FFCP PHASE1:Hg19::chr15:48937953..48937964,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3603 | |||
|TSSclassifier=strong | |||
|UniProt=F8W7L2,F5H2N7,D2JYH6,P35555 | |||
|association_with_transcript=20bp_to_ENST00000389087,ENST00000544030,NM_000138_5end | |||
|description=CAGE_peak_6_at_FBN1_5end | |||
|id=chr15:48937953..48937964,- | |||
|ontology_enrichment_celltype=CL:0000055!1.63e-27!180;CL:0000057!3.83e-19!75;CL:0000680!2.13e-12!57;CL:0000056!2.13e-12!57;CL:0000355!2.13e-12!57;CL:0000187!9.50e-12!54;CL:0000183!1.30e-11!59;CL:0000222!4.72e-11!119;CL:0000192!1.54e-09!42;CL:0000514!1.54e-09!42;CL:0000393!6.56e-09!60;CL:0000211!6.56e-09!60;CL:0002620!1.32e-08!23;CL:0000359!1.02e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.89e-10;23!CL:0000134;8.78e-09;55!CL:0000048;7.64e-08;58!CL:0000723;3.73e-07;61!CL:0000349;7.45e-07;19!CL:0000057;8.09e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.53e-16,76;CL:0000048,7.28e-14,427;CL:0000723,2.86e-13,433;CL:0000034,1.65e-12,441;CL:0002620,1.43e-09,23;CL:0000187,8.98e-09,55;CL:0000192,1.71e-08,43;CL:0000514,1.71e-08,43;CL:0000134,5.06e-08,354;CL:0000680,5.49e-08,58;CL:0000056,5.49e-08,58;CL:0000355,5.49e-08,58;CL:0002320,5.82e-08,361;CL:0000393,2.75e-07,61;CL:0000211,2.75e-07,61;CL:0000219,5.52e-07,386;CL:1000306,6.19e-07,4;CL:0002547,6.19e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.86e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.13e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.02e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.29e-13!83;UBERON:0002329!1.29e-13!83;UBERON:0003077!1.29e-13!83;UBERON:0003059!1.29e-13!83;UBERON:0007282!1.29e-13!83;UBERON:0009618!1.29e-13!83;UBERON:0007285!1.29e-13!83;UBERON:0002385!7.76e-13!63;UBERON:0001015!7.76e-13!63;UBERON:0000383!7.76e-13!63;UBERON:0002049!8.39e-13!79;UBERON:0007798!8.39e-13!79;UBERON:0001134!1.18e-12!61;UBERON:0002036!1.18e-12!61;UBERON:0003082!1.18e-12!61;UBERON:0004872!7.79e-12!84;UBERON:0004290!1.96e-11!70;UBERON:0004535!6.68e-10!110;UBERON:0001009!9.27e-10!113;UBERON:0005256!1.30e-09!143;UBERON:0000486!2.15e-09!82;UBERON:0000055!3.28e-09!69;UBERON:0001981!1.62e-08!60;UBERON:0007500!1.62e-08!60;UBERON:0004537!1.62e-08!60;UBERON:0006965!1.62e-08!60;UBERON:0000475!2.45e-08!365;UBERON:0000481!4.76e-07!347;UBERON:0003914!7.59e-07!118;UBERON:0000477!8.92e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.77e-07;9!UBERON:0000042;4.77e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.21e-08,62;UBERON:0002036,1.21e-08,62;UBERON:0003082,1.21e-08,62;UBERON:0002385,3.71e-08,64;UBERON:0001015,3.71e-08,64;UBERON:0000383,3.71e-08,64;UBERON:0002384,5.50e-08,371;UBERON:0002049,3.35e-07,78;UBERON:0007798,3.35e-07,78;UBERON:0007524,5.18e-07,73;UBERON:0004535,5.52e-07,109;UBERON:0000415,6.19e-07,4;UBERON:0007240,6.19e-07,4;UBERON:0005742,6.19e-07,4;UBERON:0005734,6.19e-07,4;UBERON:0004664,6.19e-07,4;UBERON:0004663,6.19e-07,4;UBERON:0004872,6.51e-07,83;UBERON:0007503,9.76e-07,78 | |||
|phase1_expression=0.54503513781167,1.71280419112787,1.40954404095971,0,1.34088328328186,0,0,1.26343974685366,0.261185628199839,0,0,1.52908960491121,0.263766978228454,0.866364470720326,3.31397375727916,1.34465029290355,0,0.730310090387373,0,0.492484232307152,1.02000345622126,0.626909442956176,0.286235987131057,0.273748850145768,1.00434111675842,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0,0.511450247374121,1.80719576192283,1.00267582127178,1.73815822752988,0.795285947051099,0,1.41802225746102,1.33037638477538,1.93236528524877,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0,0,0,2.51699661725944,0.275118041940067,0,0.775250277507987,0,0.33472061276467,0.402829317109147,0,0.488124115096339,0,0,0.714397826272638,0.673588117878509,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,1.49091585508596,1.8994576749687,3.57504788195691,8.03142538096678,1.41867352879343,0.560677600142307,0,1.48000529050296,3.11211035399766,0.808264032418128,1.47115712802113,1.36221684880438,1.15235184896,0.937285727335186,0.312160076830321,0,0.298897361103602,0.822041490506354,0.485618833104395,0.561803226808994,1.83738754129404,0.491337269247072,0.929932030581889,0,0.741800787835671,0.910161361938026,1.43723628363248,1.34668891163253,1.00094815897571,0.554128230968366,0.438977620880838,0.919463387397059,2.55404700141215,0.340296549480063,5.74046834204358,2.13557388818567,0.211931901159562,7.50227740211006,1.03052529238439,3.86460810068444,1.11670113798954,3.20675031258406,1.07180705677318,3.5340728394176,1.84099797284599,1.77810662500693,6.03516307278244,1.20902517873168,1.3564847384839,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0.241011029883482,0.220587945464788,0,0.237270619111097,0,0,0