FFCP PHASE1:Hg19::chr14:94640699..94640709,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57718 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23788 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=24bp_to_ENST00000328839_5end | |||
|coexpression_cluster_id=C3464 | |||
|description=CAGE_peak_3_at_PPP4R4_5end | |||
|id=chr14:94640699..94640709,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.71e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.45e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.48e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.92e-18!57;UBERON:0005068!2.92e-18!57;UBERON:0006241!2.92e-18!57;UBERON:0007135!2.92e-18!57;UBERON:0001017!1.80e-14!82;UBERON:0005743!1.91e-14!86;UBERON:0002616!1.19e-13!59;UBERON:0000955!1.47e-13!69;UBERON:0006238!1.47e-13!69;UBERON:0007023!7.79e-12!115;UBERON:0003075!9.55e-12!86;UBERON:0007284!9.55e-12!86;UBERON:0000033!1.08e-11!123;UBERON:0000073!1.14e-11!94;UBERON:0001016!1.14e-11!94;UBERON:0003080!1.55e-11!42;UBERON:0000153!6.92e-11!129;UBERON:0007811!6.92e-11!129;UBERON:0002780!8.72e-11!41;UBERON:0001890!8.72e-11!41;UBERON:0006240!8.72e-11!41;UBERON:0002346!1.28e-10!90;UBERON:0002020!1.88e-09!34;UBERON:0003528!1.88e-09!34;UBERON:0001893!5.83e-09!34;UBERON:0002791!1.26e-08!33;UBERON:0003076!1.97e-08!15;UBERON:0003057!1.97e-08!15;UBERON:0003056!2.38e-08!61;UBERON:0001869!4.05e-08!32;UBERON:0004121!1.38e-07!169;UBERON:0000924!4.80e-07!173;UBERON:0006601!4.80e-07!173;UBERON:0002619!5.86e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;1.45e-08;2!UBERON:0003022;1.45e-08;2!UBERON:0002421;1.45e-08;2!UBERON:0002600;1.45e-08;2!UBERON:0000349;2.24e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.03e-08,2;UBERON:0003022,1.03e-08,2;UBERON:0002421,1.03e-08,2;UBERON:0002600,1.03e-08,2;UBERON:0003076,2.17e-08,15;UBERON:0003057,2.17e-08,15;UBERON:0001049,2.37e-08,56;UBERON:0005068,2.37e-08,56;UBERON:0006241,2.37e-08,56;UBERON:0007135,2.37e-08,56;UBERON:0000349,1.23e-07,5 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,1.46062018077475,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,2.76997704265939,1.60435557976113,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.580418477257168,0.56738522469114,1.86846674698672,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,4.63432132846266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0.484938170456436,0,0,0,0.57978255948989,1.09098448236334,0.573609190778008,0,0.397589304964456,0,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.402115889646523,0.185176890317059,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.671928512795438,0.992425680696705,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,1.50719688529793,0,1.29964888536674,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0.306923946576125,0,0.128139149255701,1.53512174720011,0.160853921143607,0,0,0,0,0,0,0,0,0.460404944679482,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,1.15699440752685,2.11409074101617,2.67986696238627,1.4162089319777,0,0.94443704049192,0,0.308033580176089,0,0,0,0.572499546967965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,1.31717957183961,0,0.349934720244983,0.865999014529609,0,0,0.0941438007767792,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.320472213382419,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82870241333667,1.44701316529778,0,0.422250816255987,0.19924798825107,0,0.251932747854276,0,0,0.622079175323615,0.0898683511473268,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,1.44999915086959,1.82069517256799,0,0,0,0,0,0.885741385813839,0.482385754501632,1.52581736317083,0.774054819518572,1.77328571372128,0,0,0.975966209950223,0.615602068030377,1.13942055847001,0,0.0897576444097721,0,0.957003479195758,1.00757352742049,1.5991043280559,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0.296521128680622,0,0.208843899010911,0.269604531922708,0,0.937057782901357,0,0,0,0.394584402849391,0,0,0,2.1045278718029,0.103688191397247,1.32930774541437,1.65495977937749,0,0,0,0.138674673013139,0,1.86185555087318,2.08942095792966,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0.548167698587004,0.19871461170299,0.379864775735272,0,0,0,0,0,0.229073192331831,1.02956998717179,0,0,0,0,0.104602846312333,0,0,0,0.273810757783986,0,5.15718529703949,0,0,0,0,0,0,0,0,0.720599767084807,0,0.551482276150566,0.741742725430498,0.471824806979294,0.0984274815147488,0,1.59045937961861,1.36203406111576,0.964518890790115,0.275078873194468,0.83088067605837,0.2249738915515,0,0.971992906528395,0,0.157611414598396,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,1.0342636508924,0.52893040697076,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0.496166021811951,0,1.09613338542806,0.638341257770182,0,0,0,0,0,0.886068179966986,0.366078794705889,1.1267183763585,0,1.10929051536852,0.807253238237985,0,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0.521745061811734,2.25386413495828,0.761610424337591,0.406870733204662,0.181848659202559,0.429642228169954,0,0,0,0,0,1.26184898228651,0,1.50109113962448,0,0,0,0.244736704506468,0,0,0,0.883445729729405,0,0,0,0,0.303859956177382,1.24432592536558,0,0.132864840313363,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0.559518030877778,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0,0.615349092722265,0,0,0.968853873791107,0,0.294443155503077,0,1.65085738669511,0.577628330751691,0,2.7614397042404,0,0.526472298444801,0.40341013740704,0,0,0,0.295712172434091,0.135075169236789,0,0.413373593002368,0.317079050969534,0,0,0,0,0.638812138197976,0,0.336283722218824,0,0.455324382702595,0.0887023701626388,0.345701962667338,0,0.475788130837822,0.328863867814245,0,0,0,0.628462359664008,0.280272163313789,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,1.03608082081518,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0.549702583727146,0.150962843566674,0.0771741581079447,0,1.41095188908457,0,0,0.588925401344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| |||
|short_description=p3@PPP4R4 | |||
}} |
Revision as of 21:41, 11 January 2014
Short description: | p3@PPP4R4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPP4R4_5end |
Coexpression cluster: | C3464_Small_granulosa_Fibroblast_squamous_amygdala_thalamus_epidermoid |
Association with transcript: | 24bp_to_ENST00000328839_5end |
EntrezGene: | PPP4R4 |
HGNC: | 23788 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.03e-08 | 2 |
lobe parts of cerebral cortex | 1.03e-08 | 2 |
hippocampal formation | 1.03e-08 | 2 |
limbic lobe | 1.03e-08 | 2 |
posterior neural tube | 2.17e-08 | 15 |
chordal neural plate | 2.17e-08 | 15 |
neural tube | 2.37e-08 | 56 |
neural rod | 2.37e-08 | 56 |
future spinal cord | 2.37e-08 | 56 |
neural keel | 2.37e-08 | 56 |
limbic system | 1.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.48e-10 | 14 |