FFCP PHASE1:Hg19::chr15:77224017..77224024,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5955 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9935 | |||
|TSSclassifier=strong | |||
|UniProt=F8WCY5 | |||
|association_with_transcript=-54bp_to_ENST00000320963_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_RCN2_5end | |||
|id=chr15:77224017..77224024,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.41e-08!25;CL:0000540!1.75e-08!6;CL:0000031!1.75e-08!6;CL:0000404!1.75e-08!6;CL:0000047!6.37e-08!8;CL:0000133!4.70e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.97e-14;6!CL:0000404;3.97e-14;6!CL:0002582;6.78e-08;3!CL:0002592;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.71e-14,6;CL:0000031,3.71e-14,6;CL:0000404,3.71e-14,6;CL:0000047,7.30e-11,8;CL:0002592,5.93e-08,3;CL:0002582,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.13e-18;10!UBERON:0005564;1.13e-18;10!CL:0000031;3.97e-14;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.41e-11!94;UBERON:0001016!6.41e-11!94;UBERON:0005743!8.51e-11!86;UBERON:0001017!1.97e-10!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.80e-23;8!UBERON:0003135;4.84e-17;11!UBERON:0000991;3.08e-09;21!UBERON:0003101;7.61e-09;22!UBERON:0000079;7.61e-09;22!UBERON:0003498;6.78e-08;3!UBERON:0005985;6.78e-08;3!UBERON:0001621;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.42e-23,8;UBERON:0003135,5.40e-17,11;UBERON:0000991,3.26e-09,21;UBERON:0009196,3.26e-09,21;UBERON:0009117,3.26e-09,21;UBERON:0005564,3.26e-09,21;UBERON:0004176,8.03e-09,22;UBERON:0003101,8.03e-09,22;UBERON:0000079,8.03e-09,22;UBERON:0001621,5.93e-08,3 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0,2.81605012320082,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0.805658634218294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0.423863802319124,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0.243947412259191,0,0.232387885739037,0.518305275076852,0,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,0.254094624222463,0,1.54657762555539,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0,1.03850885836724,0.116210378459959,0.120859449591622,0,0.184161977871793,0,0,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0.0890320356467374,0.165284915360978,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0.313359791546046,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0.33307196799782,0,0,0,0.36408156524854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0.10893846351899,0.139423744278603,0,0,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0.72581733978073,0.664653872707185,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0.17472666824203,0.171986032471617,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0.253243183823515,0,0.0801588202515337,0,0,0.144090417154106,0.229073192331831,0.171594997861965,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0,0,0,0.136203406111576,0.643012593860077,1.37539436597234,0.415440338029185,0,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0.105600336519406,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0.314108192500469,0,0,0.1251909307065,0,0,0.124192805882767,0,0.249960815924213,0.151649117541648,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0.453411851024545,0.231522474323834,0,0,0.308801447160972,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.471797825567689,0,0,0,0.123935764259002,0,0.318004350653419,0.0788617450012534,0,0.352675943690684,0,0.642292250964595,0,0,0.205116364240755,0.252071696221718,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0.261906694481422,0.327543835020193,0,0.270150338473579,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0.339848664884159,0.197318320688547,0.236387681767936,0.222462803784138,0,0.314231179832004,0,0,0,0,0.0714765441766563,0.316027223465453,0.23248285073625,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0.467878926924211,0,0.594600453887843,0,0.109940516745429,0,0,0.218559560503957,0,0,0,0.588925401344836,0.594092800654172,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.788857810965923,0.0679914901909147,0.436350690340377,0,0,0,0,0.630832124175395,0.546327859818478,0.126698501011437,0.407955318967927,1.06886962106224,0,0,3.10692662694782,5.89521086343593,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0,0.0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| |||
|short_description=p6@RCN2 | |||
}} |
Revision as of 00:40, 12 January 2014
Short description: | p6@RCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RCN2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -54bp_to_ENST00000320963_5end |
EntrezGene: | RCN2 |
HGNC: | 9935 |
UniProt: | F8WCY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.71e-14 | 6 |
neuroblast | 3.71e-14 | 6 |
electrically signaling cell | 3.71e-14 | 6 |
neuronal stem cell | 7.30e-11 | 8 |
smooth muscle cell of the coronary artery | 5.93e-08 | 3 |
visceral preadipocyte | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 4.42e-23 | 8 |
male reproductive organ | 5.40e-17 | 11 |
gonad | 3.26e-09 | 21 |
indifferent external genitalia | 3.26e-09 | 21 |
indifferent gonad | 3.26e-09 | 21 |
gonad primordium | 3.26e-09 | 21 |
external genitalia | 8.03e-09 | 22 |
male organism | 8.03e-09 | 22 |
male reproductive system | 8.03e-09 | 22 |
coronary artery | 5.93e-08 | 3 |