FFCP PHASE1:Hg19::chr16:56643282..56643333,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3573 | |||
|description=CAGE_peak_at_chr16:56643282..56643333,- | |||
|id=chr16:56643282..56643333,- | |||
|ontology_enrichment_celltype=CL:0000222!4.66e-22!119;CL:0000220!1.52e-21!246;CL:0002321!1.31e-20!248;CL:0000680!7.78e-16!57;CL:0000056!7.78e-16!57;CL:0000355!7.78e-16!57;CL:0000183!1.71e-14!59;CL:0000187!4.06e-14!54;CL:0000066!4.58e-13!254;CL:0000192!1.74e-12!42;CL:0000514!1.74e-12!42;CL:0000055!1.22e-11!180;CL:0000359!1.25e-10!32;CL:0000393!1.85e-10!60;CL:0000211!1.85e-10!60;CL:0000076!9.96e-08!62;CL:0002139!2.68e-07!24;CL:0000213!3.13e-07!57;CL:0000215!3.13e-07!57;CL:1000449!4.45e-07!16;CL:0002368!9.19e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.51e-11;32!CL:0000192;2.59e-10;43!CL:0000187;1.51e-09;55!CL:0002139;9.11e-08;24!CL:1000449;9.51e-08;15!CL:0000115;2.45e-07;36!CL:0002368;3.02e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.61e-26,250;CL:0000222,2.15e-25,121;CL:0000680,9.01e-18,58;CL:0000056,9.01e-18,58;CL:0000355,9.01e-18,58;CL:0000187,7.67e-16,55;CL:0000192,6.26e-14,43;CL:0000514,6.26e-14,43;CL:0000393,1.32e-12,61;CL:0000211,1.32e-12,61;CL:0000066,2.59e-12,253;CL:0000359,9.25e-12,32;CL:0000115,1.59e-08,36;CL:0000213,1.75e-08,58;CL:0000215,1.75e-08,58;CL:0000076,2.78e-08,63;CL:0002078,4.98e-08,45;CL:0002139,5.13e-08,24;CL:1000449,9.58e-08,15;CL:0002368,2.04e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000514;2.59e-10;43!CL:0000355;8.16e-10;58!CL:0000222;3.17e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.17e-23!143;UBERON:0000119!3.49e-23!312;UBERON:0000486!1.80e-22!82;UBERON:0000483!1.94e-22!309;UBERON:0002100!2.75e-21!216;UBERON:0000914!7.43e-21!83;UBERON:0002329!7.43e-21!83;UBERON:0003077!7.43e-21!83;UBERON:0003059!7.43e-21!83;UBERON:0007282!7.43e-21!83;UBERON:0009618!7.43e-21!83;UBERON:0007285!7.43e-21!83;UBERON:0000490!2.23e-19!138;UBERON:0004290!4.64e-19!70;UBERON:0003914!2.54e-18!118;UBERON:0000481!1.04e-17!347;UBERON:0000475!2.08e-17!365;UBERON:0002049!9.98e-17!79;UBERON:0007798!9.98e-17!79;UBERON:0001134!2.75e-16!61;UBERON:0002036!2.75e-16!61;UBERON:0003082!2.75e-16!61;UBERON:0003104!3.81e-16!238;UBERON:0009142!3.81e-16!238;UBERON:0002385!8.52e-16!63;UBERON:0001015!8.52e-16!63;UBERON:0000383!8.52e-16!63;UBERON:0000477!1.07e-15!286;UBERON:0000055!2.36e-14!69;UBERON:0001637!3.10e-13!42;UBERON:0003509!3.10e-13!42;UBERON:0004572!3.10e-13!42;UBERON:0001981!3.69e-13!60;UBERON:0007500!3.69e-13!60;UBERON:0004537!3.69e-13!60;UBERON:0006965!3.69e-13!60;UBERON:0004111!6.78e-13!241;UBERON:0004872!4.87e-12!84;UBERON:0001009!4.25e-11!113;UBERON:0004535!5.54e-11!110;UBERON:0004573!4.41e-10!33;UBERON:0004571!4.41e-10!33;UBERON:0000025!8.69e-10!194;UBERON:0000923!1.71e-09!604;UBERON:0005291!1.71e-09!604;UBERON:0006598!1.71e-09!604;UBERON:0002532!1.71e-09!604;UBERON:0000467!1.98e-09!625;UBERON:0002050!2.10e-09!605;UBERON:0005423!2.10e-09!605;UBERON:0000480!3.50e-09!626;UBERON:0000468!4.21e-09!659;UBERON:0000922!2.34e-08!612;UBERON:0000487!4.39e-07!22;UBERON:0004211!4.45e-07!16;UBERON:0001285!4.45e-07!16;UBERON:0007684!4.45e-07!16;UBERON:0003220!4.45e-07!16;UBERON:0004208!4.45e-07!16;UBERON:0006555!9.14e-07!17;UBERON:0005103!9.14e-07!17;UBERON:0000083!9.14e-07!17;UBERON:0009201!9.14e-07!17;UBERON:0004819!9.14e-07!17;UBERON:0006553!9.14e-07!17;UBERON:0003074!9.14e-07!17;UBERON:0003060!9.14e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.55e-11;42!UBERON:0003509;9.55e-11;42!UBERON:0004572;9.55e-11;42!UBERON:0004573;2.51e-10;33!UBERON:0004571;2.51e-10;33!UBERON:0003914;2.59e-10;74!UBERON:0002049;7.57e-09;75!UBERON:0007798;7.57e-09;75!UBERON:0002385;1.07e-08;31!UBERON:0001015;1.07e-08;31!UBERON:0000383;1.07e-08;31!UBERON:0007500;1.16e-08;56!UBERON:0001981;1.16e-08;56!UBERON:0004537;1.16e-08;56!UBERON:0000055;3.67e-08;65!UBERON:0006555;9.51e-08;15!UBERON:0004819;9.51e-08;15!UBERON:0001285;9.51e-08;15!UBERON:0007684;9.51e-08;15!UBERON:0000487;1.49e-07;22!UBERON:0006914;3.27e-07;25 | |||
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| |||
|short_description=p@chr16:56643282..56643333,- | |||
}} |
Revision as of 03:43, 12 January 2014
Short description: | p@chr16:56643282..56643333, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:56643282..56643333, - |
Coexpression cluster: | C3573_liver_Bronchial_Mesenchymal_Fibroblast_Tracheal_Keratinocyte_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.61e-26 | 250 |
mesodermal cell | 2.15e-25 | 121 |
muscle precursor cell | 9.01e-18 | 58 |
myoblast | 9.01e-18 | 58 |
multi-potent skeletal muscle stem cell | 9.01e-18 | 58 |
muscle cell | 7.67e-16 | 55 |
smooth muscle cell | 6.26e-14 | 43 |
smooth muscle myoblast | 6.26e-14 | 43 |
electrically responsive cell | 1.32e-12 | 61 |
electrically active cell | 1.32e-12 | 61 |
epithelial cell | 2.59e-12 | 253 |
vascular associated smooth muscle cell | 9.25e-12 | 32 |
endothelial cell | 1.59e-08 | 36 |
lining cell | 1.75e-08 | 58 |
barrier cell | 1.75e-08 | 58 |
squamous epithelial cell | 2.78e-08 | 63 |
meso-epithelial cell | 4.98e-08 | 45 |
endothelial cell of vascular tree | 5.13e-08 | 24 |
epithelial cell of nephron | 9.58e-08 | 15 |
respiratory epithelial cell | 2.04e-07 | 13 |