.769494313892781,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0.857839051492628,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0.579652024875384,3.28744343860301,0.577465791044295,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0,0.358234090811393,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0.224262168690721,1.30788020649984,0.2933531432838,1.29271715757778,0,0,1.06375246633948,0,0.257207374262142,0,0.532844358032199,1.28680194292333,1.08524321078289,0,0,1.42156779497018,0,1.50719688529793,0,2.7992437530976,0,0,0,1.4377491329495,2.29723871668228,0,0.868687840005475,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0.542530047399471,1.66376689224646,0.892144943985809,0.630809660135739,0.702848489956279,2.10662269809403,0,0,1.99267679560631,0.737476674166813,1.39013783148933,0.783204629850962,0,0,0,0,0.303127571446259,0,0.30239029332968,0.744323423456331,2.76231551918512,2.24528075546459,1.02511319404561,1.02341449813341,1.76939313257968,0,0.462629081407967,0.887808626565635,1.23190734020714,0.519254429183621,0.929683027679674,0,0.200506470303285,0,1.14814448164607,0.546273504020151,0.917870904715969,0,0.231046011313244,0.784349769176855,0,0.527758144464379,0,0.170093705276516,1.0795795805107,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0.769350375349168,0.984043937099117,0,0.309123034943167,0.27470839445503,0.082509499920588,0,0,3.21367859688319,0.96670718292122,0.616194468458578,0.767518373630648,0.689182862422653,0.859361958946189,1.74020032697074,1.02271952899321,1.33548053470106,0.165284915360978,0,0,0,0,5.03699754929024,1.3940745403212,12.9374103673957,1.06461206063404,0.869932992075073,1.48259375283136,0.572499546967965,1.116475108079,1.58189712359363,0.953150969619124,0.255897791311334,0.42793898803392,1.59101623962968,0,1.61885211824983,1.37268514868027,1.17812402345686,0.606547444719948,1.58510321173008,2.52755073743389,0,0.974853958525138,0,1.22849920267187,1.27264888758341,2.26016233240486,1.65409603063837,1.32687795048244,0.438450885253763,0,1.31178950409327,0.405820753925408,0.30982349809975,0.281695602532241,0.286822704408103,0.785992328104969,0.7133421029625,1.06428319221179,5.48879851773927,3.62224382255892,0,0.699869440489966,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0.962479855263359,0,0,0,0.213425530045242,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0.879049075631364,0.36408156524854,0,0,1.90995587790152,1.18785872333055,2.45728561679386,0,0,0.667852230137435,0.16480387422676,0.211125408127993,0.796991953004279,0.552567831062295,0,0.920418142519393,0.246169610922139,1.86623752597084,0,0,0,0.789147245095469,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.868124974666461,0.885741385813839,0.120596438625408,0,0,0,0,0,0,1.00035336054936,1.02547850262301,0,0,0.434589487688032,2.23300811812344,0.7327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| |||
|short_description=p6@FBN1 | |||
}} |
Revision as of 23:25, 11 January 2014
Short description: | p6@FBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000389087, ENST00000544030, NM_000138_5end |
EntrezGene: | FBN1 |
HGNC: | 3603 |
UniProt: | F8W7L2F5H2N7D2JYH6P35555 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.53e-16 | 76 |
multi fate stem cell | 7.28e-14 | 427 |
somatic stem cell | 2.86e-13 | 433 |
stem cell | 1.65e-12 | 441 |
skin fibroblast | 1.43e-09 | 23 |
muscle cell | 8.98e-09 | 55 |
smooth muscle cell | 1.71e-08 | 43 |
smooth muscle myoblast | 1.71e-08 | 43 |
mesenchymal cell | 5.06e-08 | 354 |
muscle precursor cell | 5.49e-08 | 58 |
myoblast | 5.49e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.49e-08 | 58 |
connective tissue cell | 5.82e-08 | 361 |
electrically responsive cell | 2.75e-07 | 61 |
electrically active cell | 2.75e-07 | 61 |
motile cell | 5.52e-07 | 386 |
fibroblast of tunica adventitia of artery | 6.19e-07 | 4 |
fibroblast of the aortic adventitia | 6.19e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.21e-08 | 62 |
striated muscle tissue | 1.21e-08 | 62 |
myotome | 1.21e-08 | 62 |
muscle tissue | 3.71e-08 | 64 |
musculature | 3.71e-08 | 64 |
musculature of body | 3.71e-08 | 64 |
connective tissue | 5.50e-08 | 371 |
vasculature | 3.35e-07 | 78 |
vascular system | 3.35e-07 | 78 |
dense mesenchyme tissue | 5.18e-07 | 73 |
cardiovascular system | 5.52e-07 | 109 |
artery wall | 6.19e-07 | 4 |
tunica adventitia of artery | 6.19e-07 | 4 |
adventitia | 6.19e-07 | 4 |
tunica adventitia of blood vessel | 6.19e-07 | 4 |
aorta tunica adventitia | 6.19e-07 | 4 |
aorta wall | 6.19e-07 | 4 |
splanchnic layer of lateral plate mesoderm | 6.51e-07 | 83 |
epithelial vesicle | 9.76e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.02e-08 | 14 |