FFCP PHASE1:Hg19::chr16:20775358..20775386,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6296 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10522 | |||
|TSSclassifier=strong | |||
|UniProt=Q53FZ2 | |||
|association_with_transcript=46bp_to_ENST00000289416,ENST00000440284,NM_005622,NM_202000,uc002dhq.2,uc002dhr.2_5end | |||
|coexpression_cluster_id=C3542 | |||
|description=CAGE_peak_2_at_ACSM3_5end | |||
|id=chr16:20775358..20775386,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!9.90e-09!51;DOID:0060083!9.90e-09!51;DOID:8692!1.96e-08!31;DOID:1240!2.46e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.66e-14;8!DOID:8692;5.05e-12;31!DOID:1240;7.78e-10;39!DOID:2531;2.09e-07;51!DOID:0060083;2.09e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.77e-14,8;DOID:8692,2.38e-12,31;DOID:1240,2.28e-11,39;DOID:2531,9.54e-10,51;DOID:0060083,9.54e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0004921!9.22e-09!129;UBERON:0004185!9.22e-09!129;UBERON:0005409!3.49e-07!35;UBERON:0001007!4.30e-07!155;UBERON:0001555!4.30e-07!155;UBERON:0007026!4.30e-07!155;UBERON:0005057!4.79e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.21e-07;19!UBERON:0006925;1.21e-07;19!UBERON:0002423;1.74e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.09e-07,19;UBERON:0006925,1.09e-07,19;UBERON:0008836,1.09e-07,19;UBERON:0009497,1.64e-07,25;UBERON:0000015,1.64e-07,25;UBERON:0002423,1.64e-07,25;UBERON:0006235,1.64e-07,25;UBERON:0004161,1.64e-07,25 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,1.68109492645493,1.88831355734875,2.36132343941038,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0.587200878669695,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.628975936525128,0.112328631146495,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,5.53106578027662,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,2.48860243445654,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,2.94848165003288,4.72631925345123,0,1.10689594688802,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.352193736052904,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0.451199612907412,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.784306353074702,0,0,0,6.80070676874967,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.74277184738353,0,0,0,0,1.01489521846434,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,0.245040215981032,0,0.28853842595289,0,0,0.399158742865633,0.191505370132367,0,0,3.36956613736151,0,0.313359791546046,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0,0,0,0,1.9538809540204,0,0,1.6227340708559,0,2.81974010175699,35.1824215967453,0,0,1.5602073798847,0,0,0.296964680832639,0,0,0,0,0,0,0,0.552567831062295,0,0,1.47701766553283,0,0,0,0,0.493217028184668,0,0,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0.217294743844016,0,0,0,0,0,7.47952568550704,15.3405049219683,13.1361897992885,14.0970133059708,6.64138064534648,0.476809736941136,0,1.30586246527318,0.989471500037586,0.432777279484182,0.995261931078505,0.707660516026713,2.4441205797345,0,0.617819694732514,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0,0,1.18375320854817,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0,0,0.225980740780532,0,0,0,0.586654148204409,0,1.28071796843612,0,4.7549837660855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0.236349546921671,0.494495150286999,0.539228350833479,0.492137407573744,0.423366660328922,0,0,0,0.275078873194468,0,0,0,0,0,11.1116047291869,2.25554728980492,0,0,0,0,0,0,0,0,0,0,6.64949418069646,0,0,7.03450721654796,2.65013777824443,0,0,1.19760786519031,0,2.24253566392159,1.72924735609633,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,0,0,0,1.54993481694734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.676892955143315,0,8.59665412356402,0.523813388962845,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0.535701835878287,0,0,0.227662191351298,0.266107110487916,0.115233987555779,0,0,0,0.118193840883968,0,2.11931350696388,0,0.280272163313789,0,0.215927591218621,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0,0,0,0,1.27016115057279,0,0,0,2.34896406775364,0.883352102537187,48.88908791789,0,0.410651227424988,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0.926089897295336,0.655678681511872,0,0.490296643507811,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,1.5870805215462,0,0,0,0,0.109265571963696,0,0,0,0,0,0.530450887527676,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0.217716747896961,0,0.134704106029175,0.143444410785353,0,0,0,0,0.449126010532934,0,0.244482888365733,0.813792356631477,0,0,0 | |||
|short_description=p2@ACSM3 | |||
}} |
Revision as of 02:41, 12 January 2014
Short description: | p2@ACSM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACSM3_5end |
Coexpression cluster: | C3542_signet_adenocarcinoma_chronic_liver_Hepatocyte_kidney_gastric |
Association with transcript: | 46bp_to_ENST00000289416, ENST00000440284, NM_005622, NM_202000, uc002dhq.2, uc002dhr.2_5end |
EntrezGene: | ACSM3 |
HGNC: | 10522 |
UniProt: | Q53FZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.09e-07 | 19 |
digestive gland | 1.09e-07 | 19 |
liver bud | 1.09e-07 | 19 |
epithelium of foregut-midgut junction | 1.64e-07 | 25 |
anatomical boundary | 1.64e-07 | 25 |
hepatobiliary system | 1.64e-07 | 25 |
foregut-midgut junction | 1.64e-07 | 25 |
septum transversum | 1.64e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.77e-14 | 8 |
myeloid leukemia | 2.38e-12 | 31 |
leukemia | 2.28e-11 | 39 |
hematologic cancer | 9.54e-10 | 51 |
immune system cancer | 9.54e-10 | 51 |