FFCP PHASE1:Hg19::chr14:106332518..106332527,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_at_chr14:106332518..106332527,- | |||
|id=chr14:106332518..106332527,- | |||
|ontology_enrichment_celltype=CL:0000784!1.55e-21!3;CL:0000236!6.43e-18!14;CL:0000945!3.12e-10!24;CL:0000826!3.12e-10!24;CL:0000842!7.46e-10!3;CL:0000819!9.79e-09!1;CL:0001024!1.05e-08!1;CL:0000224!1.33e-07!4;CL:0000037!2.93e-07!172;CL:0000566!2.93e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.29e-34;13!CL:0000785;8.94e-20;1!CL:0000819;8.94e-20;1!CL:0000037;1.08e-19;1!CL:0001024;1.08e-19;1!CL:0002032;2.97e-19;1!CL:0000557;2.97e-19;1!CL:0000945;7.32e-19;24!CL:0000542;4.13e-08;53!CL:0000784;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.43e-32,14;CL:0000819,8.95e-20,1;CL:0001024,1.08e-19,1;CL:0000945,8.19e-19,24;CL:0000826,8.19e-19,24;CL:0000785,1.43e-10,2;CL:0000955,1.43e-10,2;CL:0000818,1.43e-10,2;CL:0000954,1.43e-10,2;CL:0000816,1.43e-10,2;CL:0000037,5.07e-10,168;CL:0000988,1.77e-09,177;CL:0000838,9.77e-09,52;CL:0000542,1.43e-08,53;CL:0000051,1.43e-08,53;CL:0000817,1.82e-07,3;CL:0000784,2.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;1.43e-10;2!CL:0000051;4.13e-08;53 | |||
|ontology_enrichment_disease=DOID:0060073!9.79e-09!1;DOID:8675!9.79e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:0060073;8.94e-20;1!DOID:8675;8.94e-20;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,8.95e-20,1;DOID:8675,8.95e-20,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.15e-10!3;UBERON:0004854!2.15e-10!3;UBERON:0009034!2.15e-10!3;UBERON:0002095!2.15e-10!3;UBERON:0004782!2.15e-10!3;UBERON:0003281!2.15e-10!3;UBERON:0009664!2.15e-10!3;UBERON:0002296!2.15e-10!3;UBERON:0005602!2.15e-10!3;UBERON:0001179!2.15e-10!3;UBERON:0006293!2.15e-10!3;UBERON:0004177!1.67e-09!7;UBERON:0001154!3.57e-08!1;UBERON:0001153!3.57e-08!1;UBERON:0002372!3.83e-08!1;UBERON:0001961!3.83e-08!1;UBERON:0001744!3.83e-08!1;UBERON:0001735!3.83e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.71e-07;3!UBERON:0002371;5.39e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.19e-07,3;UBERON:0004854,2.19e-07,3;UBERON:0009034,2.19e-07,3;UBERON:0002095,2.19e-07,3;UBERON:0004782,2.19e-07,3;UBERON:0003281,2.19e-07,3;UBERON:0009664,2.19e-07,3;UBERON:0002296,2.19e-07,3;UBERON:0005602,2.19e-07,3;UBERON:0001179,2.19e-07,3;UBERON:0006293,2.19e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,3.52320527201817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0,0.574752439954483,1.32208974556972,0,1.1384259382189,0,1.52909291250092,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,1.39705560002972,0,0,0,0,0,0,0,2.53937666702405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85255861764596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,1.86927875123374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.248298857183432,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:106332518..106332527,- | |||
}} |
Revision as of 22:22, 11 January 2014
Short description: | p@chr14:106332518..106332527, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106332518..106332527, - |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.43e-32 | 14 |
B-1 B cell | 8.95e-20 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.08e-19 | 1 |
lymphocyte of B lineage | 8.19e-19 | 24 |
pro-B cell | 8.19e-19 | 24 |
mature B cell | 1.43e-10 | 2 |
pre-B-II cell | 1.43e-10 | 2 |
transitional stage B cell | 1.43e-10 | 2 |
small pre-B-II cell | 1.43e-10 | 2 |
immature B cell | 1.43e-10 | 2 |
hematopoietic stem cell | 5.07e-10 | 168 |
hematopoietic cell | 1.77e-09 | 177 |
lymphoid lineage restricted progenitor cell | 9.77e-09 | 52 |
lymphocyte | 1.43e-08 | 53 |
common lymphoid progenitor | 1.43e-08 | 53 |
precursor B cell | 1.82e-07 | 3 |
plasmacytoid dendritic cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.19e-07 | 3 |
gastrointestinal system mesentery | 2.19e-07 | 3 |
stomach region | 2.19e-07 | 3 |
mesentery | 2.19e-07 | 3 |
gastrointestinal system serosa | 2.19e-07 | 3 |
mesentery of stomach | 2.19e-07 | 3 |
gut mesentery | 2.19e-07 | 3 |
dorsal mesentery | 2.19e-07 | 3 |
dorsal mesogastrium | 2.19e-07 | 3 |
peritoneal cavity | 2.19e-07 | 3 |
spleen primordium | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 8.95e-20 | 1 |
lymphosarcoma | 8.95e-20 | 1 |