FFCP PHASE1:Hg19::chr15:34630146..34630232,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10914 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENST00000558667,ENST00000559236,ENST00000561080,ENST00000561120_5end | |||
|description=CAGE_peak_2_at_SLC12A6_5end | |||
|id=chr15:34630146..34630232,- | |||
|ontology_enrichment_celltype=CL:0002087!2.33e-21!119;CL:0000738!4.24e-20!140;CL:0000037!5.26e-20!172;CL:0000566!5.26e-20!172;CL:0002031!4.68e-19!124;CL:0002032!1.24e-18!165;CL:0000837!1.24e-18!165;CL:0000988!5.17e-18!182;CL:0002057!3.17e-17!42;CL:0000766!1.47e-16!76;CL:0000860!7.67e-16!45;CL:0002194!1.32e-14!63;CL:0000576!1.32e-14!63;CL:0000040!1.32e-14!63;CL:0000559!1.32e-14!63;CL:0000839!5.39e-14!70;CL:0002009!4.21e-13!65;CL:0000763!2.85e-12!112;CL:0000049!2.85e-12!112;CL:0000557!2.96e-12!71;CL:0000791!8.78e-08!18;CL:0000789!8.78e-08!18;CL:0002420!8.78e-08!18;CL:0002419!8.78e-08!18;CL:0000790!8.78e-08!18;CL:0000838!4.58e-07!52;CL:0002320!5.35e-07!365;CL:0000134!7.47e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-17;33!CL:0002057;1.19e-17;33!CL:0000473;1.11e-14;39!CL:0000234;1.11e-14;39!CL:0000576;2.46e-10;48!CL:0000766;3.02e-08;69!CL:0000791;6.81e-08;18!CL:0000789;6.81e-08;18!CL:0002419;6.81e-08;18!CL:0002087;2.85e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.82e-22,115;CL:0000738,7.58e-21,136;CL:0000037,1.28e-20,168;CL:0002031,8.04e-20,120;CL:0002032,3.11e-19,161;CL:0000837,3.11e-19,161;CL:0000988,1.94e-18,177;CL:0000766,1.15e-17,72;CL:0000860,3.13e-17,42;CL:0002057,3.13e-17,42;CL:0000473,4.24e-17,48;CL:0000234,4.24e-17,48;CL:0002194,8.89e-16,59;CL:0000576,8.89e-16,59;CL:0000040,8.89e-16,59;CL:0000559,8.89e-16,59;CL:0000839,5.13e-15,66;CL:0002009,4.29e-14,61;CL:0000557,4.12e-13,67;CL:0000763,7.25e-13,108;CL:0000049,7.25e-13,108;CL:0000791,8.74e-08,18;CL:0000789,8.74e-08,18;CL:0002420,8.74e-08,18;CL:0002419,8.74e-08,18;CL:0000790,8.74e-08,18;CL:0002320,3.86e-07,361;CL:0000838,4.56e-07,52;CL:0000134,5.39e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.62e-13;42!CL:0000790;6.81e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-21!115;UBERON:0002193!2.43e-16!112;UBERON:0002390!4.07e-16!102;UBERON:0003061!4.07e-16!102;UBERON:0001049!7.95e-15!57;UBERON:0005068!7.95e-15!57;UBERON:0006241!7.95e-15!57;UBERON:0007135!7.95e-15!57;UBERON:0002616!2.16e-13!59;UBERON:0002780!6.67e-13!41;UBERON:0001890!6.67e-13!41;UBERON:0006240!6.67e-13!41;UBERON:0003080!1.74e-12!42;UBERON:0002371!7.30e-12!80;UBERON:0000955!1.08e-11!69;UBERON:0006238!1.08e-11!69;UBERON:0001893!2.99e-11!34;UBERON:0002020!6.30e-11!34;UBERON:0003528!6.30e-11!34;UBERON:0002791!9.57e-11!33;UBERON:0003081!1.29e-10!216;UBERON:0001869!2.01e-10!32;UBERON:0001474!3.76e-10!86;UBERON:0001017!5.47e-10!82;UBERON:0005743!3.94e-09!86;UBERON:0004765!5.32e-09!101;UBERON:0001434!5.32e-09!101;UBERON:0002619!5.45e-09!22;UBERON:0001950!1.09e-08!20;UBERON:0000956!4.75e-08!25;UBERON:0000203!4.75e-08!25;UBERON:0000073!7.71e-08!94;UBERON:0001016!7.71e-08!94;UBERON:0003075!2.81e-07!86;UBERON:0007284!2.81e-07!86;UBERON:0002346!7.12e-07!90;UBERON:0002405!7.60e