FFCP PHASE1:Hg19::chr16:73091431..73091436,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:73091431..73091436,- | |||
|id=chr16:73091431..73091436,- | |||
|ontology_enrichment_celltype=CL:0000860!9.35e-18!45;CL:0002057!2.60e-17!42;CL:0002194!6.30e-13!63;CL:0000576!6.30e-13!63;CL:0000040!6.30e-13!63;CL:0000559!6.30e-13!63;CL:0000839!4.70e-12!70;CL:0002009!5.20e-12!65;CL:0000557!1.22e-11!71;CL:0000766!1.33e-10!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-15;33!CL:0002057;1.43e-15;33!CL:0000576;9.02e-15;48!CL:0000473;6.01e-12;39!CL:0000234;6.01e-12;39!CL:0002548;3.95e-08;6!CL:0002619;1.12e-07;3!CL:0000766;1.24e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.28e-18,42;CL:0002057,4.28e-18,42;CL:0000839,5.67e-16,66;CL:0002194,6.78e-16,59;CL:0000576,6.78e-16,59;CL:0000040,6.78e-16,59;CL:0000559,6.78e-16,59;CL:0000557,1.10e-15,67;CL:0000473,1.74e-15,48;CL:0000234,1.74e-15,48;CL:0002009,2.82e-15,61;CL:0000766,2.27e-14,72;CL:0000763,1.73e-08,108;CL:0000049,1.73e-08,108;CL:0002548,9.11e-08,6;CL:0002031,2.55e-07,120;CL:0002619,2.76e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.58e-12;42!UBERON:0005754;8.07e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.06e-11!80;UBERON:0001474!2.07e-11!86;UBERON:0000468!2.98e-11!659;UBERON:0003081!1.61e-09!216;UBERON:0002405!3.95e-09!115;UBERON:0004765!4.06e-09!101;UBERON:0001434!4.06e-09!101;UBERON:0002390!5.96e-09!102;UBERON:0003061!5.96e-09!102;UBERON:0000926!7.15e-09!448;UBERON:0004120!7.15e-09!448;UBERON:0006603!7.15e-09!448;UBERON:0002193!1.03e-08!112;UBERON:0000467!5.17e-08!625;UBERON:0000922!6.44e-08!612;UBERON:0000480!6.84e-08!626;UBERON:0000923!8.59e-08!604;UBERON:0005291!8.59e-08!604;UBERON:0006598!8.59e-08!604;UBERON:0002532!8.59e-08!604;UBERON:0002050!1.13e-07!605;UBERON:0005423!1.13e-07!605;UBERON:0000062!2.29e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;5.78e-08;3!UBERON:0004054;5.78e-08;3!UBERON:0000998;8.07e-07;1!UBERON:0006868;8.07e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.86e-15,76;UBERON:0001474,6.79e-14,82;UBERON:0004765,2.41e-12,90;UBERON:0003081,4.51e-12,203;UBERON:0002405,7.83e-12,93;UBERON:0002390,4.76e-11,98;UBERON:0003061,4.76e-11,98;UBERON:0001434,9.32e-11,100;UBERON:0002193,1.06e-09,108;UBERON:0006947,6.57e-08,3;UBERON:0004054,6.57e-08,3;UBERON:0002204,1.44e-07,167;UBERON:0000926,3.62e-07,315;UBERON:0004120,3.62e-07,315;UBERON:0006603,3.62e-07,315;UBERON:0000998,7.90e-07,1;UBERON:0006868,7.90e-07,1 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.655324116390517,0.791300934685361,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.273748850145768,0,0.152826811495903,0,0.157421562627358,0,0,0.928896739896456,0,0,0,0.0774672005803016,0,0,1.10799081706375,1.80490002723128,0.434021741431704,1.11957737119962,0,1.03030227053675,0.581592955118259,0.755751887377619,0.970336244751265,0.697287110717054,1.23350366406548,0,1.7261543539329,1.5369642391746,0.709446689665756,0.344745680736619,2.5819387343353,0,0.376484679085209,0.818718450173537,0.449446968890169,1.22433556948361,0,0.639337125799041,0.659702600373432,1.39624560335142,1.70489900213078,1.7412554317715,0,1.24564449799115,3.26623264833766,1.5644487552606,0.868755378820466,0.605399502633369,0,0.949387162322653,0.422510572623884,0.850417199860174,0.628975936525128,0.44931452458598,0.150176892841506,0,0.570025487482497,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0,0.741568885568859,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0.66944122552934,0.402829317109147,0,0.24406205754817,1.10298924103761,0,0,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,0,0.872188104285069,0,0.12663051166458,0.397227542439656,0.860509862246441,0,0,1.06748995729705,0,0,1.0776853765575,1.14423332179421,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0.250237039743928,0,0,0.30648779579902,0,0,0.717558542755448,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0,0,0.0920498986422993,0.646584227275248,0.355009592516614,0.201