FFCP PHASE1:Hg19::chr14:96000839..96000849,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27510 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-257bp_to_ENST00000554169_5end | |||
|coexpression_cluster_id=C3467 | |||
|description=CAGE_peak_9_at_SNHG10_5end | |||
|id=chr14:96000839..96000849,- | |||
|ontology_enrichment_celltype=CL:0000945!7.95e-11!24;CL:0000826!7.95e-11!24;CL:0000542!3.43e-07!53;CL:0000051!3.43e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.80e-22;24!CL:0000236;5.78e-14;13!CL:0000817;9.91e-13;1!CL:0002032;1.18e-12;1!CL:0000785;1.18e-12;1!CL:0000557;1.18e-12;1!CL:0000819;1.18e-12;1!CL:0000542;7.40e-08;53!CL:0000123;8.76e-07;2!CL:0002561;8.76e-07;2!CL:0000242;8.76e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.25e-22,24;CL:0000826,8.25e-22,24;CL:0000817,4.63e-16,3;CL:0000236,6.35e-13,14;CL:0000819,1.25e-12,1;CL:0000542,2.12e-12,53;CL:0000051,2.12e-12,53;CL:0000838,9.66e-10,52;CL:0002032,3.66e-08,161;CL:0000837,3.66e-08,161;CL:0000037,9.44e-08,168;CL:0000988,2.86e-07,177;CL:0000785,6.07e-07,2;CL:0000955,6.07e-07,2;CL:0000818,6.07e-07,2;CL:0000954,6.07e-07,2;CL:0000816,6.07e-07,2;CL:0002561,7.20e-07,2;CL:0000242,8.06e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;7.40e-08;53!CL:0000954;5.89e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!6.27e-09!51;DOID:0060083!6.27e-09!51;DOID:0060058!5.58e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.18e-12;1!DOID:8675;1.18e-12;1!DOID:4960;2.60e-12;1!DOID:0070004;2.60e-12;1!DOID:12603;2.60e-12;1!DOID:2531;4.77e-08;51!DOID:0060083;4.77e-08;51!DOID:1240;1.66e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.80e-13,51;DOID:0060083,3.80e-13,51;DOID:0060073,1.25e-12,1;DOID:8675,1.25e-12,1;DOID:4960,1.40e-12,1;DOID:0070004,1.40e-12,1;DOID:12603,2.46e-12,1;DOID:1240,3.92e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;8.76e-07;2!UBERON:0005942;8.76e-07;2!UBERON:0005932;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,7.20e-07,2;UBERON:0005942,7.20e-07,2;UBERON:0005932,7.20e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0.61130724598361,1.23150884174919,0.629686250509434,0,0,0,0,0,0,1.16200800870452,0.284338464974843,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,1.28019066769952,0,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0.526768169550154,0,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0,0,0.443067789167242,0,0.25618263945135,0.390178042679635,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0.236613600079688,0,0.482022059766964,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0.232420756919918,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0.154048617114644,0.614014698904518,0.137836572484531,0.107420244868274,0,0.340906509664404,0.178064071293475,0,0,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0.563391205064483,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,1.30062222588003,4.03953796334046,0,0.159426272728822,0.199579371432817,0.191505370132367,0,0,0,5.47763229679661,0.313359791546046,5.01268954180134,0,0.321176150207399,0.201799707191048,0,0,0,0.223676107892416,0.333698283423817,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,1.56980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.370691816839509,0.730953646538188,0,0,0,2.18945747058799,0,0.242780379534093,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0.288950589901519,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.211200673038813,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0.340776043570843,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0,1.30428925749743,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0.310874401165561,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0.39997479170986,0.426766918776564,1.89436477626897,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0.123935764259002,0,0.318004350653419,8.75365369513912,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0.20170506870352,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0.109940516745429,0,0,0,0.470317296361523,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.128915775947154,0.199882311849858,0,0.352894871715692,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0.275684698604535,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p9@SNHG10 | |||
}} |
Revision as of 21:47, 11 January 2014
Short description: | p9@SNHG10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SNHG10_5end |
Coexpression cluster: | C3467_acute_non_diffuse_chronic_myeloma_merkel_B |
Association with transcript: | -257bp_to_ENST00000554169_5end |
EntrezGene: | NA |
HGNC: | 27510 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.25e-22 | 24 |
pro-B cell | 8.25e-22 | 24 |
precursor B cell | 4.63e-16 | 3 |
B cell | 6.35e-13 | 14 |
B-1 B cell | 1.25e-12 | 1 |
lymphocyte | 2.12e-12 | 53 |
common lymphoid progenitor | 2.12e-12 | 53 |
lymphoid lineage restricted progenitor cell | 9.66e-10 | 52 |
hematopoietic oligopotent progenitor cell | 3.66e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.66e-08 | 161 |
hematopoietic stem cell | 9.44e-08 | 168 |
hematopoietic cell | 2.86e-07 | 177 |
mature B cell | 6.07e-07 | 2 |
pre-B-II cell | 6.07e-07 | 2 |
transitional stage B cell | 6.07e-07 | 2 |
small pre-B-II cell | 6.07e-07 | 2 |
immature B cell | 6.07e-07 | 2 |
outer root sheath cell | 7.20e-07 | 2 |
Merkel cell | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 7.20e-07 | 2 |
hair outer root sheath | 7.20e-07 | 2 |
bulb of hair follicle | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.80e-13 | 51 |
immune system cancer | 3.80e-13 | 51 |
lymphatic system cancer | 1.25e-12 | 1 |
lymphosarcoma | 1.25e-12 | 1 |
bone marrow cancer | 1.40e-12 | 1 |
myeloma | 1.40e-12 | 1 |
acute leukemia | 2.46e-12 | 1 |
leukemia | 3.92e-07 | 39 |