FFCP PHASE1:Hg19::chr15:90349614..90349663,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1415 | |||
|description=CAGE_peak_at_chr15:90349614..90349663,+ | |||
|id=chr15:90349614..90349663,+ | |||
|ontology_enrichment_celltype=CL:0000048!1.10e-22!430;CL:0000723!5.05e-22!436;CL:0000034!1.16e-20!444;CL:0002371!1.30e-19!591;CL:0000055!3.70e-17!180;CL:0002320!3.35e-16!365;CL:0000057!4.13e-14!75;CL:0000134!4.53e-14!358;CL:0000144!7.97e-14!625;CL:0000219!1.89e-11!390;CL:0000680!9.89e-11!57;CL:0000056!9.89e-11!57;CL:0000355!9.89e-11!57;CL:0002194!1.37e-09!63;CL:0000576!1.37e-09!63;CL:0000040!1.37e-09!63;CL:0000559!1.37e-09!63;CL:0000183!1.54e-09!59;CL:0000766!1.97e-09!76;CL:0002620!2.07e-09!23;CL:0000187!2.87e-09!54;CL:0002009!8.58e-09!65;CL:0000548!2.95e-08!679;CL:0000004!2.95e-08!679;CL:0000255!2.95e-08!679;CL:0000839!5.53e-08!70;CL:0000222!6.52e-08!119;CL:0002057!6.78e-08!42;CL:0000012!8.03e-08!682;CL:0000557!1.19e-07!71;CL:0000393!6.45e-07!60;CL:0000211!6.45e-07!60;CL:0000192!8.52e-07!42;CL:0000514!8.52e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.35e-09;23!CL:0000473;6.52e-07;39!CL:0000234;6.52e-07;39!CL:0002551;9.85e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.64e-13,427;CL:0000723,5.47e-13,433;CL:0000034,4.53e-12,441;CL:0000057,2.12e-10,76;CL:0002320,2.09e-09,361;CL:0000680,9.59e-09,58;CL:0000056,9.59e-09,58;CL:0000355,9.59e-09,58;CL:0002620,1.10e-08,23;CL:0000134,1.74e-07,354;CL:0000187,4.77e-07,55;CL:0000222,7.85e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!8.25e-19!167;UBERON:0002384!1.80e-16!375;UBERON:0000926!1.70e-15!448;UBERON:0004120!1.70e-15!448;UBERON:0006603!1.70e-15!448;UBERON:0000914!2.32e-13!83;UBERON:0002329!2.32e-13!83;UBERON:0003077!2.32e-13!83;UBERON:0003059!2.32e-13!83;UBERON:0007282!2.32e-13!83;UBERON:0009618!2.32e-13!83;UBERON:0007285!2.32e-13!83;UBERON:0004290!2.63e-13!70;UBERON:0003081!3.48e-11!216;UBERON:0000486!2.16e-10!82;UBERON:0002385!4.14e-10!63;UBERON:0001015!4.14e-10!63;UBERON:0000383!4.14e-10!63;UBERON:0001134!5.34e-10!61;UBERON:0002036!5.34e-10!61;UBERON:0003082!5.34e-10!61;UBERON:0005256!2.73e-09!143;UBERON:0000479!1.41e-08!787;UBERON:0002371!1.92e-08!80;UBERON:0001013!4.91e-08!14;UBERON:0002390!6.53e-08!102;UBERON:0003061!6.53e-08!102;UBERON:0004765!6.69e-08!101;UBERON:0001434!6.69e-08!101;UBERON:0002199!7.67e-08!45;UBERON:0002416!7.67e-08!45;UBERON:0004535!1.25e-07!110;UBERON:0001009!1.77e-07!113;UBERON:0002405!1.99e-07!115;UBERON:0001474!3.27e-07!86;UBERON:0000490!5.41e-07!138;UBERON:0001981!6.97e-07!60;UBERON:0007500!6.97e-07!60;UBERON:0004537!6.97e-07!60;UBERON:0006965!6.97e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.57e-08;14!UBERON:0002067;1.18e-07;9!UBERON:0002385;2.29e-07;31!UBERON:0001015;2.29e-07;31!UBERON:0000383;2.29e-07;31!UBERON:0002072;8.14e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.55e-15,167;UBERON:0000926,1.35e-13,315;UBERON:0004120,1.35e-13,315;UBERON:0006603,1.35e-13,315;UBERON:0007524,1.13e-12,73;UBERON:0002329,1.49e-12,71;UBERON:0003059,1.49e-12,71;UBERON:0007282,1.49e-12,71;UBERON:0004290,1.49e-12,71;UBERON:0009618,1.49e-12,71;UBERON:0003077,3.29e-12,72;UBERON:0007285,3.29e-12,72;UBERON:0007503,3.25e-11,78;UBERON:0000486,1.07e-10,83;UBERON:0002199,6.96e-10,46;UBERON:0002416,6.96e-10,46;UBERON:0002384,1.29e-09,371;UBERON:0002385,1.37e-08,64;UBERON:0001015,1.37e-08,64;UBERON:0000383,1.37e-08,64;UBERON:0001013,1.98e-08,14;UBERON:0001134,3.21e-08,62;UBERON:0002036,3.21e-08,62;UBERON:0003082,3.21e-08,62;UBERON:0002067,1.37e-07,9;UBERON:0004016,1.37e-07,9;UBERON:0010083,1.37e-07,9;UBERON:0003104,3.51e-07,160;UBERON:0009142,3.51e-07,160;UBERON:0005256,3.77e-07,122;UBERON:0002072,7.35e-07,5;UBERON:0000490,7.71e-07,148 | |||
