..75150699,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=197257 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19708 | |||
|TSSclassifier=strong | |||
|UniProt=Q86WU2 | |||
|association_with_transcript=0bp_to_ENST00000300051,ENST00000450168,NM_153486,NM_194436,uc002fdm.2,uc002fdn.2_5end | |||
|coexpression_cluster_id=C1570 | |||
|description=CAGE_peak_1_at_LDHD_5end | |||
|id=chr16:75150665..75150699,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.59e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.31e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.70e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.54e-36!115;UBERON:0001049!2.10e-19!57;UBERON:0005068!2.10e-19!57;UBERON:0006241!2.10e-19!57;UBERON:0007135!2.10e-19!57;UBERON:0002616!1.95e-18!59;UBERON:0003075!2.18e-17!86;UBERON:0007284!2.18e-17!86;UBERON:0005743!2.82e-17!86;UBERON:0000955!4.82e-17!69;UBERON:0006238!4.82e-17!69;UBERON:0001017!1.13e-16!82;UBERON:0002346!8.76e-16!90;UBERON:0000073!1.14e-15!94;UBERON:0001016!1.14e-15!94;UBERON:0003080!5.22e-15!42;UBERON:0002780!8.17e-15!41;UBERON:0001890!8.17e-15!41;UBERON:0006240!8.17e-15!41;UBERON:0000033!8.42e-13!123;UBERON:0000153!8.47e-13!129;UBERON:0007811!8.47e-13!129;UBERON:0000468!1.06e-12!659;UBERON:0000062!1.15e-12!511;UBERON:0003056!4.31e-12!61;UBERON:0001893!8.97e-12!34;UBERON:0002020!1.26e-11!34;UBERON:0003528!1.26e-11!34;UBERON:0002791!2.98e-11!33;UBERON:0000475!3.54e-11!365;UBERON:0001869!7.17e-11!32;UBERON:0000922!1.45e-09!612;UBERON:0000481!2.14e-09!347;UBERON:0002619!5.06e-09!22;UBERON:0004121!5.38e-09!169;UBERON:0000467!1.45e-08!625;UBERON:0000480!2.31e-08!626;UBERON:0000924!2.43e-08!173;UBERON:0006601!2.43e-08!173;UBERON:0001950!2.96e-08!20;UBERON:0000956!7.29e-08!25;UBERON:0000203!7.29e-08!25;UBERON:0002050!9.29e-08!605;UBERON:0005423!9.29e-08!605;UBERON:0000923!1.19e-07!604;UBERON:0005291!1.19e-07!604;UBERON:0006598!1.19e-07!604;UBERON:0002532!1.19e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.34e-13;41!UBERON:0001890;1.34e-13;41!UBERON:0000073;2.00e-13;53!UBERON:0002616;2.00e-13;53!UBERON:0001893;1.33e-12;34!UBERON:0003528;1.59e-12;34!UBERON:0002020;1.59e-12;34!UBERON:0007023;3.20e-12;114!UBERON:0001869;4.57e-12;32!UBERON:0002791;6.90e-12;32!UBERON:0002619;2.33e-11;22!UBERON:0001950;2.65e-10;20!UBERON:0000956;3.02e-09;25!UBERON:0000203;3.02e-09;25!UBERON:0000955;8.78e-09;68!UBERON:0001017;1.01e-08;75!UBERON:0000125;2.96e-07;9!UBERON:0002308;2.96e-07;9!UBERON:0002420;4.66e-07;9!UBERON:0007245;4.66e-07;9!UBERON:0010009;4.66e-07;9!UBERON:0010011;4.66e-07;9!UBERON:0000454;4.66e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.17e-48,114;UBERON:0001049,1.06e-24,56;UBERON:0005068,1.06e-24,56;UBERON:0006241,1.06e-24,56;UBERON:0007135,1.06e-24,56;UBERON:0000073,5.05e-23,53;UBERON:0002616,5.05e-23,53;UBERON:0002780,3.15e-19,41;UBERON:0001890,3.15e-19,41;UBERON:0003080,3.15e-19,41;UBERON:0006240,3.15e-19,41;UBERON:0001017,1.04e-18,81;UBERON:0000955,2.32e-18,68;UBERON:0006238,2.32e-18,68;UBERON:0003075,3.86e-18,82;UBERON:0007284,3.86e-18,82;UBERON:0002346,2.08e-16,86;UBERON:0001016,2.34e-16,89;UBERON:0001893,7.09e-15,34;UBERON:0003528,1.13e-14,34;UBERON:0002020,1.13e-14,34;UBERON:0010371,2.53e-14,104;UBERON:0001869,1.36e-13,32;UBERON:0011216,1.82e-13,223;UBERON:0002791,2.13e-13,32;UBERON:0003056,8.71e-13,61;UBERON:0010314,9.90e-13,132;UBERON:0002619,1.76e-11,22;UBERON:0001950,2.24e-10,20;UBERON:0000956,2.38e-09,25;UBERON:0000203,2.38e-09,25;UBERON:0004121,1.05e-08,171;UBERON:0000924,1.05e-08,171;UBERON:0006601,1.05e-08,171;UBERON:0000025,5.72e-08,192;UBERON:0000125,3.26e-07,9;UBERON:0002308,3.26e-07,9;UBERON:0002420,4.21e-07,9;UBERON:0007245,4.21e-07,9;UBERON:0010009,4.21e-07,9;UBERON:0010011,4.21e-07,9;UBERON:0000454,4.21e-07,9;UBERON:0004111,6.08e-07,240 | |||
