FFCP PHASE1:Hg19::chr16:31581029..31581037,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=440359 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=2429 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-184bp_to_NR_027011,uc010vfr.1_5end | |||
|coexpression_cluster_id=C3230 | |||
|description=CAGE_peak_1_at_CSDAP1_5end | |||
|id=chr16:31581029..31581037,- | |||
|ontology_enrichment_celltype=CL:0002057!7.34e-16!42;CL:0000860!8.11e-16!45;CL:0000557!1.17e-09!71;CL:0000839!2.91e-09!70;CL:0002009!3.77e-09!65;CL:0002194!2.53e-08!63;CL:0000576!2.53e-08!63;CL:0000040!2.53e-08!63;CL:0000559!2.53e-08!63;CL:0000066!2.08e-07!254;CL:0002139!4.25e-07!24;CL:0000766!8.89e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-18;33!CL:0002057;2.04e-18;33!CL:0000473;6.19e-13;39!CL:0000234;6.19e-13;39!CL:0000576;3.19e-08;48!CL:0002139;3.06e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.20e-16,42;CL:0002057,1.20e-16,42;CL:0000473,2.38e-14,48;CL:0000234,2.38e-14,48;CL:0000557,1.94e-10,67;CL:0000839,5.35e-10,66;CL:0002009,9.82e-10,61;CL:0002194,8.01e-09,59;CL:0000576,8.01e-09,59;CL:0000040,8.01e-09,59;CL:0000559,8.01e-09,59;CL:0000066,1.48e-07,253;CL:0002139,2.48e-07,24;CL:0000076,4.74e-07,63;CL:0000766,5.55e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;7.69e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!5.81e-18!448;UBERON:0004120!5.81e-18!448;UBERON:0006603!5.81e-18!448;UBERON:0000468!1.44e-14!659;UBERON:0003081!1.75e-14!216;UBERON:0000467!3.20e-13!625;UBERON:0000480!5.08e-13!626;UBERON:0002193!2.35e-12!112;UBERON:0000922!4.95e-11!612;UBERON:0002390!1.03e-10!102;UBERON:0003061!1.03e-10!102;UBERON:0000923!2.75e-10!604;UBERON:0005291!2.75e-10!604;UBERON:0006598!2.75e-10!604;UBERON:0002532!2.75e-10!604;UBERON:0002050!3.24e-10!605;UBERON:0005423!3.24e-10!605;UBERON:0001009!5.85e-09!113;UBERON:0002371!1.78e-08!80;UBERON:0004535!7.48e-08!110;UBERON:0001474!8.38e-08!86;UBERON:0002405!1.43e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.18e-14,203;UBERON:0002193,1.18e-12,108;UBERON:0000926,3.91e-11,315;UBERON:0004120,3.91e-11,315;UBERON:0006603,3.91e-11,315;UBERON:0002390,6.34e-11,98;UBERON:0003061,6.34e-11,98;UBERON:0001009,1.67e-09,112;UBERON:0002405,3.52e-09,93;UBERON:0000922,9.46e-09,592;UBERON:0002371,1.02e-08,76;UBERON:0004535,2.64e-08,109;UBERON:0005423,3.10e-08,581;UBERON:0001474,6.29e-08,82;UBERON:0002050,1.41e-07,564;UBERON:0000923,1.82e-07,560;UBERON:0010316,1.82e-07,560;UBERON:0005291,1.82e-07,560;UBERON:0006598,1.82e-07,560;UBERON:0010317,1.82e-07,560;UBERON:0002532,1.82e-07,560;UBERON:0004765,7.99e-07,90 | |||
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| |||
|short_description=p1@CSDAP1 | |||
}} |
Revision as of 03:21, 12 January 2014
Short description: | p1@CSDAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CSDAP1_5end |
Coexpression cluster: | C3230_skeletal_Whole_blood_tongue_heart_penis_left |
Association with transcript: | -184bp_to_NR_027011, uc010vfr.1_5end |
EntrezGene: | CSDAP1 |
HGNC: | 2429 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.20e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.20e-16 | 42 |
defensive cell | 2.38e-14 | 48 |
phagocyte | 2.38e-14 | 48 |
granulocyte monocyte progenitor cell | 1.94e-10 | 67 |
myeloid lineage restricted progenitor cell | 5.35e-10 | 66 |
macrophage dendritic cell progenitor | 9.82e-10 | 61 |
monopoietic cell | 8.01e-09 | 59 |
monocyte | 8.01e-09 | 59 |
monoblast | 8.01e-09 | 59 |
promonocyte | 8.01e-09 | 59 |
epithelial cell | 1.48e-07 | 253 |
endothelial cell of vascular tree | 2.48e-07 | 24 |
squamous epithelial cell | 4.74e-07 | 63 |
myeloid leukocyte | 5.55e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.18e-14 | 203 |
hemolymphoid system | 1.18e-12 | 108 |
mesoderm | 3.91e-11 | 315 |
mesoderm-derived structure | 3.91e-11 | 315 |
presumptive mesoderm | 3.91e-11 | 315 |
hematopoietic system | 6.34e-11 | 98 |
blood island | 6.34e-11 | 98 |
circulatory system | 1.67e-09 | 112 |
immune system | 3.52e-09 | 93 |
embryo | 9.46e-09 | 592 |
bone marrow | 1.02e-08 | 76 |
cardiovascular system | 2.64e-08 | 109 |
developing anatomical structure | 3.10e-08 | 581 |
bone element | 6.29e-08 | 82 |
embryonic structure | 1.41e-07 | 564 |
germ layer | 1.82e-07 | 560 |
germ layer / neural crest | 1.82e-07 | 560 |
embryonic tissue | 1.82e-07 | 560 |
presumptive structure | 1.82e-07 | 560 |
germ layer / neural crest derived structure | 1.82e-07 | 560 |
epiblast (generic) | 1.82e-07 | 560 |
skeletal element | 7.99e-07 | 90 |