|phase1_expression=0.908391896352783,1.71280419112787,0.563817616383885,0,0.893922188854576,0.872338524100369,2.53299878168311,9.47579810140246,4.44015567939725,0,0,0,0.263766978228454,2.47532705920093,1.98838425436749,2.01697543935533,2.41077811209591,2.19093027116212,2.43966399395253,1.23121058076788,5.91602004608334,1.25381888591235,0.286235987131057,0.410623275218653,0,0,0,0,0.393364276848904,0.767658796194425,1.23852898652861,0,0,0,0,0,0,1.10799081706375,0,0.868043482863407,1.34349284543955,0.647787332037959,0.77272670290256,4.21654892460738,3.02300754951048,1.4555043671269,3.95129362739664,4.11167888021826,0.309706370895104,8.63077176966451,3.58624989140741,0.709446689665756,0.689491361473237,0,0,5.45902784673554,1.36453075028923,0.898893937780338,9.18251677112708,0.962787081228281,3.19668562899521,7.25672860410775,0.997318288108159,1.70489900213078,6.38460324982885,1.70215567407342,0.622822248995575,5.52747063564835,1.0429658368404,1.08594422352558,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0.336985893439485,0.150176892841506,0.16072558669708,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,2.01210257911091,0.639312809217652,5.42158728576849,0.50133791063589,0.869079113764942,0,0.486634870302636,0,0,0.614843499851882,0.982343066232845,0,0,1.29818957461873,0.870648686496336,5.45127638127347,0,0,0,0.198762407366705,0,1.04142150482278,0,4.19499436209906,0.825354125820202,0.208994966536811,0.258416759169329,0,0,0.805658634218294,1.52054421143703,1.70843440283719,1.10298924103761,2.43042584364528,0.535798369704479,0.898117490504679,2.0270066486998,1.53316637465883,0,3.29763139074733,0,0,0.436094052142534,3.47880366186723,0.506522046658319,0.662045904066094,5.16305917347865,2.12801029319014,0,0,0.24666754841716,0.311211035399766,0.538842688278752,0.817309515567294,0.756787138224657,2.30470369792,0.70296429550139,8.42832207441865,1.1409436430889,13.4503812496621,2.46612447151906,2.26622122115384,4.9157782345787,2.85815839756851,1.59684612505298,2.27316718586684,0,0.989067717114227,0,5.74894513452991,1.0100166837244,1.00094815897571,0.277064115484183,0.877955241761676,0.612975591598039,0,0.453728732640084,3.04962380671065,0.85422955527427,0.635795703478686,9.60291507470087,2.16410311400722,3.34932702059318,2.41951913231067,9.28269827326964,1.26668106709558,1.51460264546469,0.552299391853796,0.646584227275248,4.61512470271599,0.403008392910561,0.508681776931463,0,0,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0,4.69348596989448,12.8648187638577,0,3.71494342425583,8.66255378003503,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0,5.88034845542168,1.26755034821831,1.96565443335525,2.36315962672562,0,0,0.171567810298526,0,1.1240175325762,0,0.0925884451585296,0.325808305310325,7.27954349695705,0,0,0.234817388471643,0,0.462985512576611,0,0,0,2.21595305478658,1.63802985597466,1.48631162288728,0,0.16798212819886,0,0.895585227028483,0,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.126995788584338,0,0,0,0.308482478109971,0,0,0.336393253036082,0.43596006883328,1.24675085895615,0,10.7296933755565,11.834238535784,0.531876233169741,0,2.31486636835928,0,3.99633268524149,0.285955987316295,3.7983512377401,2.46972101034231,1.95441710576241,0.710783897485092,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0.479249710983165,0,0,3.32997005335432,7.19167