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.98e-10;34!UBERON:0002780;2.00e-09;41!UBERON:0001890;2.00e-09;41!UBERON:0003528;2.82e-09;34!UBERON:0002020;2.82e-09;34!UBERON:0001869;2.98e-09;32!UBERON:0002791;3.41e-09;32!UBERON:0002619;5.88e-09;22!UBERON:0000073;6.18e-09;53!UBERON:0002616;6.18e-09;53!UBERON:0001950;1.24e-08;20!UBERON:0000956;5.13e-08;25!UBERON:0000203;5.13e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.15e-21,114;UBERON:0002193,4.41e-17,108;UBERON:0002390,7.06e-17,98;UBERON:0003061,7.06e-17,98;UBERON:0001049,3.31e-15,56;UBERON:0005068,3.31e-15,56;UBERON:0006241,3.31e-15,56;UBERON:0007135,3.31e-15,56;UBERON:0000073,2.20e-14,53;UBERON:0002616,2.20e-14,53;UBERON:0002405,4.26e-14,93;UBERON:0002780,6.62e-13,41;UBERON:0001890,6.62e-13,41;UBERON:0003080,6.62e-13,41;UBERON:0006240,6.62e-13,41;UBERON:0002371,1.31e-12,76;UBERON:0003081,1.66e-12,203;UBERON:0000955,6.07e-12,68;UBERON:0006238,6.07e-12,68;UBERON:0001893,2.97e-11,34;UBERON:0003528,6.26e-11,34;UBERON:0002020,6.26e-11,34;UBERON:0001474,9.37e-11,82;UBERON:0001869,1.99e-10,32;UBERON:0002791,2.84e-10,32;UBERON:0001017,3.53e-10,81;UBERON:0004765,1.14e-09,90;UBERON:0001434,1.33e-09,100;UBERON:0002619,5.42e-09,22;UBERON:0001950,1.09e-08,20;UBERON:0001016,1.18e-08,89;UBERON:0000956,4.73e-08,25;UBERON:0000203,4.73e-08,25;UBERON:0003075,4.93e-08,82;UBERON:0007284,4.93e-08,82;UBERON:0002346,1.42e-07,86 | |||
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| |||
|short_description=p2@SLC12A6 | |||
}} |
Revision as of 22:44, 11 January 2014
Short description: | p2@SLC12A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC12A6_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000558667, ENST00000559236, ENST00000561080, ENST00000561120_5end |
EntrezGene: | SLC12A6 |
HGNC: | 10914 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.15e-21 | 114 |
hemolymphoid system | 4.41e-17 | 108 |
hematopoietic system | 7.06e-17 | 98 |
blood island | 7.06e-17 | 98 |
neural tube | 3.31e-15 | 56 |
neural rod | 3.31e-15 | 56 |
future spinal cord | 3.31e-15 | 56 |
neural keel | 3.31e-15 | 56 |
regional part of nervous system | 2.20e-14 | 53 |
regional part of brain | 2.20e-14 | 53 |
immune system | 4.26e-14 | 93 |
regional part of forebrain | 6.62e-13 | 41 |
forebrain | 6.62e-13 | 41 |
anterior neural tube | 6.62e-13 | 41 |
future forebrain | 6.62e-13 | 41 |
bone marrow | 1.31e-12 | 76 |
lateral plate mesoderm | 1.66e-12 | 203 |
brain | 6.07e-12 | 68 |
future brain | 6.07e-12 | 68 |
telencephalon | 2.97e-11 | 34 |
brain grey matter | 6.26e-11 | 34 |
gray matter | 6.26e-11 | 34 |
bone element | 9.37e-11 | 82 |
cerebral hemisphere | 1.99e-10 | 32 |
regional part of telencephalon | 2.84e-10 | 32 |
central nervous system | 3.53e-10 | 81 |
skeletal element | 1.14e-09 | 90 |
skeletal system | 1.33e-09 | 100 |
regional part of cerebral cortex | 5.42e-09 | 22 |
neocortex | 1.09e-08 | 20 |
nervous system | 1.18e-08 | 89 |
cerebral cortex | 4.73e-08 | 25 |
pallium | 4.73e-08 | 25 |
neural plate | 4.93e-08 | 82 |
presumptive neural plate | 4.93e-08 | 82 |
neurectoderm | 1.42e-07 | 86 |