FFCP PHASE1:Hg19::chr16:1401799..1401896,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115939 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14175 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UJK0 | |||
|association_with_transcript=0bp_to_NM_001001410,uc002cll.2_5end | |||
|coexpression_cluster_id=C385 | |||
|description=CAGE_peak_1_at_C16orf42_5end | |||
|id=chr16:1401799..1401896,- | |||
|ontology_enrichment_celltype=CL:0000220!1.55e-21!246;CL:0002321!3.83e-21!248;CL:0000222!1.05e-20!119;CL:0000183!1.38e-16!59;CL:0000680!3.93e-14!57;CL:0000056!3.93e-14!57;CL:0000355!3.93e-14!57;CL:0000187!4.95e-14!54;CL:0000192!3.85e-13!42;CL:0000514!3.85e-13!42;CL:0000055!4.23e-13!180;CL:0000393!1.51e-12!60;CL:0000211!1.51e-12!60;CL:0000359!2.18e-11!32;CL:0000548!3.87e-10!679;CL:0000004!3.87e-10!679;CL:0000255!3.87e-10!679;CL:0000012!1.52e-09!682;CL:0000066!1.12e-08!254;CL:0000144!3.28e-08!625;CL:0002371!1.18e-07!591;CL:0002078!5.96e-07!44;CL:0000213!8.34e-07!57;CL:0000215!8.34e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.21e-10;32!CL:0000192;1.43e-09;43!CL:0000187;3.31e-08;55!CL:0000393;6.04e-07;61!CL:0000211;6.04e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.31e-21,250;CL:0000222,3.61e-21,121;CL:0000680,4.56e-14,58;CL:0000056,4.56e-14,58;CL:0000355,4.56e-14,58;CL:0000187,5.84e-14,55;CL:0000192,4.89e-13,43;CL:0000514,4.89e-13,43;CL:0000393,1.66e-12,61;CL:0000211,1.66e-12,61;CL:0000359,2.18e-11,32;CL:0000066,1.22e-08,253;CL:0002078,2.35e-07,45;CL:0000213,3.57e-07,58;CL:0000215,3.57e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.43e-09;43!CL:0000355;2.47e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!3.06e-18!82;UBERON:0000914!3.30e-17!83;UBERON:0002329!3.30e-17!83;UBERON:0003077!3.30e-17!83;UBERON:0003059!3.30e-17!83;UBERON:0007282!3.30e-17!83;UBERON:0009618!3.30e-17!83;UBERON:0007285!3.30e-17!83;UBERON:0004290!8.29e-17!70;UBERON:0005256!4.95e-16!143;UBERON:0004872!9.71e-16!84;UBERON:0003914!5.76e-15!118;UBERON:0002100!1.16e-14!216;UBERON:0003104!1.55e-14!238;UBERON:0009142!1.55e-14!238;UBERON:0001134!6.81e-14!61;UBERON:0002036!6.81e-14!61;UBERON:0003082!6.81e-14!61;UBERON:0002049!2.53e-13!79;UBERON:0007798!2.53e-13!79;UBERON:0002385!4.12e-13!63;UBERON:0001015!4.12e-13!63;UBERON:0000383!4.12e-13!63;UBERON:0001981!1.17e-12!60;UBERON:0007500!1.17e-12!60;UBERON:0004537!1.17e-12!60;UBERON:0006965!1.17e-12!60;UBERON:0000055!1.50e-12!69;UBERON:0000490!5.87e-12!138;UBERON:0001637!8.38e-12!42;UBERON:0003509!8.38e-12!42;UBERON:0004572!8.38e-12!42;UBERON:0000481!1.19e-11!347;UBERON:0001009!2.76e-11!113;UBERON:0000483!4.26e-11!309;UBERON:0000119!5.42e-11!312;UBERON:0004535!1.11e-10!110;UBERON:0000477!2.35e-08!286;UBERON:0000475!2.69e-08!365;UBERON:0004573!6.78e-08!33;UBERON:0004571!6.78e-08!33;UBERON:0003103!3.23e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.37e-08;74!UBERON:0001637;2.51e-08;42!UBERON:0003509;2.51e-08;42!UBERON:0004572;2.51e-08;42!UBERON:0007500;4.86e-08;56!UBERON:0001981;4.86e-08;56!UBERON:0004537;4.86e-08;56!UBERON:0004573;5.07e-07;33!UBERON:0004571;5.07e-07;33!UBERON:0000353;8.12e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.57e-20,78;UBERON:0000486,3.40e-18,83;UBERON:0002329,9.49e-17,71;UBERON:0003059,9.49e-17,71;UBERON:0007282,9.49e-17,71;UBERON:0004290,9.49e-17,71;UBERON:0009618,9.49e-17,71;UBERON:0007524,1.83e-16,73;UBERON:0003077,3.61e-16,72;UBERON:0007285,3.61e-16,72;UBERON:0004872,9.56e-16,83;UBERON:0003104,4.22e-15,160;UBERON:0009142,4.22e-15,160;UBERON:0003914,5.85e-15,117;UBERON:0000490,2.01e-14,148;UBERON:0001134,7.68e-14,62;UBERON:0002036,7.68e-14,62;UBERON:0003082,7.68e-14,62;UBERON:0002100,1.17e-13,199;UBERON:0002049,2.54e-13,78;UBERON:0007798,2.54e-13,78;UBERON:0005256,3.43e-13,122;UBERON:0002385,4.53e-13,64;UBERON:0001015,4.53e-13,64;UBERON:0000383,4.53e-13,64;UBERON:0007500,1.11e-12,59;UBERON:0001981,1.11e-12,59;UBERON:0004537,1.11e-12,59;UBERON:0006965,1.11e-12,59;UBERON:0000055,1.47e-12,68;UBERON:0001637,8.38e-12,42;UBERON:0003509,8.38e-12,42;UBERON:0004572,8.38e-12,42;UBERON:0000483,1.37e-11,306;UBERON:0000119,1.77e-11,309;UBERON:0001009,2.97e-11,112;UBERON:0004535,1.19e-10,109;UBERON:0004573,6.78e-08,33;UBERON:0004571,6.78e-08,33;UBERON:0003103,3.30e-07,68;UBERON:0000353,8.58e-07,15 | |||
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| |||
|short_description=p1@C16orf42 | |||
}} |
Revision as of 01:46, 12 January 2014
Short description: | p1@C16orf42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C16orf42_5end |
Coexpression cluster: | C385_Mesenchymal_Alveolar_Osteoblast_Smooth_Renal_Placental_Fibroblast |
Association with transcript: | 0bp_to_NM_001001410, uc002cll.2_5end |
EntrezGene: | C16orf42 |
HGNC: | 14175 |
UniProt: | Q9UJK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.31e-21 | 250 |
mesodermal cell | 3.61e-21 | 121 |
muscle precursor cell | 4.56e-14 | 58 |
myoblast | 4.56e-14 | 58 |
multi-potent skeletal muscle stem cell | 4.56e-14 | 58 |
muscle cell | 5.84e-14 | 55 |
smooth muscle cell | 4.89e-13 | 43 |
smooth muscle myoblast | 4.89e-13 | 43 |
electrically responsive cell | 1.66e-12 | 61 |
electrically active cell | 1.66e-12 | 61 |
vascular associated smooth muscle cell | 2.18e-11 | 32 |
epithelial cell | 1.22e-08 | 253 |
meso-epithelial cell | 2.35e-07 | 45 |
lining cell | 3.57e-07 | 58 |
barrier cell | 3.57e-07 | 58 |