|phase1_expression=1.2717486548939,9.42042305120326,1.40954404095971,1.0007329835313,2.68176656656373,1.74467704820074,15.1979926900986,0.631719873426831,5.48489819219661,0.245733936501509,0,0,0.263766978228454,1.98026164736075,0.331397375727916,0.672325146451775,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0.401088894940283,0.651032612147555,2.68698569087909,3.2389366601898,2.06060454107349,0.436194716338694,0,0.242584061187816,0.697287110717054,0.411167888021826,0,1.43846196161075,0.256160706529101,0.47296445977717,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0.612167784741805,0,0,0.329851300186716,0,0,0.580418477257168,0.56738522469114,0,0.75374599577023,0,0.65156653411535,0.605399502633369,0,0.316462387440884,1.69004229049553,0.850417199860174,1.88692780957538,1.34794357375794,0.901061357049038,0.64290234678832,0.570025487482497,1.59133341759272,1.64397738388171,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.260118695119756,0.328875809207352,0,0.579606171470105,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.383587685530591,0.361439152384566,0.50133791063589,0.869079113764942,0,0.973269740605272,0.472674085820339,0.443458794925128,0.087834785693126,8.38266083185361,0.728590576585084,0.370784442784429,6.81549526674835,8.35822739036483,7.17972986801872,0,0,0,0.198762407366705,0.860234595106124,0,0,0.838998872419812,0,0,0.516833518338658,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0.662045904066094,0.860509862246441,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0,1.05950199351452,0.576175924479999,0.468642863667593,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0,0.408308342509787,0.122834317311768,1.03325781175765,0,0.494533858557114,0.910161361938026,2.15585442544872,1.17835279767846,0.125118519871964,0,0,0,0.300476117813194,0.567160915800105,0.717558542755448,0.427114777637135,0.211931901159562,0.300091096084402,0.206105058476878,2.31876486041066,0.37223371266318,0.675105328965065,0.194874010322397,1.51460264546469,0.736399189138395,0.161646056818812,0.710019185033229,0.201504196455281,0.169560592310488,0.193260853163297,0.818238361772504,0,7.68434348616451,5.30119073285941,4.88014560051977,2.798848485415,6.81266297364197,4.01475094983413,4.69348596989448,5.14592750554308,0,0.464367928031979,2.88751792667834,0.236613600079688,0.505754070234305,0.723033089650446,0,1.52515610864684,0,0.269662616320329,0.392442930250692,0.769494313892781,0,0,1.2347220339942,0,45.6318125358591,20.6393715502301,28.9487054273888,0,6.51838724278502,0.686271241194102,0.439001141634502,1.1240175325762,0.402115889646523,0.370353780634118,0,5.19967392639789,0,0.695582429850461,0.821860859650752,0.288732895522148,0,0.570762456703795,3.1608175918371,3.43394464837949,1.72351904261178,7.72214074959484,4.45893486866185,0.93733833986777,0.839910640994298,0.283550194484773,0.0895585227028483,0,0,0.492663237895943,2.99364675644969,0.414656231081544,1.15295962733569,1.13618190083742,0.444485260045183,0.763976851116555,4.68869788840188,5.13217338068116,1.02827492703324,3.30377363628309,0.285826432630578,0.112131084345361,0,0,0.646358578788889,17.8828222925941,0,0,0,0,0,0,1.00084595560703,1.08524321078289,0,0,1.77695974371273,1.58390374586686,0,0,0.099972991182057,3.64871341923571,1.50677127429638,4.21667878966063,0.718874566474748,0,0,1.01346914667305,0.410952645100767,0.179060963239896,0.560425719967636,0,0,0.256686072559497,0.508189248444927,0,0,0,0,0,2.99161459204025,0,0.36807447515742,0.500170521059677,1.62759014219841,0.415941723061614,0.178428988797162,0.157702415033935,1.28855556491985,0.902838299183157,0,1.03473071292505,0,0,0.434418072340414,2.93701736194111,1.37257369524342,0.620304078368662,0.215714200818617,0.213455