FFCP PHASE1:Hg19::chr16:65159769..65159787,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_at_chr16:65159769..65159787,- | |||
|id=chr16:65159769..65159787,- | |||
|ontology_enrichment_celltype=CL:0000077!7.88e-10!19 | |||
|ontology_enrichment_celltype_v019=CL:0002549;2.61e-20;2!CL:0000077;9.03e-18;19!CL:0002568;4.80e-11;1!CL:0000082;2.59e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,2.49e-20,2;CL:0000077,7.91e-18,19;CL:0002568,4.58e-11,1;CL:0000082,2.26e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0010115;6.13e-11;1 | |||
|ontology_enrichment_disease=DOID:2394!9.76e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.74e-10;15!DOID:3905;2.65e-10;9!DOID:0050615;7.66e-10;16!DOID:3908;6.87e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.46e-10,15;DOID:3905,2.45e-10,9;DOID:0050615,6.51e-10,16;DOID:3908,6.87e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003124!2.43e-07!7;UBERON:0000478!5.72e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;2.61e-20;2!UBERON:0005358;2.61e-20;2!UBERON:0001886;2.61e-20;2!UBERON:0004086;2.61e-20;2!UBERON:0005282;2.61e-20;2!UBERON:0005281;2.61e-20;2!UBERON:0002363;6.13e-11;1!UBERON:0005284;1.11e-08;5!UBERON:0002118;2.16e-08;5!UBERON:0004802;2.59e-08;19!UBERON:0000115;2.59e-08;19!UBERON:0002048;3.38e-07;22!UBERON:0004807;3.38e-07;22!UBERON:0000117;3.38e-07;22!UBERON:0000171;3.38e-07;22!UBERON:0000170;3.38e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,2.49e-20,2;UBERON:0005358,2.49e-20,2;UBERON:0001886,2.49e-20,2;UBERON:0004086,2.49e-20,2;UBERON:0005282,2.49e-20,2;UBERON:0005281,2.49e-20,2;UBERON:0002363,5.57e-11,1;UBERON:0007645,5.57e-11,1;UBERON:0007647,5.57e-11,1;UBERON:0010115,5.57e-11,1;UBERON:0005284,1.09e-08,5;UBERON:0002118,2.00e-08,5;UBERON:0004802,2.26e-08,19;UBERON:0000115,2.26e-08,19;UBERON:0002048,3.01e-07,22;UBERON:0000117,3.01e-07,22;UBERON:0000171,3.01e-07,22;UBERON:0000170,3.01e-07,22;UBERON:0005597,3.01e-07,22;UBERON:0000118,3.01e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.52908960491121,0.791300934685361,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0.134710672069688,0,5.75158225050739,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0.85422955527427,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0,0,0.710019185033229,0.302256294682921,0,0,0,0,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0.36669142910475,3.36106460970222,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0.791951872933429,8.741741934728,5.22920075160176,10.8970560388442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7861266062886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0.638002319463839,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,2.96976924253893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.0524545881349981,0,64.722729499157,0,0,0,0,0,0,0.326587360109409,0,0,1.19271615249795,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.318593534327405,0,0.621051827505038,0,0.265841714557995,0,0.751288044986092,3.04644169735036,1.22061219961398,0,1.8259794697223,0,0,0,0,0,0,0,1.71553273099941,0.260994291965212,0.906823702049089,0.231522474323834,0,0,0.617602894321944,2.19284049578707,0,1.92914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,1.01839517972415,0,0.495743057036009,1.67593475391973,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0.690359926060101,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80713731262336,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:65159769..65159787,- | |||
}} |
Revision as of 11:47, 20 January 2014
Short description: | p@chr16:65159769..65159787, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:65159769..65159787, - |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 2.49e-20 | 2 |
mesothelial cell | 7.91e-18 | 19 |
mesenchymal stem cell of Wharton's jelly | 4.58e-11 | 1 |
epithelial cell of lung | 2.26e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 2.49e-20 | 2 |
ventricle of nervous system | 2.49e-20 | 2 |
choroid plexus | 2.49e-20 | 2 |
brain ventricle | 2.49e-20 | 2 |
ventricular system of brain | 2.49e-20 | 2 |
ventricular system of central nervous system | 2.49e-20 | 2 |
dura mater | 5.57e-11 | 1 |
future meninx | 5.57e-11 | 1 |
ectomeninx | 5.57e-11 | 1 |
future dura mater | 5.57e-11 | 1 |
brain vasculature | 1.09e-08 | 5 |
right ovary | 2.00e-08 | 5 |
respiratory tract epithelium | 2.26e-08 | 19 |
lung epithelium | 2.26e-08 | 19 |
lung | 3.01e-07 | 22 |
respiratory tube | 3.01e-07 | 22 |
respiration organ | 3.01e-07 | 22 |
pair of lungs | 3.01e-07 | 22 |
lung primordium | 3.01e-07 | 22 |
lung bud | 3.01e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.46e-10 | 15 |
lung carcinoma | 2.45e-10 | 9 |
respiratory system cancer | 6.51e-10 | 16 |
non-small cell lung carcinoma | 6.87e-09 | 5 |