FFCP PHASE1:Hg19::chr15:55881135..55881192,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26108 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30256 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y3Y4 | |||
|association_with_transcript=0bp_to_ENST00000302000_5end | |||
|description=CAGE_peak_3_at_PYGO1_5end | |||
|id=chr15:55881135..55881192,- | |||
|ontology_enrichment_celltype=CL:0000055!4.78e-09!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.81e-23!94;UBERON:0001016!3.81e-23!94;UBERON:0005743!4.21e-21!86;UBERON:0001017!7.47e-20!82;UBERON:0000924!8.14e-20!173;UBERON:0006601!8.14e-20!173;UBERON:0002346!5.03e-19!90;UBERON:0004121!2.17e-18!169;UBERON:0003075!1.87e-17!86;UBERON:0007284!1.87e-17!86;UBERON:0000033!2.74e-17!123;UBERON:0000153!5.76e-17!129;UBERON:0007811!5.76e-17!129;UBERON:0007023!6.65e-16!115;UBERON:0001049!3.65e-15!57;UBERON:0005068!3.65e-15!57;UBERON:0006241!3.65e-15!57;UBERON:0007135!3.65e-15!57;UBERON:0000955!4.73e-15!69;UBERON:0006238!4.73e-15!69;UBERON:0000475!1.08e-14!365;UBERON:0002616!3.65e-14!59;UBERON:0000468!2.26e-13!659;UBERON:0000481!6.13e-12!347;UBERON:0003056!1.49e-11!61;UBERON:0000922!1.64e-10!612;UBERON:0003080!3.66e-10!42;UBERON:0002780!4.51e-10!41;UBERON:0001890!4.51e-10!41;UBERON:0006240!4.51e-10!41;UBERON:0002050!4.30e-09!605;UBERON:0005423!4.30e-09!605;UBERON:0000923!8.93e-09!604;UBERON:0005291!8.93e-09!604;UBERON:0006598!8.93e-09!604;UBERON:0002532!8.93e-09!604;UBERON:0002020!1.07e-08!34;UBERON:0003528!1.07e-08!34;UBERON:0000467!2.27e-08!625;UBERON:0000480!3.28e-08!626;UBERON:0001893!4.08e-08!34;UBERON:0001869!4.19e-08!32;UBERON:0000062!5.21e-08!511;UBERON:0002791!6.20e-08!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.62e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.63e-15,89;UBERON:0004121,1.80e-14,171;UBERON:0000924,1.80e-14,171;UBERON:0006601,1.80e-14,171;UBERON:0001017,6.17e-14,81;UBERON:0002346,4.37e-13,86;UBERON:0003075,8.67e-12,82;UBERON:0007284,8.67e-12,82;UBERON:0007023,7.27e-10,114;UBERON:0011216,8.22e-10,223;UBERON:0001049,1.14e-09,56;UBERON:0005068,1.14e-09,56;UBERON:0006241,1.14e-09,56;UBERON:0007135,1.14e-09,56;UBERON:0010314,1.57e-08,132;UBERON:0000955,2.18e-08,68;UBERON:0006238,2.18e-08,68;UBERON:0000073,3.41e-08,53;UBERON:0002616,3.41e-08,53;UBERON:0010371,2.26e-07,104;UBERON:0003056,3.64e-07,61;UBERON:0000479,8.75e-07,773 | |||
|phase1_expression=1.2717486548939,0.856402095563933,0.845726424575827,0,0.446961094427288,1.74467704820074,0,1.89515962028049,0.783556884599516,0.982935746006035,0,0,0.263766978228454,0.37129905888014,0.662794751455832,0.672325146451775,0,0.730310090387373,0.487932798790507,0.369363174230364,0.408001382488506,1.88072832886853,1.43117993565528,2.18999080116615,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.767175371061182,1.44575660953827,0,1.15877215168659,6.36228757640879,1.94653948121054,1.32348744029695,0.443458794925128,1.14185221401064,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.267899184852239,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.759783069987479,0.926864265692532,2.29469296599051,0,0.560677600142307,0,0.98667019366864,0.622422070799533,0.269421344139376,0.326923806226917,1.05950199351452,1.15235184896,0.468642863667593,0.936480230490962,0.570471821544449,0.298897361103602,0.822041490506354,1.45685649931318,0.421352420106746,0.408308342509787,0.737005903870608,0.826606249406124,1.18800285728205,0.989067717114227,0,0,0.841680569770331,1.37630371859161,1.93944880838928,1.75591048352335,0.30648779579902,1.80285670687916,0.453728732640084,0.89694817844431,1.06778694409284,1.48352330811693,0.300091096084402,1.13357782162283,1.8034837803194,1.11670113798954,1.18143432568886,0.584622030967192,1.7670364197088,1.93304787148829,0.323292113637624,1.06502877754984,0.806016785821122,0.847802961552438,0,0.272746120590835,0,0.487894824518382,0.530119073285941,1.85910308591229,1.34759371519982,0.252320850875628,0.36497735907583,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.614942192715568,1.20097467208968,0.109750285408626,0,0.100528972411631,1.85176890317059,0,0,1.