115606889,0,0,0,0.496215615637554,1.2276957863045,0.280660094433074,0.256278298511402,0,0.482561763430822,0,0,0.355123450626254,0.0821271560138091,0,0,1.0877350463246,0,0.0920809889358963,0.114814448164607,0.182091168006717,0.393373244878272,0,0.308061348417659,0.784349769176855,0,0.316654886678627,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0.831076008928724,0,0.438519753291869,0.261435451024901,1.53870075069834,0.984043937099117,0.325378394664303,14.7348646656243,0,0,0,0.650060246036521,0,0.096670718292122,0.308097234229289,0.307007349452259,0,2.25582514223375,1.88521702088497,0,0.267096106940212,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0.94443704049192,0.6970372701606,0.616067160352178,1.59691809095107,0,0.74129687641568,0.286249773483982,1.116475108079,0.632758849437452,1.14378116354295,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,0.719489830333259,1.09814811894422,0.471249609382746,0.404364963146632,0,1.26377536871694,0.975267478179181,0,0,0,0.282810863907425,1.13008116620243,2.75682671773062,1.32687795048244,0,0.578775534266688,1.9676842561399,0.811641507850816,0.6196469961995,0.281695602532241,0.286822704408103,0.589494246078727,1.07001315444375,0,0.844430541190656,0.658589785919804,0,2.0996083214699,0.192444225451024,0,1.08890984861323,12.5211255033116,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.854592569019785,1.92495971052672,0,0,0,0,0.159426272728822,0,0.191505370132367,0,3.57084134302011,0.280797178113459,0.228234679033192,0,0,3.04725200042886,0,0.403599414382095,6.81353980304522,0.343505344755765,3.99412993600995,2.23676107892416,4.33807768450962,1.36771666781428,0.835218521685727,0,0.540911356951966,0.99921590399346,0,2.99424864653152,3.51619630252546,0.606802608747567,1.11443384277478,0,0.23874448473769,0,0,2.98244294329889,6.04878490565205,0.556543525114529,0,0,1.9924798825107,1.93398740871803,0.503865495708552,0.20453736500431,0,1.24415835064723,0,0,0.511572370226872,1.28236427328014,0,0,15.5093239375235,7.51421595110995,0,0.260427761085233,1.48681999993533,1.44999915086959,0.227586896570999,0.254253650292766,3.30942754475111,0.344743373241465,0.583209226766509,0,2.65722415744152,4.94445398364173,1.52581736317083,5.86070077635491,5.31985714116385,7.45910350323507,0.653630781113941,0,5.2326175782582,0,1.61394733071642,4.75715515371792,0.54323685961004,0,0,0,0,0.941881538370149,0.166211681900156,0.676786981851542,0.392125068635479,0.335643173951685,0,0,0,0.163232808159148,2.12029607150911,7.14082511148901,4.97630965539252,4.42287822516696,1.22206028986725,0,0,0,7.21192122893244,9.63093176758547,6.79366892603483,0,2.73930466504926,1.69946265673865,4.73501283419269,6.04953580243319,0.30607276163049,0.821425535170343,0.150323419414493,0.103688191397247,0,1.65495977937749,0.627865836814451,1.19472429772959,0.284609546029793,2.35746944122336,6.59527005673497,1.17590876897253,0.0870592065804026,3.31980669659857,1.20390222730132,0,0.0730893170861856,0,4.17052770900203,2.47117154736201,4.06765333404958,0.137041924646751,0.596143835108969,7.7239171066172,0.195551382734803,0.64127056201227,2.98834192635094,0,2.16135625731159,0.572682980829578,0.514784993585894,0,2.36079817574322,0,0.407712618220842,0.836822770498666,0.305994652908965,0.288950589901519,6.60462317580768,3.14882371451584,0,0.429765441419957,0,5.86493042671734,10.9997003525608,0.717873024576814,11.7810610294405,23.1782065993748,20.7549455420941,11.28682337777,0.360299883542404,1.16495949527454,2.36349546921671,2.96697090172199,2.15691340333392,0,0.0846733320657845,1.59045937961861,8.30840777280611,1.92903778158023,1.92555211236127,1.66176135211674,0.2249738915515,0,8.20119014883333,1.0063040627978,7.72295931532142,5.5601863423098,0.211200673038813,0.896436696664224,0.383830