504196455281,0,0.193260853163297,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,0,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0.380508304469197,1.58040879591855,0.858486162094873,0.246217006087397,0,0,0,0,0,0,0,0,0,0.088048434013226,0,1.29707958075265,0.25248486685276,0.126995788584338,0,0,0,0,0,0.571652865261156,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0.821905290201534,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,0.686286847621712,0.206768026122887,0.215714200818617,0.106727557803444,1.81876542867756,0,0.604780586659361,0.496215615637554,0.61384789315225,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0.232420756919918,0,0,0,0.114814448164607,0,0,0,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0.812839312631559,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.275673144969061,0.107420244868274,0.725083469571143,0,0.356128142586949,0,0,1.65896526242959,0.10115778085555,0,0.31481234683064,0,1.23213432070436,0,0,0,0.429374660225974,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.731140468893853,1.05650146756755,0.272999822815972,0,1.13008116620243,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,1.04980416073495,0.0962221127255121,0,0,0.470719003883896,0.43050537267123,0,1.33029046061003,0,0,0,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0.213648142254946,0,0.245040215981032,0,0,0.0711418433484141,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0.23874448473769,0,0,0,0.281338832821026,0.222617410045812,0,0.63337622438398,0.19924798825107,1.38141957765574,0,0,0,0,0,0.179021174675609,0,0.197286811273867,0,0,0.969332746095218,0,0,0.520855522170466,0.174919999992391,0,0,0,0,0,0,0.173624994933292,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0,0.384751292518985,0.113942055847001,0,0.179515288819544,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0.995261931078505,0,0,0,0,0,0.134802265961354,0,0,0,0,0,1.18375320854817,0,0.30607276163049,1.13735843331278,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0.52418000472609,0,0.387025325156341,0.146178634172371,0.0821154570532092,0,0.176512253383001,0.225980740780532,0,0.19871461170299,0.126621591911757,0,0,1.49417096317547,0,0.288180834308212,0.458146384663663,0.171594997861965,0.432164393964449,0,1.17847017308398,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| |||
|short_description=p@chr16:73091431..73091436,- | |||
}} |
Revision as of 12:14, 20 January 2014
Short description: | p@chr16:73091431..73091436, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:73091431..73091436, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.28e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.28e-18 | 42 |
myeloid lineage restricted progenitor cell | 5.67e-16 | 66 |
monopoietic cell | 6.78e-16 | 59 |
monocyte | 6.78e-16 | 59 |
monoblast | 6.78e-16 | 59 |
promonocyte | 6.78e-16 | 59 |
granulocyte monocyte progenitor cell | 1.10e-15 | 67 |
defensive cell | 1.74e-15 | 48 |
phagocyte | 1.74e-15 | 48 |
macrophage dendritic cell progenitor | 2.82e-15 | 61 |
myeloid leukocyte | 2.27e-14 | 72 |
myeloid cell | 1.73e-08 | 108 |
common myeloid progenitor | 1.73e-08 | 108 |
cardiac fibroblast | 9.11e-08 | 6 |
hematopoietic lineage restricted progenitor cell | 2.55e-07 | 120 |
adult endothelial progenitor cell | 2.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.86e-15 | 76 |
bone element | 6.79e-14 | 82 |
skeletal element | 2.41e-12 | 90 |
lateral plate mesoderm | 4.51e-12 | 203 |
immune system | 7.83e-12 | 93 |
hematopoietic system | 4.76e-11 | 98 |
blood island | 4.76e-11 | 98 |
skeletal system | 9.32e-11 | 100 |
hemolymphoid system | 1.06e-09 | 108 |
male genital duct | 6.57e-08 | 3 |
internal male genitalia | 6.57e-08 | 3 |
musculoskeletal system | 1.44e-07 | 167 |
mesoderm | 3.62e-07 | 315 |
mesoderm-derived structure | 3.62e-07 | 315 |
presumptive mesoderm | 3.62e-07 | 315 |
seminal vesicle | 7.90e-07 | 1 |
seminal fluid secreting gland | 7.90e-07 | 1 |