FFCP PHASE1:Hg19::chr15:80309724..80309729,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_at_chr15:80309724..80309729,+ | |||
|id=chr15:80309724..80309729,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.29e-40!24;CL:0000826!3.29e-40!24;CL:0000236!1.97e-23!14;CL:0000542!1.10e-19!53;CL:0000051!1.10e-19!53;CL:0000838!2.44e-18!52;CL:0002087!2.51e-08!119;CL:0000738!5.45e-08!140;CL:0000988!8.06e-08!182;CL:0002032!7.90e-07!165;CL:0000837!7.90e-07!165;CL:0000037!9.11e-07!172;CL:0000566!9.11e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.49e-80;24!CL:0000236;2.50e-55;13!CL:0000542;3.53e-23;53!CL:0000946;8.00e-08;1!CL:0000786;8.00e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.93e-80,24;CL:0000826,5.93e-80,24;CL:0000236,2.01e-61,14;CL:0000542,4.04e-38,53;CL:0000051,4.04e-38,53;CL:0000838,6.85e-35,52;CL:0002087,2.96e-15,115;CL:0000738,8.16e-14,136;CL:0000988,1.37e-13,177;CL:0002031,7.70e-13,120;CL:0002032,4.82e-11,161;CL:0000837,4.82e-11,161;CL:0000037,2.05e-10,168;CL:0000946,8.00e-08,1;CL:0000786,8.00e-08,1;CL:0000980,8.00e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;3.53e-23;53!UBERON:0001045;2.66e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.25e-07;1!DOID:0050177;1.25e-07;1!DOID:0050427;1.25e-07;1!DOID:12603;4.08e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.25e-07,1;DOID:0050177,1.25e-07,1;DOID:0050427,1.25e-07,1;DOID:12603,4.34e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.37e-16!15;UBERON:0000179!2.37e-16!15;UBERON:0000463!2.37e-16!15;UBERON:0002106!3.67e-07!3;UBERON:0004854!3.67e-07!3;UBERON:0009034!3.67e-07!3;UBERON:0002095!3.67e-07!3;UBERON:0004782!3.67e-07!3;UBERON:0003281!3.67e-07!3;UBERON:0009664!3.67e-07!3;UBERON:0002296!3.67e-07!3;UBERON:0005602!3.67e-07!3;UBERON:0001179!3.67e-07!3;UBERON:0006293!3.67e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.30e-14;15!UBERON:0000179;7.30e-14;15!UBERON:0000463;7.30e-14;15!UBERON:0002390;1.87e-10;32!UBERON:0002106;1.13e-08;3!UBERON:0002193;9.14e-08;42!UBERON:0002372;1.83e-07;1!UBERON:0001961;1.83e-07;1!UBERON:0001744;1.83e-07;1!UBERON:0001042;1.83e-07;1!UBERON:0001735;1.83e-07;1!UBERON:0001154;2.66e-07;1!UBERON:0001153;2.66e-07;1!UBERON:0009854;2.66e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.83e-14,15;UBERON:0000179,7.83e-14,15;UBERON:0000463,7.83e-14,15;UBERON:0002106,9.66e-09,3;UBERON:0004854,9.66e-09,3;UBERON:0009034,9.66e-09,3;UBERON:0002095,9.66e-09,3;UBERON:0004782,9.66e-09,3;UBERON:0003281,9.66e-09,3;UBERON:0009664,9.66e-09,3;UBERON:0002296,9.66e-09,3;UBERON:0005602,9.66e-09,3;UBERON:0001179,9.66e-09,3;UBERON:0006293,9.66e-09,3;UBERON:0002372,1.83e-07,1;UBERON:0001961,1.83e-07,1;UBERON:0001744,1.83e-07,1;UBERON:0001735,1.83e-07,1;UBERON:0001154,2.50e-07,1;UBERON:0001153,2.50e-07,1;UBERON:0001045,2.50e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.132949635666,4.26923065139718,5.98201937983962,1.18009283054671,0,0,0,0,0,0.387336002901508,0.568676929949686,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,4.91524750135918,4.44754626931777,2.13365111283254,4.00395987036012,3.4485146397269,2.64417949113945,6.67837628174755,2.84606484554724,3.52342313622563,4.96955196562797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0,0.238231775457789,0.822724546172388,0.648473311192717,1.08006287447623,2.37937552888281,0,0,0,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48655523978033,0,0,2.21552649829925,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0.676786981851542,0,0,0.189753732724185,0,0,0,0.141353071433941,0,0,0.176915129006678,0,4.74433805888995,3.08909847366257,2.19286093961456,0,0,0,0,0.19566461893209,0,0,0,0,0,18.9407508462261,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.393915911536118,0.164831716762333,0.471824806979294,0,0.592713324460491,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0.496166021811951,26.0847354105286,128.734776488607,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,11.7538667306895,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0.0771741581079447,0,0,0,0,0,0,0,0,1.50374268767766,0.0644578879735772,1.89888196257365,0.178553938605658,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.530450887527676,1.07185652062471,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,3.16554649168561,0.143444410785353,0,0,0,0,0,0,0,0,0,0.805095174364105,4.48795889224526 | |||
|short_description=p@chr15:80309724..80309729,+ | |||
}} |
Revision as of 00:49, 12 January 2014
Short description: | p@chr15:80309724..80309729, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:80309724..80309729, + |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.93e-80 | 24 |
pro-B cell | 5.93e-80 | 24 |
B cell | 2.01e-61 | 14 |
lymphocyte | 4.04e-38 | 53 |
common lymphoid progenitor | 4.04e-38 | 53 |
lymphoid lineage restricted progenitor cell | 6.85e-35 | 52 |
nongranular leukocyte | 2.96e-15 | 115 |
leukocyte | 8.16e-14 | 136 |
hematopoietic cell | 1.37e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 7.70e-13 | 120 |
hematopoietic oligopotent progenitor cell | 4.82e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.82e-11 | 161 |
hematopoietic stem cell | 2.05e-10 | 168 |
antibody secreting cell | 8.00e-08 | 1 |
plasma cell | 8.00e-08 | 1 |
plasmablast | 8.00e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 7.83e-14 | 15 |
haemolymphatic fluid | 7.83e-14 | 15 |
organism substance | 7.83e-14 | 15 |
spleen | 9.66e-09 | 3 |
gastrointestinal system mesentery | 9.66e-09 | 3 |
stomach region | 9.66e-09 | 3 |
mesentery | 9.66e-09 | 3 |
gastrointestinal system serosa | 9.66e-09 | 3 |
mesentery of stomach | 9.66e-09 | 3 |
gut mesentery | 9.66e-09 | 3 |
dorsal mesentery | 9.66e-09 | 3 |
dorsal mesogastrium | 9.66e-09 | 3 |
peritoneal cavity | 9.66e-09 | 3 |
spleen primordium | 9.66e-09 | 3 |
tonsil | 1.83e-07 | 1 |
mucosa-associated lymphoid tissue | 1.83e-07 | 1 |
lymphoid tissue | 1.83e-07 | 1 |
tonsillar ring | 1.83e-07 | 1 |
vermiform appendix | 2.50e-07 | 1 |
caecum | 2.50e-07 | 1 |
midgut | 2.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.25e-07 | 1 |
monogenic disease | 1.25e-07 | 1 |
xeroderma pigmentosum | 1.25e-07 | 1 |
acute leukemia | 4.34e-07 | 1 |