44331342025273,1.04337364477569,1.17408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0.380987365753014,0.763976851116555,0,0,0.205654985406647,0,0.285826432630578,0.897048674762886,0.43596006883328,0.4400297149257,1.29271715757778,0,0,1.86156681609409,1.04007436911366,0,1.41849132023278,0.532844358032199,0.714889968290738,0.542621605391443,0,1.30294473717494,1.06617584622764,1.58390374586686,0.301439377059586,0,0,1.2162378064119,0,0,0.958499421966331,3.44585807502342,0,1.59259437334337,1.02738161275192,1.61154866915906,0,0.197030760201927,0,0,4.8277978602268,10.4111883086097,10.05275456611,6.70065061337395,6.37938751653163,0,0,0,1.71768088406796,0.500170521059677,0.271265023699736,0.415941723061614,0.356857977594324,0.315404830067869,0.468565659970853,1.50473049863859,0,0,1.99267679560631,0.553107505625109,1.39013783148933,0.391602314925481,0,0,0,0,0.606255142892519,0,0.604780586659361,0.248107807818777,0.61384789315225,0.561320188866147,1.15325234330131,1.02341449813341,0.965123526861645,0,1.3878872442239,1.06537035187876,1.47828880824856,1.03850885836724,0.581051892299796,2.1754700926492,0,0.368323955743585,0.918515585316854,1.27463817604702,1.04899531967539,0,0.693138033939733,0,0,0.844413031143006,0,0,0.647747748306418,0,0.541892875087706,0.501689773854853,0.764628819135115,0,0.223874754722178,0,0,1.02580050046556,0.328014645699706,3.25378394664303,1.44257416306811,1.92295876118521,0.907604499126468,0,0,1.6068392984416,1.83674364755032,1.23238893691716,0.921022048356777,1.37836572484531,0.644521469209642,1.16013355131383,1.78975917573812,1.4245125703478,0,0.192190067365106,0.255225424989168,0,0,0,1.3940745403212,0,0,0,0,0.143124886741991,0.744316738719335,0.316379424718726,0.190630193923825,0.767693373934002,0.855877976067841,0.318203247925937,0,1.61885211824983,0.54907405947211,1.06031162111118,0,0,0,0.975267478179181,0.487426979262569,0,0.545999645631943,0.141405431953713,1.13008116620243,0,0,0,0,1.31178950409327,0,0,0,0.430234056612155,0.294747123039363,0,1.06428319221179,1.05553817648832,0,0.75894634753143,1.04980416073495,0,0.670302275535787,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,3.31154620495167,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.894704431569664,0.834245708559542,0,0,0,0,0,0,0,1.02555725490326,0.121360521749513,0,0,0,0.593929361665277,0.307160702099232,1.9882952955326,0.984685914873589,0.222617410045812,0,2.32237948940793,3.78571177677032,1.10513566212459,0,0,0,0.622079175323615,0,0,0,3.45251919729268,0,0,0.969332746095218,0.834912883456661,3.99227596002388,0,0,0.724999575434793,0,0,0.236387681767936,0.344743373241465,0,1.90987494426621,3.54296554325536,5.90922549264499,1.52581736317083,2.76448149828062,1.77328571372128,1.97446857438575,0,0,5.00176680274681,0,0,0.448788222048861,0.325942115766024,0.31900115973192,1.4655614944298,0,0,0,0,0,0,0,0,0,0,2.44849212238722,0.706765357169704,3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| |||
|short_description=p3@PYGO1 | |||
}} |
Revision as of 23:42, 11 January 2014
Short description: | p3@PYGO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PYGO1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000302000_5end |
EntrezGene: | PYGO1 |
HGNC: | 30256 |
UniProt: | Q9Y3Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.63e-15 | 89 |
ectoderm-derived structure | 1.80e-14 | 171 |
ectoderm | 1.80e-14 | 171 |
presumptive ectoderm | 1.80e-14 | 171 |
central nervous system | 6.17e-14 | 81 |
neurectoderm | 4.37e-13 | 86 |
neural plate | 8.67e-12 | 82 |
presumptive neural plate | 8.67e-12 | 82 |
adult organism | 7.27e-10 | 114 |
organ system subdivision | 8.22e-10 | 223 |
neural tube | 1.14e-09 | 56 |
neural rod | 1.14e-09 | 56 |
future spinal cord | 1.14e-09 | 56 |
neural keel | 1.14e-09 | 56 |
structure with developmental contribution from neural crest | 1.57e-08 | 132 |
brain | 2.18e-08 | 68 |
future brain | 2.18e-08 | 68 |
regional part of nervous system | 3.41e-08 | 53 |
regional part of brain | 3.41e-08 | 53 |
ecto-epithelium | 2.26e-07 | 104 |
pre-chordal neural plate | 3.64e-07 | 61 |
tissue | 8.75e-07 | 773 |