FFCP PHASE1:Hg19::chr16:30194293..30194307,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11151 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2252 | |||
|TSSclassifier=weak | |||
|UniProt=P31146 | |||
|association_with_transcript=-423bp_to_NM_001193333,NM_007074_5end | |||
|description=CAGE_peak_7_at_CORO1A_5end | |||
|id=chr16:30194293..30194307,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.85e-21!52;CL:0000542!2.05e-20!53;CL:0000051!2.05e-20!53;CL:0000791!5.97e-18!18;CL:0000789!5.97e-18!18;CL:0002420!5.97e-18!18;CL:0002419!5.97e-18!18;CL:0000790!5.97e-18!18;CL:0000084!6.91e-13!25;CL:0000827!6.91e-13!25;CL:0000625!1.33e-12!11;CL:0002087!3.26e-09!119;CL:0000236!2.11e-08!14;CL:0000624!2.20e-08!6;CL:0002031!4.86e-08!124;CL:0000738!4.96e-08!140;CL:0000037!8.94e-08!172;CL:0000566!8.94e-08!172;CL:0000988!1.86e-07!182;CL:0000945!3.05e-07!24;CL:0000826!3.05e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.08e-34;18!CL:0000789;3.08e-34;18!CL:0002419;3.08e-34;18!CL:0000625;3.07e-28;11!CL:0000084;3.51e-24;25!CL:0000815;8.01e-14;2!CL:0000792;8.01e-14;2!CL:0002677;8.01e-14;2!CL:0000542;5.44e-12;53!CL:0000624;3.37e-10;6!CL:0000898;1.63e-09;3!CL:0000236;4.44e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.03e-34,18;CL:0000789,1.03e-34,18;CL:0002420,1.03e-34,18;CL:0002419,1.03e-34,18;CL:0000790,1.03e-34,18;CL:0000625,1.45e-28,11;CL:0000084,1.61e-24,25;CL:0000827,1.61e-24,25;CL:0000838,1.02e-21,52;CL:0000542,2.94e-21,53;CL:0000051,2.94e-21,53;CL:0000815,3.01e-14,2;CL:0000792,3.01e-14,2;CL:0002677,3.01e-14,2;CL:0000624,2.27e-10,6;CL:0000898,8.52e-10,3;CL:0002087,1.45e-09,115;CL:0000738,7.54e-09,136;CL:0002031,8.85e-08,120;CL:0000236,1.74e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;3.08e-34;18!CL:0000051;5.44e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.07e-10!15;UBERON:0000179!9.07e-10!15;UBERON:0000463!9.07e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.33e-26;15!UBERON:0000179;2.33e-26;15!UBERON:0000463;2.33e-26;15!UBERON:0002390;9.55e-12;32!UBERON:0002193;4.69e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.93e-26,15;UBERON:0000179,2.93e-26,15;UBERON:0000463,2.93e-26,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845021145247767,0.425208599930087,0,0.336985893439485,0.600707571366025,0,0,0.19891667719909,0,1.75996244461323,0.546138611262131,0,0.426730222566507,1.20118796110804,0.574752439954483,1.32208974556972,0.954053754535364,0.569212969109448,0.587237189370939,1.14681968437569,0,0.560508562981536,0,0.393419540227666,0.393010762749165,1.23360899399706,0.501559486172034,1.62961133316795,0.473447805734733,7.79306913631645,0.557052284425868,1.76763544484902,1.77227115666897,2.16643091012012,0.896639238079726,0.520237390239513,0.822189523018381,0.276350017785848,1.15921234294021,3.11401782640327,3.47803076516627,0,0.679856056185397,0.766440987203842,1.03088233644789,0.759059076058509,1.59282707162048,0,4.75226022224187,1.35517607169996,1.53583933385302,2.49861453104692,1.89421801635213,0.821127996921047,0.80642697289893,0.802320587350522,1.44824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,1.01489521846434,1.52927441428475,1.13929437434833,2.1440859791201,0.411362273086194,1.94541993357815,1.62009431171434,1.58625035258854,0.106824071127473,0,0.245040215981032,0,0,0,0,0.199579371432817,0.191505370132367,0.635020748171649,0,0,0.228234679033192,0.156679895773023,0,0.677167111206413,0,0.403599414382095,0,0.343505344755765,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,0,0.762760950878299,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0.108647371922008,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.138314504928436,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0.348724276104376,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0.352894871715692,0,0,0.458729283404541,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,1.1218771271618,0.26721740526556,0.459474497674225,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.193766729508018,0.31037357147929,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0.404112318087525,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0.603821380773079,0 | |||
|short_description=p7@CORO1A | |||
}} |
Revision as of 03:09, 12 January 2014
Short description: | p7@CORO1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CORO1A_5end |
Coexpression cluster: | NA |
Association with transcript: | -423bp_to_NM_001193333, NM_007074_5end |
EntrezGene: | CORO1A |
HGNC: | 2252 |
UniProt: | P31146 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.03e-34 | 18 |
alpha-beta T cell | 1.03e-34 | 18 |
immature T cell | 1.03e-34 | 18 |
mature T cell | 1.03e-34 | 18 |
immature alpha-beta T cell | 1.03e-34 | 18 |
CD8-positive, alpha-beta T cell | 1.45e-28 | 11 |
T cell | 1.61e-24 | 25 |
pro-T cell | 1.61e-24 | 25 |
lymphoid lineage restricted progenitor cell | 1.02e-21 | 52 |
lymphocyte | 2.94e-21 | 53 |
common lymphoid progenitor | 2.94e-21 | 53 |
regulatory T cell | 3.01e-14 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.01e-14 | 2 |
naive regulatory T cell | 3.01e-14 | 2 |
CD4-positive, alpha-beta T cell | 2.27e-10 | 6 |
naive T cell | 8.52e-10 | 3 |
nongranular leukocyte | 1.45e-09 | 115 |
leukocyte | 7.54e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 8.85e-08 | 120 |
B cell | 1.74e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 2.93e-26 | 15 |
haemolymphatic fluid | 2.93e-26 | 15 |
organism substance | 2.93e-26 | 15 |