FFCP PHASE1:Hg19::chr15:66084621..66084645,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10260 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24321 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z401,E7EPL3,Q05C90 | |||
|association_with_transcript=0bp_to_ENST00000431932,ENST00000443035,NM_001144823,NM_005848,uc002aph.2,uc002api.2,uc002apj.3,uc010ujj.1_5end | |||
|description=CAGE_peak_2_at_DENND4A_5end | |||
|id=chr15:66084621..66084645,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.66e-31!115;UBERON:0001049!3.55e-11!57;UBERON:0005068!3.55e-11!57;UBERON:0006241!3.55e-11!57;UBERON:0007135!3.55e-11!57;UBERON:0002346!1.26e-10!90;UBERON:0000955!1.84e-10!69;UBERON:0006238!1.84e-10!69;UBERON:0003075!1.89e-10!86;UBERON:0007284!1.89e-10!86;UBERON:0005743!3.62e-10!86;UBERON:0000481!4.28e-10!347;UBERON:0002616!1.41e-09!59;UBERON:0000073!1.44e-09!94;UBERON:0001016!1.44e-09!94;UBERON:0001017!1.81e-09!82;UBERON:0000153!2.63e-09!129;UBERON:0007811!2.63e-09!129;UBERON:0002780!3.22e-09!41;UBERON:0001890!3.22e-09!41;UBERON:0006240!3.22e-09!41;UBERON:0003080!4.53e-09!42;UBERON:0000033!5.14e-09!123;UBERON:0000062!6.26e-09!511;UBERON:0000924!5.02e-08!173;UBERON:0006601!5.02e-08!173;UBERON:0000475!5.83e-08!365;UBERON:0004121!8.53e-08!169;UBERON:0000468!1.44e-07!659;UBERON:0002020!3.77e-07!34;UBERON:0003528!3.77e-07!34;UBERON:0001893!4.29e-07!34;UBERON:0001007!5.31e-07!155;UBERON:0001555!5.31e-07!155;UBERON:0007026!5.31e-07!155;UBERON:0001869!6.98e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.65e-09;114!UBERON:0000073;4.46e-07;53!UBERON:0002616;4.46e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.13e-31,114;UBERON:0011216,1.06e-12,223;UBERON:0001049,2.61e-11,56;UBERON:0005068,2.61e-11,56;UBERON:0006241,2.61e-11,56;UBERON:0007135,2.61e-11,56;UBERON:0000073,3.72e-11,53;UBERON:0002616,3.72e-11,53;UBERON:0000955,1.47e-10,68;UBERON:0006238,1.47e-10,68;UBERON:0010314,7.59e-10,132;UBERON:0001017,1.54e-09,81;UBERON:0002780,3.14e-09,41;UBERON:0001890,3.14e-09,41;UBERON:0003080,3.14e-09,41;UBERON:0006240,3.14e-09,41;UBERON:0001016,6.02e-09,89;UBERON:0002346,2.03e-08,86;UBERON:0003075,3.17e-08,82;UBERON:0007284,3.17e-08,82;UBERON:0004121,2.64e-07,171;UBERON:0000924,2.64e-07,171;UBERON:0006601,2.64e-07,171;UBERON:0003528,3.69e-07,34;UBERON:0002020,3.69e-07,34;UBERON:0001893,4.21e-07,34;UBERON:0001869,6.85e-07,32;UBERON:0010371,7.04e-07,104 | |||
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| |||
|short_description=p2@DENND4A | |||
}} |
Revision as of 00:08, 12 January 2014
Short description: | p2@DENND4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DENND4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000431932, ENST00000443035, NM_001144823, NM_005848, uc002aph.2, uc002api.2, uc002apj.3, uc010ujj.1_5end |
EntrezGene: | DENND4A |
HGNC: | 24321 |
UniProt: | Q7Z401E7EPL3Q05C90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.13e-31 | 114 |
organ system subdivision | 1.06e-12 | 223 |
neural tube | 2.61e-11 | 56 |
neural rod | 2.61e-11 | 56 |
future spinal cord | 2.61e-11 | 56 |
neural keel | 2.61e-11 | 56 |
regional part of nervous system | 3.72e-11 | 53 |
regional part of brain | 3.72e-11 | 53 |
brain | 1.47e-10 | 68 |
future brain | 1.47e-10 | 68 |
structure with developmental contribution from neural crest | 7.59e-10 | 132 |
central nervous system | 1.54e-09 | 81 |
regional part of forebrain | 3.14e-09 | 41 |
forebrain | 3.14e-09 | 41 |
anterior neural tube | 3.14e-09 | 41 |
future forebrain | 3.14e-09 | 41 |
nervous system | 6.02e-09 | 89 |
neurectoderm | 2.03e-08 | 86 |
neural plate | 3.17e-08 | 82 |
presumptive neural plate | 3.17e-08 | 82 |
ectoderm-derived structure | 2.64e-07 | 171 |
ectoderm | 2.64e-07 | 171 |
presumptive ectoderm | 2.64e-07 | 171 |
brain grey matter | 3.69e-07 | 34 |
gray matter | 3.69e-07 | 34 |
telencephalon | 4.21e-07 | 34 |
cerebral hemisphere | 6.85e-07 | 32 |
ecto-epithelium | 7.04e-07 | 104 |