FFCP PHASE1:Hg19::chr16:53483983..53483994,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9894 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z913 | |||
|association_with_transcript=0bp_to_ENST00000544545_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_10_at_RBL2_5end | |||
|id=chr16:53483983..53483994,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.84e-36!18;CL:0000789!3.84e-36!18;CL:0002420!3.84e-36!18;CL:0002419!3.84e-36!18;CL:0000790!3.84e-36!18;CL:0000625!8.37e-34!11;CL:0000838!6.77e-33!52;CL:0000542!3.86e-32!53;CL:0000051!3.86e-32!53;CL:0000084!1.69e-28!25;CL:0000827!1.69e-28!25;CL:0002087!6.28e-15!119;CL:0000738!1.42e-12!140;CL:0002031!1.08e-10!124;CL:0000842!7.55e-10!3;CL:0000037!1.15e-09!172;CL:0000566!1.15e-09!172;CL:0000988!9.96e-09!182;CL:0000624!4.93e-08!6;CL:0002032!6.83e-08!165;CL:0000837!6.83e-08!165;CL:0000224!1.77e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.47e-41;11!CL:0000791;2.22e-31;18!CL:0000789;2.22e-31;18!CL:0002419;2.22e-31;18!CL:0000084;3.25e-22;25!CL:0000895;2.95e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.36e-41,11;CL:0000791,1.79e-31,18;CL:0000789,1.79e-31,18;CL:0002420,1.79e-31,18;CL:0002419,1.79e-31,18;CL:0000790,1.79e-31,18;CL:0000084,2.79e-22,25;CL:0000827,2.79e-22,25;CL:0000838,5.52e-10,52;CL:0000542,9.05e-10,53;CL:0000051,9.05e-10,53;CL:0000810,2.13e-08,1;CL:0000895,2.13e-08,1;CL:0002436,2.13e-08,1;CL:0002427,2.13e-08,1;CL:0002428,2.13e-08,1;CL:0002429,2.13e-08,1;CL:0002433,2.13e-08,1;CL:0002431,2.13e-08,1;CL:0002432,2.13e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.22e-31;18!CL:0002427;2.95e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.02e-18!15;UBERON:0000179!1.02e-18!15;UBERON:0000463!1.02e-18!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.70e-11;15!UBERON:0000179;1.70e-11;15!UBERON:0000463;1.70e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.04e-11,15;UBERON:0000179,2.04e-11,15;UBERON:0000463,2.04e-11,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.328402357799783,0.393553906568396,0,0,0.154816123316076,0,0,0,0.542270404062111,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0.954053754535364,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,4.34684888015763,0,0,3.89653456815823,1.6711568532776,0.294605907474837,0.221533894583621,0.270803863765016,1.0247305578054,1.1705341280389,1.80881695064044,3.31620021343018,8.98389565778663,3.55887751588945,4.0131124213457,4.18142095219907,4.30575502250752,1.91610246800961,1.03088233644789,2.02415753615602,7.00843911513013,3.90650072313851,2.85135613334512,3.312652619711,4.09557155694139,3.74792179657038,7.57687206540854,5.74789597844733,0.201606743224732,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,3.0585488285695,0,1.19115887728894,0.411362273086194,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p10@RBL2 | |||
}} |
Revision as of 03:35, 12 January 2014
Short description: | p10@RBL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RBL2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000544545_5end |
EntrezGene: | RBL2 |
HGNC: | 9894 |
UniProt: | B7Z913 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.36e-41 | 11 |
mature alpha-beta T cell | 1.79e-31 | 18 |
alpha-beta T cell | 1.79e-31 | 18 |
immature T cell | 1.79e-31 | 18 |
mature T cell | 1.79e-31 | 18 |
immature alpha-beta T cell | 1.79e-31 | 18 |
T cell | 2.79e-22 | 25 |
pro-T cell | 2.79e-22 | 25 |
lymphoid lineage restricted progenitor cell | 5.52e-10 | 52 |
lymphocyte | 9.05e-10 | 53 |
common lymphoid progenitor | 9.05e-10 | 53 |
CD4-positive, alpha-beta thymocyte | 2.13e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.13e-08 | 1 |
mature CD4 single-positive thymocyte | 2.13e-08 | 1 |
resting double-positive thymocyte | 2.13e-08 | 1 |
double-positive blast | 2.13e-08 | 1 |
CD69-positive double-positive thymocyte | 2.13e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.13e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.13e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.13e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 2.04e-11 | 15 |
haemolymphatic fluid | 2.04e-11 | 15 |
organism substance | 2.04e-11 | 15 |