394638891,8.5763439164804,13.9039313776741,0.5085370753095,0,0,0,0,0,0.511164065356265,0.226624183040251,25.9397453610206,5.30027555648885,5.17131825446202,5.15707146796491,2.56630256826494,0,2.66968531419237,2.04365596629566,1.65695622138878,0.992332043623902,0,0,0,19.5846409213011,8.0220766087264,8.27133057261346,18.0329946890392,0.628216385000937,9.74674997963685,6.9554970994119,6.25954653532499,5.73409195690071,5.87923973145317,8.07253238237985,0.968440444553616,0.124980407962107,0.758245587708239,0,0,0,0,1.19403842309499,0.233713309847224,0.554805861502613,0.568209015825267,0.251567901752575,0,0.228840068396924,0,0,0,0.318593534327405,0,0.465788870628778,1.65882483136342,0.265841714557995,0.521745061811734,0.901545653983311,1.14241563650639,0,0,0.751873899297419,0.464033759878494,0.398095888698616,0,0,1.01024846629776,0,0.192619830407303,0.214441591374926,0,0,0.231522474323834,0,0.358177682162975,0,0.657852148736121,0.176689145945881,0,0.337884881306145,0,0,0,5.53033744606923,0.194860308839388,1.86010776438708,1.63565394255844,0.327609848846413,0.245772908753719,0,0,0.640150378164845,1.54993481694734,0,0,0,0.622077260032973,0.127894371303652,0,1.72992536041486,0,0.678930119816101,0,0.123935764259002,0,0.954013051960256,0,1.60114149657094,0.705351887381368,0.3062454773532,7.4505901111893,0,2.87340946302872,3.89721092057435,0.504143392443436,9.19791457774098,11.6262464854933,1.42769420259154,0.490738592505128,0,0,0,0.381382095467167,0,1.19349733269765,5.86640561124207,0.20170506870352,3.90757005616546,0.261906694481422,0.327543835020193,0.147856086217045,7.15898396954983,5.46754669029693,5.37385670903079,7.60989722326882,0.546974809018219,12.6099286377152,5.45832296228224,0,0.511049710558381,2.67850917939143,2.69026977775059,6.06965604236632,3.64259506162076,1.33053555243958,0.115233987555779,0,9.78764154866377,8.02427837466759,0.590969204419841,1.11231401892069,3.21821680687107,3.77077415798405,0.280272163313789,0,0.215927591218621,0,5.50369390160254,0.47404083519818,1.04617282831313,0,0,0.207216164163037,0.6828739083758,0,11.1859113293272,0.473328002922261,0.766920642832419,4.23387050190929,0.22910686854405,0.62041277132864,0,4.02679554472052,0.785201868921944,0.487671699929078,8.41657488344263,10.1636178787685,3.4794432940146,1.94284397223656,0,0,6.064924629656,0,0.329821550236287,0.301925687133347,1.15761237161917,0.437119121007915,0,0.980593287015622,0.942706188406504,4.51509474364374,4.1586496045792,2.113278637917,0.509781344063451,0.375935671919414,0.322289439867886,0,0.178553938605658,0,0.240724100067505,2.92134555298607,10.5507735183044,3.44014999563483,0.946629373159108,11.2185958815009,0.872701380680755,1.0580536810308,0.743990036333503,1.84870251452567,1.29787968637137,0.883164973845552,0.655593431782173,0.760191006068622,3.67159787071134,8.8181743737635,1.37842349302267,2.25636785363138,1.36401656792831,0.803892390468535,9.12086383404657,3.62015485516633,6.18378547512845,1.66645102024618,0.387533459016037,0.31037357147929,0,4.45530107947154,5.45716410187192,10.4504038990541,4.79126621519393,2.28996980249598,2.29511057256564,2.99394320891412,0,0,0,0.359300808426348,7.03922827210363,2.32258743947446,0.813792356631477,0.665756774185513,4.22674966541155,1.60284246151616 | |||
|short_description=p1@LDHD | |||
}} |
Revision as of 12:17, 20 January 2014
Short description: | p1@LDHD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LDHD_5end |
Coexpression cluster: | C1570_Hepatocyte_liver_left_heart_skeletal_tongue_diaphragm |
Association with transcript: | 0bp_to_ENST00000300051, ENST00000450168, NM_153486, NM_194436, uc002fdm.2, uc002fdn.2_5end |
EntrezGene: | LDHD |
HGNC: | 19708 |
UniProt: | Q86WU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.31e-07 | 15 |