FFCP PHASE1:Hg19::chr16:1020849..1020882,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64788 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14154 | |||
|TSSclassifier=strong | |||
|UniProt=B3KS80 | |||
|association_with_transcript=77bp_to_ENST00000543238_5end | |||
|description=CAGE_peak_3_at_LMF1_5end | |||
|id=chr16:1020849..1020882,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!6.26e-10!84;UBERON:0004535!9.29e-10!110;UBERON:0001009!8.76e-09!113;UBERON:0001981!2.61e-08!60;UBERON:0007500!2.61e-08!60;UBERON:0004537!2.61e-08!60;UBERON:0006965!2.61e-08!60;UBERON:0000055!2.37e-07!69;UBERON:0001637!4.14e-07!42;UBERON:0003509!4.14e-07!42;UBERON:0004572!4.14e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.48e-10,83;UBERON:0004535,9.69e-10,109;UBERON:0001009,9.29e-09,112;UBERON:0007500,1.51e-08,59;UBERON:0001981,1.51e-08,59;UBERON:0004537,1.51e-08,59;UBERON:0006965,1.51e-08,59;UBERON:0000055,2.00e-07,68;UBERON:0001637,4.41e-07,42;UBERON:0003509,4.41e-07,42;UBERON:0004572,4.41e-07,42 | |||
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| |||
|short_description=p3@LMF1 | |||
}} |
Revision as of 01:44, 12 January 2014
Short description: | p3@LMF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LMF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_ENST00000543238_5end |
EntrezGene: | LMF1 |
HGNC: | 14154 |
UniProt: | B3KS80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 3.48e-10 | 83 |
cardiovascular system | 9.69e-10 | 109 |
circulatory system | 9.29e-09 | 112 |
epithelial tube open at both ends | 1.51e-08 | 59 |
blood vessel | 1.51e-08 | 59 |
blood vasculature | 1.51e-08 | 59 |
vascular cord | 1.51e-08 | 59 |
vessel | 2.00e-07 | 68 |
artery | 4.41e-07 | 42 |
arterial blood vessel | 4.41e-07 | 42 |
arterial system | 4.41e-07 | 42 |