128926342,3.9393411912777,0,0,0,0.128343036279748,0,0,0,0,0,3.74503511973591,2.99161459204025,0.828831026872071,1.34960640891054,3.50119364741774,1.62759014219841,1.87173775377726,3.7470087647404,2.20783381047509,1.99140405487612,0.300946099727719,0,4.1389228517002,0.664225598535437,0.737476674166813,5.12613325361689,2.15381273209015,1.71571711905428,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0.604780586659361,0.496215615637554,1.07423381301644,0.561320188866147,0.384417447767103,0,0,4.45254199334973,9.25258162815933,15.9805552781814,4.43486642474569,2.59627214591811,15.2235595782547,0,0,0,0.574072240823034,0.728364672026868,0.524497659837696,0,0,0,0,0,0,3.74206151608334,0.647747748306418,0,0,0,1.78413391131527,2.49322802678617,2.0148727924996,0,0,0,0,0,0.618246069886334,0,0,0,0,0,2.41676795730305,2.00263202249038,2.76306614507033,3.58375088459779,2.25582514223375,4.49551751134108,2.98293195956353,0.267096106940212,0,0,0.127612712494584,0,0.929691098594572,3.1481234683064,0.6970372701606,1.84820148105653,0.532306030317022,0.869932992075073,1.11194531462352,0,0,0.632758849437452,1.14378116354295,0.511795582622668,0.855877976067841,1.90921948755562,0,0.359744915166629,0.823611089208164,1.64937363283961,0.404364963146632,0,0.421258456238981,0.48763373908959,6.58026422004468,1.05650146756755,1.09199929126389,1.83827061539827,1.13008116620243,1.10273068709225,1.32687795048244,0,0.578775534266688,1.9676842561399,0,0.30982349809975,1.69017361519345,1.29070216983646,1.08073945114433,0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| |||
|short_description=p@chr15:90349614..90349663,+ | |||
}} |
Revision as of 01:10, 12 January 2014
Short description: | p@chr15:90349614..90349663, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:90349614..90349663, + |
Coexpression cluster: | C1415_small_Hair_Mesenchymal_Preadipocyte_Fibroblast_duodenum_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.64e-13 | 427 |
somatic stem cell | 5.47e-13 | 433 |
stem cell | 4.53e-12 | 441 |
fibroblast | 2.12e-10 | 76 |
connective tissue cell | 2.09e-09 | 361 |
muscle precursor cell | 9.59e-09 | 58 |
myoblast | 9.59e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.59e-09 | 58 |
skin fibroblast | 1.10e-08 | 23 |
mesenchymal cell | 1.74e-07 | 354 |
muscle cell | 4.77e-07 | 55 |
mesodermal cell | 7.85e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 7.55e-15 | 167 |
mesoderm | 1.35e-13 | 315 |
mesoderm-derived structure | 1.35e-13 | 315 |
presumptive mesoderm | 1.35e-13 | 315 |
dense mesenchyme tissue | 1.13e-12 | 73 |
somite | 1.49e-12 | 71 |
presomitic mesoderm | 1.49e-12 | 71 |
presumptive segmental plate | 1.49e-12 | 71 |
dermomyotome | 1.49e-12 | 71 |
trunk paraxial mesoderm | 1.49e-12 | 71 |
paraxial mesoderm | 3.29e-12 | 72 |
presumptive paraxial mesoderm | 3.29e-12 | 72 |
epithelial vesicle | 3.25e-11 | 78 |
multilaminar epithelium | 1.07e-10 | 83 |
integument | 6.96e-10 | 46 |
integumental system | 6.96e-10 | 46 |
connective tissue | 1.29e-09 | 371 |
muscle tissue | 1.37e-08 | 64 |
musculature | 1.37e-08 | 64 |
musculature of body | 1.37e-08 | 64 |
adipose tissue | 1.98e-08 | 14 |
skeletal muscle tissue | 3.21e-08 | 62 |
striated muscle tissue | 3.21e-08 | 62 |
myotome | 3.21e-08 | 62 |
dermis | 1.37e-07 | 9 |
dermatome | 1.37e-07 | 9 |
future dermis | 1.37e-07 | 9 |
mesenchyme | 3.51e-07 | 160 |
entire embryonic mesenchyme | 3.51e-07 | 160 |
trunk mesenchyme | 3.77e-07 | 122 |
hypodermis | 7.35e-07 | 5 |
unilaminar epithelium | 7.71e-07 | 148 |